RNA–Protein interactions for RNA: ENST00000506080.5

PTPN20-216, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN20, Length 1,401 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-216ENST00000506080 SLC9C1Q4G0N8 1177 aa11.72□□□□□ -0.53
PTPN20-216ENST00000506080 ZNF333Q96JL9 665 aa11.72□□□□□ -0.53
PTPN20-216ENST00000506080 CCL15-CCL14A0A0B4J2E2 113 aa11.71□□□□□ -0.53
PTPN20-216ENST00000506080 FKBP1AP62942 108 aaKnown RBP11.71□□□□□ -0.53
PTPN20-216ENST00000506080 IFIT5Q13325 482 aaKnown RBP11.71□□□□□ -0.53
PTPN20-216ENST00000506080 FKBP5Q13451 457 aaPredicted RBP11.71□□□□□ -0.53
PTPN20-216ENST00000506080 TAF1CQ15572 869 aaPredicted RBP11.71□□□□□ -0.53
PTPN20-216ENST00000506080 CCL15Q16663 113 aa11.71□□□□□ -0.53
PTPN20-216ENST00000506080 DNAAF4Q8WXU2 420 aa11.71□□□□□ -0.53
PTPN20-216ENST00000506080 BRI3BPQ8WY22 251 aa11.71□□□□□ -0.53
PTPN20-216ENST00000506080 TDRD3Q9H7E2 651 aaKnown RBP11.71□□□□□ -0.53
PTPN20-216ENST00000506080 ZFYVE28Q9HCC9 887 aa11.71□□□□□ -0.53
PTPN20-216ENST00000506080 ZNF70Q9UC06 446 aaPredicted RBP11.71□□□□□ -0.53
PTPN20-216ENST00000506080 TCP10L2B9ZVM9 353 aa11.7□□□□□ -0.54
PTPN20-216ENST00000506080 FOXO4P98177 505 aa11.7□□□□□ -0.54
PTPN20-216ENST00000506080 TNFAIP1Q13829 316 aa11.7□□□□□ -0.54
PTPN20-216ENST00000506080 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.7□□□□□ -0.54
PTPN20-216ENST00000506080 NBPF11Q86T75 865 aa11.7□□□□□ -0.54
PTPN20-216ENST00000506080 LINS1Q8NG48 757 aa11.7□□□□□ -0.54
PTPN20-216ENST00000506080 ZNF594Q96JF6 807 aaPredicted RBP11.7□□□□□ -0.54
PTPN20-216ENST00000506080 PRKRIP1Q9H875 184 aaPredicted RBP11.7□□□□□ -0.54
PTPN20-216ENST00000506080 TTF2Q9UNY4 1162 aaKnown RBP11.7□□□□□ -0.54
PTPN20-216ENST00000506080 OTOFQ9HC10 1997 aa11.7□□□□□ -0.54
PTPN20-216ENST00000506080 BRCA2P51587 3418 aa11.7□□□□□ -0.54
PTPN20-216ENST00000506080 VGLL4Q14135 290 aa11.69□□□□□ -0.54
PTPN20-216ENST00000506080 ARHGEF6Q15052 776 aa11.69□□□□□ -0.54
PTPN20-216ENST00000506080 TAF7LQ5H9L4 462 aa11.69□□□□□ -0.54
PTPN20-216ENST00000506080 MFSD14BQ5SR56 506 aa11.69□□□□□ -0.54
PTPN20-216ENST00000506080 FAM43AQ8N2R8 423 aa11.69□□□□□ -0.54
PTPN20-216ENST00000506080 SH3TC2Q8TF17 1288 aa11.69□□□□□ -0.54
PTPN20-216ENST00000506080 TEPSINQ96N21 525 aa11.69□□□□□ -0.54
PTPN20-216ENST00000506080 TMEM39BQ9GZU3 492 aa11.69□□□□□ -0.54
PTPN20-216ENST00000506080 GTF2A2P52657 109 aa11.69□□□□□ -0.54
PTPN20-216ENST00000506080 MAP3K9P80192 1104 aa11.69□□□□□ -0.54
PTPN20-216ENST00000506080 LMBR1LQ6UX01 489 aa11.69□□□□□ -0.54
PTPN20-216ENST00000506080 LDHAL6AQ6ZMR3 332 aa11.69□□□□□ -0.54
PTPN20-216ENST00000506080 ARHGAP39Q9C0H5 1083 aa11.69□□□□□ -0.54
PTPN20-216ENST00000506080 CNNM1Q9NRU3 951 aa11.69□□□□□ -0.54
PTPN20-216ENST00000506080 CSADQ9Y600 493 aa11.69□□□□□ -0.54
PTPN20-216ENST00000506080 A0A1B0GUL6 1792 aa11.68□□□□□ -0.54
PTPN20-216ENST00000506080 H0YGN5 161 aa11.68□□□□□ -0.54
PTPN20-216ENST00000506080 GYG1P46976 350 aa11.68□□□□□ -0.54
PTPN20-216ENST00000506080 CCDC57Q2TAC2 916 aa11.68□□□□□ -0.54
PTPN20-216ENST00000506080 EPHA10Q5JZY3 1008 aa11.68□□□□□ -0.54
PTPN20-216ENST00000506080 DZIP1LQ8IYY4 767 aaKnown RBP11.68□□□□□ -0.54
PTPN20-216ENST00000506080 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.68□□□□□ -0.54
PTPN20-216ENST00000506080 SERPINA10Q9UK55 444 aa11.68□□□□□ -0.54
PTPN20-216ENST00000506080 FAM205AQ6ZU69 1335 aa11.67□□□□□ -0.54
PTPN20-216ENST00000506080 F6X3S4 739 aa11.67□□□□□ -0.54
PTPN20-216ENST00000506080 NUDT7P0C024 238 aa11.67□□□□□ -0.54
PTPN20-216ENST00000506080 CRKP46108 304 aa11.67□□□□□ -0.54
PTPN20-216ENST00000506080 TNNI2P48788 182 aa11.67□□□□□ -0.54
PTPN20-216ENST00000506080 ZNF687Q8N1G0 1237 aa11.67□□□□□ -0.54
PTPN20-216ENST00000506080 TDRD7Q8NHU6 1098 aaKnown RBP11.67□□□□□ -0.54
PTPN20-216ENST00000506080 ZSWIM8A7E2V4 1837 aa11.66□□□□□ -0.54
PTPN20-216ENST00000506080 ZNF316A6NFI3 1004 aaPredicted RBP11.66□□□□□ -0.54
PTPN20-216ENST00000506080 BTBD19C9JJ37 291 aa11.66□□□□□ -0.54
PTPN20-216ENST00000506080 TLR2O60603 784 aa11.66□□□□□ -0.54
PTPN20-216ENST00000506080 HIBADHP31937 336 aaKnown RBP11.66□□□□□ -0.54
PTPN20-216ENST00000506080 CACNB3P54284 484 aa11.66□□□□□ -0.54
PTPN20-216ENST00000506080 KIF22Q14807 665 aa11.66□□□□□ -0.54
PTPN20-216ENST00000506080 GRIK5Q16478 980 aa11.66□□□□□ -0.54
PTPN20-216ENST00000506080 WWC1Q8IX03 1113 aa11.66□□□□□ -0.54
PTPN20-216ENST00000506080 IQSEC3Q9UPP2 1182 aaPredicted RBP11.66□□□□□ -0.54
PTPN20-216ENST00000506080 PCDHGA4Q9Y5G9 962 aa11.66□□□□□ -0.54
PTPN20-216ENST00000506080 SPDYE5A6NIY4 337 aa11.65□□□□□ -0.54
PTPN20-216ENST00000506080 WDHD1O75717 1129 aaPredicted RBP11.65□□□□□ -0.54
PTPN20-216ENST00000506080 LACTBP83111 547 aaPredicted RBP11.65□□□□□ -0.54
PTPN20-216ENST00000506080 CHAF1AQ13111 956 aaPredicted RBP11.65□□□□□ -0.54
PTPN20-216ENST00000506080 UBE4AQ14139 1066 aa11.65□□□□□ -0.54
PTPN20-216ENST00000506080 BEND3Q5T5X7 828 aa11.65□□□□□ -0.54
PTPN20-216ENST00000506080 FAM84BQ96KN1 310 aaPredicted RBP11.65□□□□□ -0.54
PTPN20-216ENST00000506080 PUS3Q9BZE2 481 aaKnown RBP11.65□□□□□ -0.54
PTPN20-216ENST00000506080 SNCAIPQ9Y6H5 919 aa11.65□□□□□ -0.54
PTPN20-216ENST00000506080 VAMP4O75379 141 aa11.64□□□□□ -0.55
PTPN20-216ENST00000506080 CETPP11597 493 aa11.64□□□□□ -0.55
PTPN20-216ENST00000506080 MTFR1Q15390 333 aa11.64□□□□□ -0.55
PTPN20-216ENST00000506080 CCDC27Q2M243 656 aa11.64□□□□□ -0.55
PTPN20-216ENST00000506080 DPF3Q92784 378 aa11.64□□□□□ -0.55
PTPN20-216ENST00000506080 ZKSCAN4Q969J2 545 aaPredicted RBP11.64□□□□□ -0.55
PTPN20-216ENST00000506080 WRNIP1Q96S55 665 aa11.64□□□□□ -0.55
PTPN20-216ENST00000506080 ARAP2Q8WZ64 1704 aa11.63□□□□□ -0.55
PTPN20-216ENST00000506080 FANCIQ9NVI1 1328 aa11.63□□□□□ -0.55
PTPN20-216ENST00000506080 IRF6O14896 467 aa11.63□□□□□ -0.55
PTPN20-216ENST00000506080 ERO1BQ86YB8 467 aa11.63□□□□□ -0.55
PTPN20-216ENST00000506080 GRM8O00222 908 aa11.62□□□□□ -0.55
PTPN20-216ENST00000506080 FRAT2O75474 233 aaPredicted RBP11.62□□□□□ -0.55
PTPN20-216ENST00000506080 CTGFP29279 349 aa11.62□□□□□ -0.55
PTPN20-216ENST00000506080 SNAPC2Q13487 334 aa11.62□□□□□ -0.55
PTPN20-216ENST00000506080 CCDC184Q52MB2 194 aa11.62□□□□□ -0.55
PTPN20-216ENST00000506080 VPS37DQ86XT2 251 aa11.62□□□□□ -0.55
PTPN20-216ENST00000506080 SHISA4Q96DD7 197 aa11.62□□□□□ -0.55
PTPN20-216ENST00000506080 C9orf78Q9NZ63 289 aaPredicted RBP11.62□□□□□ -0.55
PTPN20-216ENST00000506080 RBM27Q9P2N5 1060 aaKnown RBP11.62□□□□□ -0.55
PTPN20-216ENST00000506080 CPA4Q9UI42 421 aa11.62□□□□□ -0.55
PTPN20-216ENST00000506080 IL16Q14005 1332 aa11.61□□□□□ -0.55
PTPN20-216ENST00000506080 GNRH1P01148 92 aa11.61□□□□□ -0.55
PTPN20-216ENST00000506080 PSMC4P43686 418 aa11.61□□□□□ -0.55
PTPN20-216ENST00000506080 PRMT2P55345 433 aa11.61□□□□□ -0.55
PTPN20-216ENST00000506080 EXOSC9Q06265 439 aaKnown RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms