RNA–Protein interactions for RNA: ENST00000510599.5

UBE2D3-230, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-230ENST00000510599 ABL1P00519 1130 aa6.93□□□□□ -1.3
UBE2D3-230ENST00000510599 C8AP07357 584 aa6.93□□□□□ -1.3
UBE2D3-230ENST00000510599 ASPAP45381 313 aa6.93□□□□□ -1.3
UBE2D3-230ENST00000510599 COL19A1Q14993 1142 aa6.93□□□□□ -1.3
UBE2D3-230ENST00000510599 SPRED3Q2MJR0 410 aa6.93□□□□□ -1.3
UBE2D3-230ENST00000510599 STK11IPQ8N1F8 1099 aa6.93□□□□□ -1.3
UBE2D3-230ENST00000510599 SLC5A6Q9Y289 635 aa6.93□□□□□ -1.3
UBE2D3-230ENST00000510599 DAGLAQ9Y4D2 1042 aa6.93□□□□□ -1.3
UBE2D3-230ENST00000510599 TOP2BQ02880 1626 aa6.93□□□□□ -1.3
UBE2D3-230ENST00000510599 CC2D2AQ9P2K1 1620 aa6.93□□□□□ -1.3
UBE2D3-230ENST00000510599 PPP1R15AO75807 674 aaPredicted RBP6.92□□□□□ -1.3
UBE2D3-230ENST00000510599 NEFLP07196 543 aa6.92□□□□□ -1.3
UBE2D3-230ENST00000510599 PDE3AQ14432 1141 aa6.92□□□□□ -1.3
UBE2D3-230ENST00000510599 LCE1DQ5T752 114 aa6.92□□□□□ -1.3
UBE2D3-230ENST00000510599 TRIM56Q9BRZ2 755 aaKnown RBP6.92□□□□□ -1.3
UBE2D3-230ENST00000510599 GSX1Q9H4S2 264 aaPredicted RBP6.92□□□□□ -1.3
UBE2D3-230ENST00000510599 ZNF211Q13398 564 aaPredicted RBP6.91□□□□□ -1.3
UBE2D3-230ENST00000510599 CYP27C1Q4G0S4 372 aa6.91□□□□□ -1.3
UBE2D3-230ENST00000510599 SEZ6L2Q6UXD5 910 aa6.91□□□□□ -1.3
UBE2D3-230ENST00000510599 BCL7CQ8WUZ0 217 aaPredicted RBP6.91□□□□□ -1.3
UBE2D3-230ENST00000510599 MISP3Q96FF7 219 aa6.91□□□□□ -1.3
UBE2D3-230ENST00000510599 ZNF576Q9H609 170 aa6.91□□□□□ -1.3
UBE2D3-230ENST00000510599 BIN1O00499 593 aa6.9□□□□□ -1.3
UBE2D3-230ENST00000510599 AOC2O75106 756 aa6.9□□□□□ -1.3
UBE2D3-230ENST00000510599 ECEL1O95672 775 aa6.9□□□□□ -1.3
UBE2D3-230ENST00000510599 HNRNPUQ00839 825 aaKnown RBP eCLIP6.9□□□□□ -1.3
UBE2D3-230ENST00000510599 AP3B2Q13367 1082 aa6.9□□□□□ -1.3
UBE2D3-230ENST00000510599 PLCL1Q15111 1095 aa6.9□□□□□ -1.3
UBE2D3-230ENST00000510599 KIAA0319Q5VV43 1072 aa6.9□□□□□ -1.3
UBE2D3-230ENST00000510599 OGFOD3Q6PK18 319 aa6.9□□□□□ -1.3
UBE2D3-230ENST00000510599 ANO2Q9NQ90 1003 aa6.9□□□□□ -1.3
UBE2D3-230ENST00000510599 C1GALT1Q9NS00 363 aa6.9□□□□□ -1.3
UBE2D3-230ENST00000510599 SYNGAP1Q96PV0 1343 aa6.9□□□□□ -1.3
UBE2D3-230ENST00000510599 KIF21BO75037 1637 aa6.9□□□□□ -1.31
UBE2D3-230ENST00000510599 ARID3CA6NKF2 412 aa6.89□□□□□ -1.31
UBE2D3-230ENST00000510599 PAPLNO95428 1278 aa6.89□□□□□ -1.31
UBE2D3-230ENST00000510599 ITPKAP23677 461 aa6.89□□□□□ -1.31
UBE2D3-230ENST00000510599 WDR18Q9BV38 432 aa6.89□□□□□ -1.31
UBE2D3-230ENST00000510599 EHD4Q9H223 541 aa6.89□□□□□ -1.31
UBE2D3-230ENST00000510599 BRPF3Q9ULD4 1205 aa6.89□□□□□ -1.31
UBE2D3-230ENST00000510599 CFTRP13569 1480 aa6.89□□□□□ -1.31
UBE2D3-230ENST00000510599 DYNC1LI2O43237 492 aaPredicted RBP6.88□□□□□ -1.31
UBE2D3-230ENST00000510599 ZNF792Q3KQV3 632 aa6.88□□□□□ -1.31
UBE2D3-230ENST00000510599 PHLDB3Q6NSJ2 640 aa6.88□□□□□ -1.31
UBE2D3-230ENST00000510599 ZNF574Q6ZN55 896 aaPredicted RBP6.88□□□□□ -1.31
UBE2D3-230ENST00000510599 FAM9AQ8IZU1 332 aaPredicted RBP6.88□□□□□ -1.31
UBE2D3-230ENST00000510599 PIDD1Q9HB75 910 aa6.88□□□□□ -1.31
UBE2D3-230ENST00000510599 EGFL7Q9UHF1 273 aa6.88□□□□□ -1.31
UBE2D3-230ENST00000510599 PTPN12Q05209 780 aaKnown RBP6.87□□□□□ -1.31
UBE2D3-230ENST00000510599 CCDC82Q8N4S0 544 aa6.87□□□□□ -1.31
UBE2D3-230ENST00000510599 LGR6Q9HBX8 967 aa6.87□□□□□ -1.31
UBE2D3-230ENST00000510599 NPHS2Q9NP85 383 aa6.87□□□□□ -1.31
UBE2D3-230ENST00000510599 TMPRSS2O15393 492 aa6.86□□□□□ -1.31
UBE2D3-230ENST00000510599 NDUFB5O43674 189 aa6.86□□□□□ -1.31
UBE2D3-230ENST00000510599 CPNE3O75131 537 aaKnown RBP6.86□□□□□ -1.31
UBE2D3-230ENST00000510599 USPL1Q5W0Q7 1092 aa6.86□□□□□ -1.31
UBE2D3-230ENST00000510599 NETO1Q8TDF5 533 aa6.86□□□□□ -1.31
UBE2D3-230ENST00000510599 KRTAP4-7Q9BYR0 210 aa6.86□□□□□ -1.31
UBE2D3-230ENST00000510599 ATXN3LQ9H3M9 355 aa6.86□□□□□ -1.31
UBE2D3-230ENST00000510599 PPP1R9AQ9ULJ8 1098 aa6.86□□□□□ -1.31
UBE2D3-230ENST00000510599 SOGA1O94964 1423 aa6.85□□□□□ -1.31
UBE2D3-230ENST00000510599 H3BRB1 525 aa6.85□□□□□ -1.31
UBE2D3-230ENST00000510599 ICMTO60725 284 aa6.85□□□□□ -1.31
UBE2D3-230ENST00000510599 PDE3BQ13370 1112 aa6.85□□□□□ -1.31
UBE2D3-230ENST00000510599 B4GALNT3Q6L9W6 998 aa6.85□□□□□ -1.31
UBE2D3-230ENST00000510599 SPRED2Q7Z698 418 aa6.85□□□□□ -1.31
UBE2D3-230ENST00000510599 WFDC3Q8IUB2 231 aa6.85□□□□□ -1.31
UBE2D3-230ENST00000510599 GLYCTKQ8IVS8 523 aa6.85□□□□□ -1.31
UBE2D3-230ENST00000510599 TUT1Q9H6E5 874 aaKnown RBP6.85□□□□□ -1.31
UBE2D3-230ENST00000510599 CRIM1Q9NZV1 1036 aa6.85□□□□□ -1.31
UBE2D3-230ENST00000510599 SLFN14P0C7P3 912 aa6.84□□□□□ -1.31
UBE2D3-230ENST00000510599 FAM87AP0C7U9 286 aa6.84□□□□□ -1.31
UBE2D3-230ENST00000510599 ID3Q02535 119 aa6.84□□□□□ -1.31
UBE2D3-230ENST00000510599 CDK5R2Q13319 367 aa6.84□□□□□ -1.31
UBE2D3-230ENST00000510599 RPS26P11Q5JNZ5 115 aaPredicted RBP6.84□□□□□ -1.31
UBE2D3-230ENST00000510599 PRPF40BQ6NWY9 871 aaKnown RBP6.84□□□□□ -1.31
UBE2D3-230ENST00000510599 ATG4DQ86TL0 474 aaPredicted RBP6.84□□□□□ -1.31
UBE2D3-230ENST00000510599 ABCB6Q9NP58 842 aa6.84□□□□□ -1.31
UBE2D3-230ENST00000510599 RUSC2Q8N2Y8 1516 aa6.84□□□□□ -1.31
UBE2D3-230ENST00000510599 GOLGA3Q08378 1498 aa6.84□□□□□ -1.31
UBE2D3-230ENST00000510599 TNIKQ9UKE5 1360 aa6.83□□□□□ -1.32
UBE2D3-230ENST00000510599 CUX1P39880 1505 aa6.83□□□□□ -1.32
UBE2D3-230ENST00000510599 LIG1P18858 919 aa6.83□□□□□ -1.32
UBE2D3-230ENST00000510599 FUT4P22083 530 aa6.83□□□□□ -1.32
UBE2D3-230ENST00000510599 ORC1Q13415 861 aa6.83□□□□□ -1.32
UBE2D3-230ENST00000510599 ARHGAP27Q6ZUM4 889 aa6.83□□□□□ -1.32
UBE2D3-230ENST00000510599 PLD6Q8N2A8 252 aaKnown RBP6.83□□□□□ -1.32
UBE2D3-230ENST00000510599 FANCD2OSQ96PS1 177 aa6.83□□□□□ -1.32
UBE2D3-230ENST00000510599 RC3H2Q9HBD1 1191 aaKnown RBP6.83□□□□□ -1.32
UBE2D3-230ENST00000510599 TRAK1Q9UPV9 953 aa6.83□□□□□ -1.32
UBE2D3-230ENST00000510599 CEP164Q9UPV0 1460 aa6.83□□□□□ -1.32
UBE2D3-230ENST00000510599 TRIM26Q12899 539 aaPredicted RBP6.82□□□□□ -1.32
UBE2D3-230ENST00000510599 BNIP3Q12983 259 aa6.82□□□□□ -1.32
UBE2D3-230ENST00000510599 ZNF648Q5T619 568 aaPredicted RBP6.82□□□□□ -1.32
UBE2D3-230ENST00000510599 SMYD4Q8IYR2 804 aaPredicted RBP6.82□□□□□ -1.32
UBE2D3-230ENST00000510599 FAM181AQ8N9Y4 354 aa6.82□□□□□ -1.32
UBE2D3-230ENST00000510599 FAM129BQ96TA1 746 aa6.82□□□□□ -1.32
UBE2D3-230ENST00000510599 CCDC86Q9H6F5 360 aaKnown RBP6.82□□□□□ -1.32
UBE2D3-230ENST00000510599 KRT82Q9NSB4 513 aa6.82□□□□□ -1.32
UBE2D3-230ENST00000510599 VAV3Q9UKW4 847 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms