RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 NSUN4Q96CB9 384 aaKnown RBP16.65■□□□□ 0.26
SNF8-206ENST00000509989 KIF1BPQ96EK5 621 aa16.65■□□□□ 0.26
SNF8-206ENST00000509989 EDC3Q96F86 508 aaKnown RBP16.65■□□□□ 0.26
SNF8-206ENST00000509989 CLMNQ96JQ2 1002 aa16.65■□□□□ 0.26
SNF8-206ENST00000509989 FAM198AQ9UFP1 575 aa16.65■□□□□ 0.26
SNF8-206ENST00000509989 ANGEL1Q9UNK9 670 aaKnown RBP16.65■□□□□ 0.26
SNF8-206ENST00000509989 MAST3O60307 1309 aa16.65■□□□□ 0.26
SNF8-206ENST00000509989 USP2O75604 605 aaPredicted RBP16.64■□□□□ 0.25
SNF8-206ENST00000509989 TCP10Q12799 353 aa16.64■□□□□ 0.25
SNF8-206ENST00000509989 ERICH6Q7L0X2 663 aa16.64■□□□□ 0.25
SNF8-206ENST00000509989 DZIP1Q86YF9 867 aaKnown RBP16.64■□□□□ 0.25
SNF8-206ENST00000509989 CHMP4BQ9H444 224 aaKnown RBP16.64■□□□□ 0.25
SNF8-206ENST00000509989 DCTPP1Q9H773 170 aa16.64■□□□□ 0.25
SNF8-206ENST00000509989 USP40Q9NVE5 1235 aa16.64■□□□□ 0.25
SNF8-206ENST00000509989 RAI14Q9P0K7 980 aa16.64■□□□□ 0.25
SNF8-206ENST00000509989 FOCADQ5VW36 1801 aa16.63■□□□□ 0.25
SNF8-206ENST00000509989 FOXN1O15353 648 aa16.63■□□□□ 0.25
SNF8-206ENST00000509989 BTDP43251 543 aa16.63■□□□□ 0.25
SNF8-206ENST00000509989 ZNF157P51786 506 aaPredicted RBP16.63■□□□□ 0.25
SNF8-206ENST00000509989 MKRN3Q13064 507 aaKnown RBP16.63■□□□□ 0.25
SNF8-206ENST00000509989 HSP90AB4PQ58FF6 505 aa16.63■□□□□ 0.25
SNF8-206ENST00000509989 RASAL3Q86YV0 1011 aa16.63■□□□□ 0.25
SNF8-206ENST00000509989 HHIPL1Q96JK4 782 aa16.63■□□□□ 0.25
SNF8-206ENST00000509989 ZNF512BQ96KM6 892 aaPredicted RBP16.63■□□□□ 0.25
SNF8-206ENST00000509989 DDX4Q9NQI0 724 aaKnown RBP16.63■□□□□ 0.25
SNF8-206ENST00000509989 MROH7-TTC4A0A0A0MT08 1334 aa16.63■□□□□ 0.25
SNF8-206ENST00000509989 RFX7Q2KHR2 1363 aa16.63■□□□□ 0.25
SNF8-206ENST00000509989 SIPA1L1O43166 1804 aa16.62■□□□□ 0.25
SNF8-206ENST00000509989 RAB11FIP3O75154 756 aa16.62■□□□□ 0.25
SNF8-206ENST00000509989 CHGBP05060 677 aa16.62■□□□□ 0.25
SNF8-206ENST00000509989 RHBDL3P58872 404 aa16.62■□□□□ 0.25
SNF8-206ENST00000509989 SLFNL1Q499Z3 407 aa16.62■□□□□ 0.25
SNF8-206ENST00000509989 LDLRAD1Q5T700 205 aa16.62■□□□□ 0.25
SNF8-206ENST00000509989 SH3BP5LQ7L8J4 393 aa16.62■□□□□ 0.25
SNF8-206ENST00000509989 WBP1LQ9NX94 342 aa16.62■□□□□ 0.25
SNF8-206ENST00000509989 TSKSQ9UJT2 592 aa16.62■□□□□ 0.25
SNF8-206ENST00000509989 MYH7P12883 1935 aa16.62■□□□□ 0.25
SNF8-206ENST00000509989 SLC10A3P09131 477 aa16.61■□□□□ 0.25
SNF8-206ENST00000509989 KIF23Q02241 960 aaPredicted RBP16.61■□□□□ 0.25
SNF8-206ENST00000509989 TSHZ3Q63HK5 1081 aa16.61■□□□□ 0.25
SNF8-206ENST00000509989 CLASRPQ8N2M8 674 aaKnown RBP16.61■□□□□ 0.25
SNF8-206ENST00000509989 ZGPATQ8N5A5 531 aaKnown RBP16.61■□□□□ 0.25
SNF8-206ENST00000509989 OTUD7AQ8TE49 926 aaPredicted RBP16.61■□□□□ 0.25
SNF8-206ENST00000509989 FAM163AQ96GL9 167 aaPredicted RBP16.61■□□□□ 0.25
SNF8-206ENST00000509989 LRP2BPQ9P2M1 347 aa16.61■□□□□ 0.25
SNF8-206ENST00000509989 PPP2R3BQ9Y5P8 575 aa16.61■□□□□ 0.25
SNF8-206ENST00000509989 GPR75-ASB3A0A0A6YYF3 556 aa16.6■□□□□ 0.25
SNF8-206ENST00000509989 WDHD1O75717 1129 aaPredicted RBP16.6■□□□□ 0.25
SNF8-206ENST00000509989 GJA5P36382 358 aa16.6■□□□□ 0.25
SNF8-206ENST00000509989 ECE1P42892 770 aa16.6■□□□□ 0.25
SNF8-206ENST00000509989 RGS3P49796 1198 aa16.6■□□□□ 0.25
SNF8-206ENST00000509989 FKBP1BP68106 108 aa16.6■□□□□ 0.25
SNF8-206ENST00000509989 SPTY2D1Q68D10 685 aaPredicted RBP16.6■□□□□ 0.25
SNF8-206ENST00000509989 CNKSR2Q8WXI2 1034 aa16.6■□□□□ 0.25
SNF8-206ENST00000509989 LRRCC1Q9C099 1032 aa16.6■□□□□ 0.25
SNF8-206ENST00000509989 LAMB1P07942 1786 aa16.59■□□□□ 0.25
SNF8-206ENST00000509989 IFIT2P09913 472 aaKnown RBP16.59■□□□□ 0.25
SNF8-206ENST00000509989 NF2P35240 595 aa16.59■□□□□ 0.25
SNF8-206ENST00000509989 DYNLL1P63167 89 aaKnown RBP16.59■□□□□ 0.25
SNF8-206ENST00000509989 TNFAIP1Q13829 316 aa16.59■□□□□ 0.25
SNF8-206ENST00000509989 MAP3K11Q16584 847 aa16.59■□□□□ 0.25
SNF8-206ENST00000509989 MIGA2Q7L4E1 593 aa16.59■□□□□ 0.25
SNF8-206ENST00000509989 SH3RF3Q8TEJ3 882 aaPredicted RBP16.59■□□□□ 0.25
SNF8-206ENST00000509989 BOLA2Q9H3K6 86 aa16.59■□□□□ 0.25
SNF8-206ENST00000509989 CASP8AP2Q9UKL3 1982 aa16.58■□□□□ 0.25
SNF8-206ENST00000509989 DDTLA6NHG4 134 aaPredicted RBP16.58■□□□□ 0.24
SNF8-206ENST00000509989 TNNI2P48788 182 aa16.58■□□□□ 0.24
SNF8-206ENST00000509989 PICALMQ13492 652 aa16.58■□□□□ 0.24
SNF8-206ENST00000509989 FKBP1CQ5VVH2 108 aa16.58■□□□□ 0.24
SNF8-206ENST00000509989 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.58■□□□□ 0.24
SNF8-206ENST00000509989 ARMC9Q7Z3E5 817 aa16.58■□□□□ 0.24
SNF8-206ENST00000509989 FAM83AQ86UY5 434 aa16.58■□□□□ 0.24
SNF8-206ENST00000509989 FAM151AQ8WW52 585 aa16.58■□□□□ 0.24
SNF8-206ENST00000509989 DNAJC2Q99543 621 aaKnown RBP16.58■□□□□ 0.24
SNF8-206ENST00000509989 AATFQ9NY61 560 aaKnown RBP eCLIP16.58■□□□□ 0.24
SNF8-206ENST00000509989 TMOD2Q9NZR1 351 aa16.58■□□□□ 0.24
SNF8-206ENST00000509989 MYH1P12882 1939 aa16.58■□□□□ 0.24
SNF8-206ENST00000509989 ATRNL1Q5VV63 1379 aa16.57■□□□□ 0.24
SNF8-206ENST00000509989 IDH1O75874 414 aaKnown RBP16.57■□□□□ 0.24
SNF8-206ENST00000509989 IGHDP01880 384 aa16.57■□□□□ 0.24
SNF8-206ENST00000509989 MAP2K2P36507 400 aa16.57■□□□□ 0.24
SNF8-206ENST00000509989 SUPT20HL1Q3ZLR7 823 aa16.57■□□□□ 0.24
SNF8-206ENST00000509989 NAA16Q6N069 864 aaPredicted RBP16.57■□□□□ 0.24
SNF8-206ENST00000509989 CSRNP1Q96S65 589 aa16.57■□□□□ 0.24
SNF8-206ENST00000509989 IDI2Q9BXS1 227 aa16.57■□□□□ 0.24
SNF8-206ENST00000509989 GOLIM4O00461 696 aa16.56■□□□□ 0.24
SNF8-206ENST00000509989 NOGQ13253 232 aa16.56■□□□□ 0.24
SNF8-206ENST00000509989 COL13A1Q5TAT6 717 aaPredicted RBP16.56■□□□□ 0.24
SNF8-206ENST00000509989 MAGEB6Q8N7X4 407 aa16.56■□□□□ 0.24
SNF8-206ENST00000509989 MIGA1Q8NAN2 632 aa16.56■□□□□ 0.24
SNF8-206ENST00000509989 ZKSCAN4Q969J2 545 aaPredicted RBP16.56■□□□□ 0.24
SNF8-206ENST00000509989 CCDC102AQ96A19 550 aa16.56■□□□□ 0.24
SNF8-206ENST00000509989 ELP3Q9H9T3 547 aa16.56■□□□□ 0.24
SNF8-206ENST00000509989 RPAP1Q9BWH6 1393 aaPredicted RBP16.55■□□□□ 0.24
SNF8-206ENST00000509989 ATAD5Q96QE3 1844 aa16.55■□□□□ 0.24
SNF8-206ENST00000509989 FAM196BA6NMK8 535 aa16.55■□□□□ 0.24
SNF8-206ENST00000509989 PPP1R12BO60237 982 aaPredicted RBP16.55■□□□□ 0.24
SNF8-206ENST00000509989 HSPA8P11142 646 aaKnown RBP16.55■□□□□ 0.24
SNF8-206ENST00000509989 ATP5JP18859 108 aa16.55■□□□□ 0.24
SNF8-206ENST00000509989 CYP7A1P22680 504 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 132.3 ms