RNA–Protein interactions for RNA: ENST00000505589.1

NEDD9-210, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-210ENST00000505589 IFIT1P09914 478 aaKnown RBP12.45□□□□□ -0.42
NEDD9-210ENST00000505589 METTL24Q5JXM2 366 aa12.45□□□□□ -0.42
NEDD9-210ENST00000505589 SLC17A8Q8NDX2 589 aa12.45□□□□□ -0.42
NEDD9-210ENST00000505589 MYPNQ86TC9 1320 aa12.44□□□□□ -0.42
NEDD9-210ENST00000505589 KIF16BQ96L93 1317 aa12.44□□□□□ -0.42
NEDD9-210ENST00000505589 F6X3S4 739 aa12.44□□□□□ -0.42
NEDD9-210ENST00000505589 OSBPP22059 807 aa12.44□□□□□ -0.42
NEDD9-210ENST00000505589 CAP1Q01518 475 aa12.44□□□□□ -0.42
NEDD9-210ENST00000505589 CHAF1AQ13111 956 aaPredicted RBP12.44□□□□□ -0.42
NEDD9-210ENST00000505589 APOBEC3HQ6NTF7 200 aaKnown RBP12.44□□□□□ -0.42
NEDD9-210ENST00000505589 RBM27Q9P2N5 1060 aaKnown RBP12.44□□□□□ -0.42
NEDD9-210ENST00000505589 CPA4Q9UI42 421 aa12.44□□□□□ -0.42
NEDD9-210ENST00000505589 KCNH4Q9UQ05 1017 aa12.44□□□□□ -0.42
NEDD9-210ENST00000505589 RPAP1Q9BWH6 1393 aaPredicted RBP12.43□□□□□ -0.42
NEDD9-210ENST00000505589 AOX1Q06278 1338 aa12.43□□□□□ -0.42
NEDD9-210ENST00000505589 EVI5O60447 810 aa12.43□□□□□ -0.42
NEDD9-210ENST00000505589 SGPL1O95470 568 aa12.43□□□□□ -0.42
NEDD9-210ENST00000505589 CCL5P13501 91 aa12.43□□□□□ -0.42
NEDD9-210ENST00000505589 MTFR1Q15390 333 aa12.43□□□□□ -0.42
NEDD9-210ENST00000505589 SLC4A10Q6U841 1118 aa12.43□□□□□ -0.42
NEDD9-210ENST00000505589 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.43□□□□□ -0.42
NEDD9-210ENST00000505589 PXYLP1Q8TE99 480 aa12.43□□□□□ -0.42
NEDD9-210ENST00000505589 ARHGAP39Q9C0H5 1083 aa12.43□□□□□ -0.42
NEDD9-210ENST00000505589 GNL3LQ9NVN8 582 aaKnown RBP12.43□□□□□ -0.42
NEDD9-210ENST00000505589 ZNF112Q9UJU3 913 aa12.43□□□□□ -0.42
NEDD9-210ENST00000505589 FANCIQ9NVI1 1328 aa12.42□□□□□ -0.42
NEDD9-210ENST00000505589 DLL1O00548 723 aa12.42□□□□□ -0.42
NEDD9-210ENST00000505589 TFRCP02786 760 aaKnown RBP12.42□□□□□ -0.42
NEDD9-210ENST00000505589 EXOSC9Q06265 439 aaKnown RBP12.42□□□□□ -0.42
NEDD9-210ENST00000505589 EPHA10Q5JZY3 1008 aa12.42□□□□□ -0.42
NEDD9-210ENST00000505589 MIGA2Q7L4E1 593 aa12.42□□□□□ -0.42
NEDD9-210ENST00000505589 U2AF1L4Q8WU68 220 aaKnown RBP12.42□□□□□ -0.42
NEDD9-210ENST00000505589 SLC45A1Q9Y2W3 748 aa12.42□□□□□ -0.42
NEDD9-210ENST00000505589 BCAMP50895 628 aa12.41□□□□□ -0.42
NEDD9-210ENST00000505589 CACNB3P54284 484 aa12.41□□□□□ -0.42
NEDD9-210ENST00000505589 PUM3Q15397 648 aaKnown RBP12.41□□□□□ -0.42
NEDD9-210ENST00000505589 NOL9Q5SY16 702 aaKnown RBP12.41□□□□□ -0.42
NEDD9-210ENST00000505589 GPR153Q6NV75 609 aa12.41□□□□□ -0.42
NEDD9-210ENST00000505589 CDAN1Q8IWY9 1227 aa12.41□□□□□ -0.42
NEDD9-210ENST00000505589 SLF2Q8IX21 1173 aa12.41□□□□□ -0.42
NEDD9-210ENST00000505589 ZGPATQ8N5A5 531 aaKnown RBP12.41□□□□□ -0.42
NEDD9-210ENST00000505589 COA7Q96BR5 231 aa12.41□□□□□ -0.42
NEDD9-210ENST00000505589 PUS3Q9BZE2 481 aaKnown RBP12.41□□□□□ -0.42
NEDD9-210ENST00000505589 PICK1Q9NRD5 415 aa12.41□□□□□ -0.42
NEDD9-210ENST00000505589 UTYO14607 1347 aa12.4□□□□□ -0.42
NEDD9-210ENST00000505589 FARP2O94887 1054 aaPredicted RBP12.4□□□□□ -0.42
NEDD9-210ENST00000505589 SLC5A1P13866 664 aa12.4□□□□□ -0.42
NEDD9-210ENST00000505589 INPP5BP32019 993 aa12.4□□□□□ -0.42
NEDD9-210ENST00000505589 IRF5Q13568 498 aa12.4□□□□□ -0.42
NEDD9-210ENST00000505589 RABL6Q3YEC7 729 aaPredicted RBP12.4□□□□□ -0.42
NEDD9-210ENST00000505589 UBE2Q1Q7Z7E8 422 aa12.4□□□□□ -0.42
NEDD9-210ENST00000505589 LPIN2Q92539 896 aa12.4□□□□□ -0.42
NEDD9-210ENST00000505589 IQSEC3Q9UPP2 1182 aaPredicted RBP12.4□□□□□ -0.42
NEDD9-210ENST00000505589 HDAC5Q9UQL6 1122 aa12.4□□□□□ -0.42
NEDD9-210ENST00000505589 ZBTB7BO15156 539 aaPredicted RBP12.39□□□□□ -0.43
NEDD9-210ENST00000505589 ADCY3O60266 1144 aa12.39□□□□□ -0.43
NEDD9-210ENST00000505589 BCRP11274 1271 aa12.39□□□□□ -0.43
NEDD9-210ENST00000505589 NECAB2Q7Z6G3 386 aa12.39□□□□□ -0.43
NEDD9-210ENST00000505589 SMCR8Q8TEV9 937 aaPredicted RBP12.39□□□□□ -0.43
NEDD9-210ENST00000505589 SHISA4Q96DD7 197 aa12.39□□□□□ -0.43
NEDD9-210ENST00000505589 SUCLG2Q96I99 432 aa12.39□□□□□ -0.43
NEDD9-210ENST00000505589 FBXO3Q9UK99 471 aa12.39□□□□□ -0.43
NEDD9-210ENST00000505589 ZHX2Q9Y6X8 837 aa12.39□□□□□ -0.43
NEDD9-210ENST00000505589 LDHBP07195 334 aaKnown RBP12.38□□□□□ -0.43
NEDD9-210ENST00000505589 NBPF7P0C2Y1 421 aaPredicted RBP12.38□□□□□ -0.43
NEDD9-210ENST00000505589 PRKCZQ05513 592 aa12.38□□□□□ -0.43
NEDD9-210ENST00000505589 PABPC4Q13310 644 aaKnown RBP eCLIP12.38□□□□□ -0.43
NEDD9-210ENST00000505589 GRIK5Q16478 980 aa12.38□□□□□ -0.43
NEDD9-210ENST00000505589 ANKLE1Q8NAG6 615 aa12.38□□□□□ -0.43
NEDD9-210ENST00000505589 TBC1D2Q9BYX2 928 aa12.38□□□□□ -0.43
NEDD9-210ENST00000505589 PRO3102Q9H379 93 aa12.38□□□□□ -0.43
NEDD9-210ENST00000505589 BICC1Q9H694 974 aaKnown RBP12.38□□□□□ -0.43
NEDD9-210ENST00000505589 PNMA3Q9UL41 463 aa12.38□□□□□ -0.43
NEDD9-210ENST00000505589 LRRFIP2Q9Y608 721 aaKnown RBP12.38□□□□□ -0.43
NEDD9-210ENST00000505589 A0A0G2JLL6 359 aaPredicted RBP12.37□□□□□ -0.43
NEDD9-210ENST00000505589 TNPO2O14787 897 aaKnown RBP12.37□□□□□ -0.43
NEDD9-210ENST00000505589 SEMA3EO15041 775 aa12.37□□□□□ -0.43
NEDD9-210ENST00000505589 ENTPD3O75355 529 aa12.37□□□□□ -0.43
NEDD9-210ENST00000505589 ECM2O94769 699 aaPredicted RBP12.37□□□□□ -0.43
NEDD9-210ENST00000505589 BMP8BP34820 402 aa12.37□□□□□ -0.43
NEDD9-210ENST00000505589 FLT3LGP49771 235 aa12.37□□□□□ -0.43
NEDD9-210ENST00000505589 TCP10Q12799 353 aa12.37□□□□□ -0.43
NEDD9-210ENST00000505589 LRRC24Q50LG9 513 aa12.37□□□□□ -0.43
NEDD9-210ENST00000505589 CDC42EP5Q6NZY7 148 aa12.37□□□□□ -0.43
NEDD9-210ENST00000505589 PRRT2Q7Z6L0 340 aaPredicted RBP12.37□□□□□ -0.43
NEDD9-210ENST00000505589 VGLL2Q8N8G2 317 aa12.37□□□□□ -0.43
NEDD9-210ENST00000505589 USP40Q9NVE5 1235 aa12.37□□□□□ -0.43
NEDD9-210ENST00000505589 RNF216Q9NWF9 866 aaPredicted RBP12.37□□□□□ -0.43
NEDD9-210ENST00000505589 DENND2AQ9ULE3 1009 aa12.37□□□□□ -0.43
NEDD9-210ENST00000505589 SZT2Q5T011 3432 aa12.37□□□□□ -0.43
NEDD9-210ENST00000505589 PTPRCP08575 1304 aa12.37□□□□□ -0.43
NEDD9-210ENST00000505589 ADGRA2Q96PE1 1338 aa12.37□□□□□ -0.43
NEDD9-210ENST00000505589 OTOFQ9HC10 1997 aa12.36□□□□□ -0.43
NEDD9-210ENST00000505589 ZBTB22O15209 634 aa12.36□□□□□ -0.43
NEDD9-210ENST00000505589 CTNND1O60716 968 aaKnown RBP12.36□□□□□ -0.43
NEDD9-210ENST00000505589 FGFR2P21802 821 aa12.36□□□□□ -0.43
NEDD9-210ENST00000505589 CTGFP29279 349 aa12.36□□□□□ -0.43
NEDD9-210ENST00000505589 MNX1P50219 401 aaPredicted RBP12.36□□□□□ -0.43
NEDD9-210ENST00000505589 GPAT2Q6NUI2 795 aa12.36□□□□□ -0.43
NEDD9-210ENST00000505589 ZSCAN29Q8IWY8 852 aaPredicted RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms