RNA–Protein interactions for RNA: ENST00000505337.5

DHFR-203, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene DHFR, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-203ENST00000505337 LCORLQ8N3X6 602 aa29.06■■■□□ 2.24
DHFR-203ENST00000505337 SMARCC2Q8TAQ2 1214 aa29.06■■■□□ 2.24
DHFR-203ENST00000505337 GPT2Q8TD30 523 aa29.06■■■□□ 2.24
DHFR-203ENST00000505337 ZNF274Q96GC6 653 aaPredicted RBP29.06■■■□□ 2.24
DHFR-203ENST00000505337 MASTLQ96GX5 879 aa29.06■■■□□ 2.24
DHFR-203ENST00000505337 ATP6V1DQ9Y5K8 247 aa29.06■■■□□ 2.24
DHFR-203ENST00000505337 ECM29Q5VYK3 1845 aa29.06■■■□□ 2.24
DHFR-203ENST00000505337 APPP05067 770 aa29.06■■■□□ 2.24
DHFR-203ENST00000505337 LARP1BQ659C4 914 aaKnown RBP29.06■■■□□ 2.24
DHFR-203ENST00000505337 RALYLQ86SE5 291 aaKnown RBP29.06■■■□□ 2.24
DHFR-203ENST00000505337 ZNF784Q8NCA9 323 aaPredicted RBP29.06■■■□□ 2.24
DHFR-203ENST00000505337 GSG1L2A8MUP6 293 aa29.05■■■□□ 2.24
DHFR-203ENST00000505337 PRC1O43663 620 aa29.05■■■□□ 2.24
DHFR-203ENST00000505337 JAK2O60674 1132 aa29.05■■■□□ 2.24
DHFR-203ENST00000505337 IFNL3Q8IZI9 196 aa29.05■■■□□ 2.24
DHFR-203ENST00000505337 VPS37CA5D8V6 355 aaPredicted RBP29.04■■■□□ 2.24
DHFR-203ENST00000505337 ADGRA1Q86SQ6 560 aa29.04■■■□□ 2.24
DHFR-203ENST00000505337 DUOX1Q9NRD9 1551 aa29.04■■■□□ 2.24
DHFR-203ENST00000505337 NSUN7Q8NE18 718 aaKnown RBP29.03■■■□□ 2.24
DHFR-203ENST00000505337 ABCF2Q9UG63 623 aa29.03■■■□□ 2.24
DHFR-203ENST00000505337 CYP7A1P22680 504 aa29.03■■■□□ 2.24
DHFR-203ENST00000505337 PDIA3P30101 505 aaKnown RBP29.03■■■□□ 2.24
DHFR-203ENST00000505337 HIBADHP31937 336 aaKnown RBP29.03■■■□□ 2.24
DHFR-203ENST00000505337 CDC37L1Q7L3B6 337 aa29.03■■■□□ 2.24
DHFR-203ENST00000505337 CNKSR1Q969H4 720 aa29.03■■■□□ 2.24
DHFR-203ENST00000505337 NAPBQ9H115 298 aa29.03■■■□□ 2.24
DHFR-203ENST00000505337 SALL1Q9NSC2 1324 aa29.03■■■□□ 2.24
DHFR-203ENST00000505337 ISY1Q9ULR0 285 aaKnown RBP29.03■■■□□ 2.24
DHFR-203ENST00000505337 MBD3O95983 291 aa29.02■■■□□ 2.24
DHFR-203ENST00000505337 NPR1P16066 1061 aa29.02■■■□□ 2.24
DHFR-203ENST00000505337 RAI14Q9P0K7 980 aa29.02■■■□□ 2.24
DHFR-203ENST00000505337 CTDNEP1O95476 244 aa29.01■■■□□ 2.23
DHFR-203ENST00000505337 FOXD4L6Q3SYB3 417 aaPredicted RBP29.01■■■□□ 2.23
DHFR-203ENST00000505337 FOXD4L3Q6VB84 417 aaPredicted RBP29.01■■■□□ 2.23
DHFR-203ENST00000505337 GPHNQ9NQX3 736 aaPredicted RBP29.01■■■□□ 2.23
DHFR-203ENST00000505337 SLX4Q8IY92 1834 aa29.01■■■□□ 2.23
DHFR-203ENST00000505337 NEDD4P46934 1319 aa29■■■□□ 2.23
DHFR-203ENST00000505337 GOLGA6L3A6NEY3 463 aa29■■■□□ 2.23
DHFR-203ENST00000505337 TRDNQ13061 729 aa29■■■□□ 2.23
DHFR-203ENST00000505337 L1TD1Q5T7N2 865 aaKnown RBP29■■■□□ 2.23
DHFR-203ENST00000505337 MIGA1Q8NAN2 632 aa29■■■□□ 2.23
DHFR-203ENST00000505337 ZNF384Q8TF68 577 aa29■■■□□ 2.23
DHFR-203ENST00000505337 RPGRQ92834 1020 aaKnown RBP29■■■□□ 2.23
DHFR-203ENST00000505337 LEMD3Q9Y2U8 911 aa29■■■□□ 2.23
DHFR-203ENST00000505337 SLC4A4Q9Y6R1 1079 aa29■■■□□ 2.23
DHFR-203ENST00000505337 XDHP47989 1333 aa29■■■□□ 2.23
DHFR-203ENST00000505337 PRKAB2O43741 272 aa29■■■□□ 2.23
DHFR-203ENST00000505337 SLC51AQ86UW1 340 aa29■■■□□ 2.23
DHFR-203ENST00000505337 TXNRD3Q86VQ6 643 aa29■■■□□ 2.23
DHFR-203ENST00000505337 CNPY2Q9Y2B0 182 aa29■■■□□ 2.23
DHFR-203ENST00000505337 C21orf2O43822 256 aa28.99■■■□□ 2.23
DHFR-203ENST00000505337 NKX2-3Q8TAU0 364 aa28.99■■■□□ 2.23
DHFR-203ENST00000505337 RIOK1Q9BRS2 568 aaKnown RBP28.99■■■□□ 2.23
DHFR-203ENST00000505337 GDPD2Q9HCC8 539 aa28.99■■■□□ 2.23
DHFR-203ENST00000505337 ZNF219Q9P2Y4 722 aaPredicted RBP28.99■■■□□ 2.23
DHFR-203ENST00000505337 HMGN5P82970 282 aaKnown RBP28.98■■■□□ 2.23
DHFR-203ENST00000505337 CAVIN1Q6NZI2 390 aaKnown RBP28.98■■■□□ 2.23
DHFR-203ENST00000505337 CHMP4CQ96CF2 233 aa28.98■■■□□ 2.23
DHFR-203ENST00000505337 NACAP1Q9BZK3 213 aa28.98■■■□□ 2.23
DHFR-203ENST00000505337 MYH2Q9UKX2 1941 aa28.98■■■□□ 2.23
DHFR-203ENST00000505337 PTPDC1A2A3K4 754 aa28.97■■■□□ 2.23
DHFR-203ENST00000505337 CYB5R4Q7L1T6 521 aa28.97■■■□□ 2.23
DHFR-203ENST00000505337 USP48Q86UV5 1035 aa28.97■■■□□ 2.23
DHFR-203ENST00000505337 BRPF3Q9ULD4 1205 aa28.97■■■□□ 2.23
DHFR-203ENST00000505337 NSFL1CQ9UNZ2 370 aaKnown RBP28.97■■■□□ 2.23
DHFR-203ENST00000505337 MAGEB6P1A0A0J9YX57 407 aa28.97■■■□□ 2.23
DHFR-203ENST00000505337 CCT2P78371 535 aaKnown RBP28.97■■■□□ 2.23
DHFR-203ENST00000505337 RASSF7Q02833 373 aa28.97■■■□□ 2.23
DHFR-203ENST00000505337 C15orf52Q6ZUT6 534 aaKnown RBP28.97■■■□□ 2.23
DHFR-203ENST00000505337 NCOA5Q9HCD5 579 aaKnown RBP28.97■■■□□ 2.23
DHFR-203ENST00000505337 CDK5RAP2Q96SN8 1893 aa28.97■■■□□ 2.23
DHFR-203ENST00000505337 NAA16Q6N069 864 aaPredicted RBP28.96■■■□□ 2.23
DHFR-203ENST00000505337 C7orf43Q8WVR3 580 aa28.96■■■□□ 2.23
DHFR-203ENST00000505337 ANKIB1Q9P2G1 1089 aa28.96■■■□□ 2.23
DHFR-203ENST00000505337 HPS5Q9UPZ3 1129 aa28.96■■■□□ 2.23
DHFR-203ENST00000505337 B4E1Z4 1266 aa28.95■■■□□ 2.23
DHFR-203ENST00000505337 HOXA10P31260 410 aaPredicted RBP28.95■■■□□ 2.23
DHFR-203ENST00000505337 TDO2P48775 406 aa28.95■■■□□ 2.23
DHFR-203ENST00000505337 TMED8Q6PL24 325 aaPredicted RBP28.95■■■□□ 2.23
DHFR-203ENST00000505337 NSUN4Q96CB9 384 aaKnown RBP28.95■■■□□ 2.23
DHFR-203ENST00000505337 ANGEL1Q9UNK9 670 aaKnown RBP28.95■■■□□ 2.23
DHFR-203ENST00000505337 TACC3Q9Y6A5 838 aa28.95■■■□□ 2.23
DHFR-203ENST00000505337 KLF18A0A0U1RQI7 1052 aa28.94■■■□□ 2.22
DHFR-203ENST00000505337 SH2B2O14492 632 aaPredicted RBP28.94■■■□□ 2.22
DHFR-203ENST00000505337 NCLP19338 710 aaKnown RBP28.94■■■□□ 2.22
DHFR-203ENST00000505337 PRELPP51888 382 aa28.94■■■□□ 2.22
DHFR-203ENST00000505337 ZNF445P59923 1031 aa28.94■■■□□ 2.22
DHFR-203ENST00000505337 DNM1Q05193 864 aaKnown RBP28.94■■■□□ 2.22
DHFR-203ENST00000505337 STAG1Q8WVM7 1258 aa28.94■■■□□ 2.22
DHFR-203ENST00000505337 DDX11Q96FC9 970 aa28.94■■■□□ 2.22
DHFR-203ENST00000505337 RBM17Q96I25 401 aaKnown RBP28.94■■■□□ 2.22
DHFR-203ENST00000505337 NFKBIEO00221 500 aa28.94■■■□□ 2.22
DHFR-203ENST00000505337 CTDSPL2Q05D32 466 aa28.94■■■□□ 2.22
DHFR-203ENST00000505337 ZSCAN23Q3MJ62 389 aa28.94■■■□□ 2.22
DHFR-203ENST00000505337 AKNAD1Q5T1N1 836 aa28.94■■■□□ 2.22
DHFR-203ENST00000505337 C9orf131Q5VYM1 1079 aa28.94■■■□□ 2.22
DHFR-203ENST00000505337 CNNM2Q9H8M5 875 aa28.94■■■□□ 2.22
DHFR-203ENST00000505337 GOLGA8BA8MQT2 603 aa28.93■■■□□ 2.22
DHFR-203ENST00000505337 GADD45BO75293 160 aaPredicted RBP28.93■■■□□ 2.22
DHFR-203ENST00000505337 ALDH1B1P30837 517 aa28.93■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms