RNA–Protein interactions for RNA: ENST00000508659.5

CLDND1-219, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 681 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-219ENST00000508659 LRP2BPQ9P2M1 347 aa20.74■□□□□ 0.91
CLDND1-219ENST00000508659 ANGEL1Q9UNK9 670 aaKnown RBP20.74■□□□□ 0.91
CLDND1-219ENST00000508659 MROH7-TTC4A0A0A0MT08 1334 aa20.74■□□□□ 0.91
CLDND1-219ENST00000508659 RPAP1Q9BWH6 1393 aaPredicted RBP20.73■□□□□ 0.91
CLDND1-219ENST00000508659 MAST2Q6P0Q8 1798 aa20.73■□□□□ 0.91
CLDND1-219ENST00000508659 UBE2Q2LH0YL09 131 aa20.73■□□□□ 0.91
CLDND1-219ENST00000508659 IFIT2P09913 472 aaKnown RBP20.73■□□□□ 0.91
CLDND1-219ENST00000508659 GSTO1P78417 241 aa20.73■□□□□ 0.91
CLDND1-219ENST00000508659 RASAL3Q86YV0 1011 aa20.73■□□□□ 0.91
CLDND1-219ENST00000508659 CRBNQ96SW2 442 aa20.73■□□□□ 0.91
CLDND1-219ENST00000508659 CDC42EP5Q6NZY7 148 aa20.72■□□□□ 0.91
CLDND1-219ENST00000508659 FAM83AQ86UY5 434 aa20.72■□□□□ 0.91
CLDND1-219ENST00000508659 BEGAINQ9BUH8 593 aa20.72■□□□□ 0.91
CLDND1-219ENST00000508659 FZD1Q9UP38 647 aa20.72■□□□□ 0.91
CLDND1-219ENST00000508659 FAM155AB1AL88 458 aaPredicted RBP20.71■□□□□ 0.91
CLDND1-219ENST00000508659 BTDP43251 543 aa20.71■□□□□ 0.91
CLDND1-219ENST00000508659 CDAN1Q8IWY9 1227 aa20.71■□□□□ 0.91
CLDND1-219ENST00000508659 NSUN4Q96CB9 384 aaKnown RBP20.71■□□□□ 0.91
CLDND1-219ENST00000508659 TEPSINQ96N21 525 aa20.71■□□□□ 0.91
CLDND1-219ENST00000508659 LRRCC1Q9C099 1032 aa20.71■□□□□ 0.91
CLDND1-219ENST00000508659 USP40Q9NVE5 1235 aa20.71■□□□□ 0.91
CLDND1-219ENST00000508659 WBP1LQ9NX94 342 aa20.71■□□□□ 0.91
CLDND1-219ENST00000508659 CYP2E1P05181 493 aaPredicted RBP20.7■□□□□ 0.9
CLDND1-219ENST00000508659 ZAP70P43403 619 aa20.7■□□□□ 0.9
CLDND1-219ENST00000508659 IREB2P48200 963 aaKnown RBP20.7■□□□□ 0.9
CLDND1-219ENST00000508659 FAM163AQ96GL9 167 aaPredicted RBP20.7■□□□□ 0.9
CLDND1-219ENST00000508659 LDHCP07864 332 aa20.69■□□□□ 0.9
CLDND1-219ENST00000508659 NFIAQ12857 509 aa20.69■□□□□ 0.9
CLDND1-219ENST00000508659 MAP3K11Q16584 847 aa20.69■□□□□ 0.9
CLDND1-219ENST00000508659 HOOK2Q96ED9 719 aa20.69■□□□□ 0.9
CLDND1-219ENST00000508659 RFX7Q2KHR2 1363 aa20.69■□□□□ 0.9
CLDND1-219ENST00000508659 TCP10Q12799 353 aa20.68■□□□□ 0.9
CLDND1-219ENST00000508659 NAA16Q6N069 864 aaPredicted RBP20.68■□□□□ 0.9
CLDND1-219ENST00000508659 ZNF384Q8TF68 577 aa20.68■□□□□ 0.9
CLDND1-219ENST00000508659 FAM151AQ8WW52 585 aa20.68■□□□□ 0.9
CLDND1-219ENST00000508659 NOL10Q9BSC4 688 aaKnown RBP20.68■□□□□ 0.9
CLDND1-219ENST00000508659 PCDHB15Q9Y5E8 787 aa20.68■□□□□ 0.9
CLDND1-219ENST00000508659 MYH2Q9UKX2 1941 aa20.67■□□□□ 0.9
CLDND1-219ENST00000508659 GPR75-ASB3A0A0A6YYF3 556 aa20.67■□□□□ 0.9
CLDND1-219ENST00000508659 IGSF3O75054 1194 aa20.67■□□□□ 0.9
CLDND1-219ENST00000508659 LDLRAD1Q5T700 205 aa20.67■□□□□ 0.9
CLDND1-219ENST00000508659 NDUFB9Q9Y6M9 179 aa20.67■□□□□ 0.9
CLDND1-219ENST00000508659 UNCXA6NJT0 531 aa20.66■□□□□ 0.9
CLDND1-219ENST00000508659 FOXN1O15353 648 aa20.66■□□□□ 0.9
CLDND1-219ENST00000508659 IDH1O75874 414 aaKnown RBP20.66■□□□□ 0.9
CLDND1-219ENST00000508659 ANKRD13AQ8IZ07 590 aa20.66■□□□□ 0.9
CLDND1-219ENST00000508659 ZIC5Q96T25 663 aa20.66■□□□□ 0.9
CLDND1-219ENST00000508659 DCTPP1Q9H773 170 aa20.66■□□□□ 0.9
CLDND1-219ENST00000508659 PIH1D3Q9NQM4 214 aaKnown RBP20.66■□□□□ 0.9
CLDND1-219ENST00000508659 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.66■□□□□ 0.9
CLDND1-219ENST00000508659 AKAP11Q9UKA4 1901 aa20.66■□□□□ 0.9
CLDND1-219ENST00000508659 CA12O43570 354 aa20.65■□□□□ 0.9
CLDND1-219ENST00000508659 CTCFP49711 727 aaPredicted RBP20.65■□□□□ 0.9
CLDND1-219ENST00000508659 RGS3P49796 1198 aa20.65■□□□□ 0.9
CLDND1-219ENST00000508659 KIF23Q02241 960 aaPredicted RBP20.65■□□□□ 0.9
CLDND1-219ENST00000508659 PICALMQ13492 652 aa20.65■□□□□ 0.9
CLDND1-219ENST00000508659 DCAF15Q66K64 600 aa20.65■□□□□ 0.9
CLDND1-219ENST00000508659 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.65■□□□□ 0.9
CLDND1-219ENST00000508659 IDI2Q9BXS1 227 aa20.65■□□□□ 0.9
CLDND1-219ENST00000508659 FAM198AQ9UFP1 575 aa20.65■□□□□ 0.9
CLDND1-219ENST00000508659 SMARCA5O60264 1052 aaPredicted RBP20.64■□□□□ 0.89
CLDND1-219ENST00000508659 ENTPD3O75355 529 aa20.64■□□□□ 0.89
CLDND1-219ENST00000508659 USP2O75604 605 aaPredicted RBP20.64■□□□□ 0.89
CLDND1-219ENST00000508659 MKRN3Q13064 507 aaKnown RBP20.64■□□□□ 0.89
CLDND1-219ENST00000508659 SLC10A4Q96EP9 437 aa20.64■□□□□ 0.89
CLDND1-219ENST00000508659 CLMNQ96JQ2 1002 aa20.64■□□□□ 0.89
CLDND1-219ENST00000508659 DNAJC2Q99543 621 aaKnown RBP20.64■□□□□ 0.89
CLDND1-219ENST00000508659 OTOFQ9HC10 1997 aa20.63■□□□□ 0.89
CLDND1-219ENST00000508659 WDHD1O75717 1129 aaPredicted RBP20.63■□□□□ 0.89
CLDND1-219ENST00000508659 BAG3O95817 575 aa20.63■□□□□ 0.89
CLDND1-219ENST00000508659 MAP4K4O95819 1239 aaPredicted RBP20.63■□□□□ 0.89
CLDND1-219ENST00000508659 MAP3K12Q12852 859 aa20.63■□□□□ 0.89
CLDND1-219ENST00000508659 AAMPQ13685 434 aa20.63■□□□□ 0.89
CLDND1-219ENST00000508659 TTF1Q15361 905 aaPredicted RBP20.63■□□□□ 0.89
CLDND1-219ENST00000508659 REM2Q8IYK8 340 aaPredicted RBP20.63■□□□□ 0.89
CLDND1-219ENST00000508659 ANTXR1Q9H6X2 564 aa20.63■□□□□ 0.89
CLDND1-219ENST00000508659 PLCG2P16885 1265 aa20.62■□□□□ 0.89
CLDND1-219ENST00000508659 RHBDL3P58872 404 aa20.62■□□□□ 0.89
CLDND1-219ENST00000508659 ZSCAN29Q8IWY8 852 aaPredicted RBP20.62■□□□□ 0.89
CLDND1-219ENST00000508659 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.62■□□□□ 0.89
CLDND1-219ENST00000508659 GPATCH3Q96I76 525 aa20.62■□□□□ 0.89
CLDND1-219ENST00000508659 WRNIP1Q96S55 665 aa20.62■□□□□ 0.89
CLDND1-219ENST00000508659 CSRNP1Q96S65 589 aa20.62■□□□□ 0.89
CLDND1-219ENST00000508659 AATFQ9NY61 560 aaKnown RBP eCLIP20.62■□□□□ 0.89
CLDND1-219ENST00000508659 CSADQ9Y600 493 aa20.62■□□□□ 0.89
CLDND1-219ENST00000508659 GOLIM4O00461 696 aa20.61■□□□□ 0.89
CLDND1-219ENST00000508659 ZBTB48P10074 688 aaPredicted RBP20.61■□□□□ 0.89
CLDND1-219ENST00000508659 CYP7A1P22680 504 aa20.61■□□□□ 0.89
CLDND1-219ENST00000508659 SREBF2Q12772 1141 aa20.61■□□□□ 0.89
CLDND1-219ENST00000508659 VGLL4Q14135 290 aa20.61■□□□□ 0.89
CLDND1-219ENST00000508659 SPRYD7Q5W111 196 aa20.61■□□□□ 0.89
CLDND1-219ENST00000508659 TMED8Q6PL24 325 aaPredicted RBP20.61■□□□□ 0.89
CLDND1-219ENST00000508659 ADGRA1Q86SQ6 560 aa20.61■□□□□ 0.89
CLDND1-219ENST00000508659 TEX11Q8IYF3 940 aa20.61■□□□□ 0.89
CLDND1-219ENST00000508659 MAGEB6Q8N7X4 407 aa20.61■□□□□ 0.89
CLDND1-219ENST00000508659 ZNF341Q9BYN7 854 aa20.61■□□□□ 0.89
CLDND1-219ENST00000508659 ELP3Q9H9T3 547 aa20.61■□□□□ 0.89
CLDND1-219ENST00000508659 DDX4Q9NQI0 724 aaKnown RBP20.61■□□□□ 0.89
CLDND1-219ENST00000508659 SUPT16HQ9Y5B9 1047 aaKnown RBP20.61■□□□□ 0.89
CLDND1-219ENST00000508659 HSPA8P11142 646 aaKnown RBP20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms