RNA–Protein interactions for RNA: ENST00000505207.5

UBE2D3-219, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5 BASIC

Gene UBE2D3, Length 527 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-219ENST00000505207 GRIK5Q16478 980 aa13.86□□□□□ -0.19
UBE2D3-219ENST00000505207 APOBEC3HQ6NTF7 200 aaKnown RBP13.86□□□□□ -0.19
UBE2D3-219ENST00000505207 KLHDC4Q8TBB5 520 aa13.86□□□□□ -0.19
UBE2D3-219ENST00000505207 ARMC5Q96C12 935 aa13.86□□□□□ -0.19
UBE2D3-219ENST00000505207 ZNF341Q9BYN7 854 aa13.86□□□□□ -0.19
UBE2D3-219ENST00000505207 SMC4Q9NTJ3 1288 aa13.86□□□□□ -0.19
UBE2D3-219ENST00000505207 CIAO1O76071 339 aa13.85□□□□□ -0.19
UBE2D3-219ENST00000505207 GNRH1P01148 92 aa13.85□□□□□ -0.19
UBE2D3-219ENST00000505207 CACNB3P54284 484 aa13.85□□□□□ -0.19
UBE2D3-219ENST00000505207 FAM151AQ8WW52 585 aa13.85□□□□□ -0.19
UBE2D3-219ENST00000505207 SEMA3EO15041 775 aa13.84□□□□□ -0.19
UBE2D3-219ENST00000505207 TLR2O60603 784 aa13.84□□□□□ -0.19
UBE2D3-219ENST00000505207 LDHBP07195 334 aaKnown RBP13.84□□□□□ -0.19
UBE2D3-219ENST00000505207 PPATQ06203 517 aa13.84□□□□□ -0.19
UBE2D3-219ENST00000505207 PPIL2Q13356 520 aa13.84□□□□□ -0.19
UBE2D3-219ENST00000505207 ATP2B3Q16720 1220 aa13.84□□□□□ -0.19
UBE2D3-219ENST00000505207 SLC9C1Q4G0N8 1177 aa13.84□□□□□ -0.19
UBE2D3-219ENST00000505207 CDAN1Q8IWY9 1227 aa13.84□□□□□ -0.19
UBE2D3-219ENST00000505207 ZGPATQ8N5A5 531 aaKnown RBP13.84□□□□□ -0.19
UBE2D3-219ENST00000505207 API5Q9BZZ5 524 aaKnown RBP13.84□□□□□ -0.19
UBE2D3-219ENST00000505207 DENND2AQ9ULE3 1009 aa13.84□□□□□ -0.19
UBE2D3-219ENST00000505207 RPAP1Q9BWH6 1393 aaPredicted RBP13.83□□□□□ -0.19
UBE2D3-219ENST00000505207 IL15P40933 162 aaPredicted RBP13.83□□□□□ -0.2
UBE2D3-219ENST00000505207 RFX5P48382 616 aaPredicted RBP13.83□□□□□ -0.2
UBE2D3-219ENST00000505207 PRMT2P55345 433 aa13.83□□□□□ -0.2
UBE2D3-219ENST00000505207 SLF2Q8IX21 1173 aa13.83□□□□□ -0.2
UBE2D3-219ENST00000505207 FAM43AQ8N2R8 423 aa13.83□□□□□ -0.2
UBE2D3-219ENST00000505207 ZKSCAN4Q969J2 545 aaPredicted RBP13.83□□□□□ -0.2
UBE2D3-219ENST00000505207 SNCAIPQ9Y6H5 919 aa13.83□□□□□ -0.2
UBE2D3-219ENST00000505207 POTEFA5A3E0 1075 aa13.82□□□□□ -0.2
UBE2D3-219ENST00000505207 IRF6O14896 467 aa13.82□□□□□ -0.2
UBE2D3-219ENST00000505207 HOXD10P28358 340 aa13.82□□□□□ -0.2
UBE2D3-219ENST00000505207 SLC4A8Q2Y0W8 1093 aa13.82□□□□□ -0.2
UBE2D3-219ENST00000505207 MIGA2Q7L4E1 593 aa13.82□□□□□ -0.2
UBE2D3-219ENST00000505207 ATG9AQ7Z3C6 839 aa13.82□□□□□ -0.2
UBE2D3-219ENST00000505207 SIL1Q9H173 461 aa13.82□□□□□ -0.2
UBE2D3-219ENST00000505207 USP40Q9NVE5 1235 aa13.82□□□□□ -0.2
UBE2D3-219ENST00000505207 ARAP2Q8WZ64 1704 aa13.81□□□□□ -0.2
UBE2D3-219ENST00000505207 LAMB1P07942 1786 aa13.81□□□□□ -0.2
UBE2D3-219ENST00000505207 BTBD19C9JJ37 291 aa13.81□□□□□ -0.2
UBE2D3-219ENST00000505207 CDC42EP5Q6NZY7 148 aa13.81□□□□□ -0.2
UBE2D3-219ENST00000505207 NOB1Q9ULX3 412 aaKnown RBP13.81□□□□□ -0.2
UBE2D3-219ENST00000505207 DAGLAQ9Y4D2 1042 aa13.81□□□□□ -0.2
UBE2D3-219ENST00000505207 LACTBP83111 547 aaPredicted RBP13.8□□□□□ -0.2
UBE2D3-219ENST00000505207 TCP10Q12799 353 aa13.8□□□□□ -0.2
UBE2D3-219ENST00000505207 SPTY2D1Q68D10 685 aaPredicted RBP13.8□□□□□ -0.2
UBE2D3-219ENST00000505207 ANKRD23Q86SG2 305 aa13.8□□□□□ -0.2
UBE2D3-219ENST00000505207 ZNF333Q96JL9 665 aa13.8□□□□□ -0.2
UBE2D3-219ENST00000505207 ZNF112Q9UJU3 913 aa13.8□□□□□ -0.2
UBE2D3-219ENST00000505207 AKAP2Q9Y2D5 859 aa13.8□□□□□ -0.2
UBE2D3-219ENST00000505207 SALL1Q9NSC2 1324 aa13.8□□□□□ -0.2
UBE2D3-219ENST00000505207 KIAA0100Q14667 2235 aaKnown RBP13.79□□□□□ -0.2
UBE2D3-219ENST00000505207 GNAI3P08754 354 aa13.79□□□□□ -0.2
UBE2D3-219ENST00000505207 EN2P19622 333 aaPredicted RBP13.79□□□□□ -0.2
UBE2D3-219ENST00000505207 NOL9Q5SY16 702 aaKnown RBP13.79□□□□□ -0.2
UBE2D3-219ENST00000505207 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.79□□□□□ -0.2
UBE2D3-219ENST00000505207 COPRSQ9NQ92 184 aa13.79□□□□□ -0.2
UBE2D3-219ENST00000505207 PTCH2Q9Y6C5 1203 aa13.79□□□□□ -0.2
UBE2D3-219ENST00000505207 PDHXO00330 501 aa13.78□□□□□ -0.2
UBE2D3-219ENST00000505207 CXCL11O14625 94 aa13.78□□□□□ -0.2
UBE2D3-219ENST00000505207 ENTPD3O75355 529 aa13.78□□□□□ -0.2
UBE2D3-219ENST00000505207 PRDX5P30044 214 aa13.78□□□□□ -0.2
UBE2D3-219ENST00000505207 INPP5BP32019 993 aa13.78□□□□□ -0.2
UBE2D3-219ENST00000505207 DIXDC1Q155Q3 683 aa13.78□□□□□ -0.2
UBE2D3-219ENST00000505207 DZIP1Q86YF9 867 aaKnown RBP13.78□□□□□ -0.2
UBE2D3-219ENST00000505207 TRMT2AQ8IZ69 625 aaKnown RBP13.78□□□□□ -0.2
UBE2D3-219ENST00000505207 ARHGAP45Q92619 1136 aa13.78□□□□□ -0.2
UBE2D3-219ENST00000505207 CDCA7LQ96GN5 454 aa13.78□□□□□ -0.2
UBE2D3-219ENST00000505207 PICK1Q9NRD5 415 aa13.78□□□□□ -0.2
UBE2D3-219ENST00000505207 KCNH4Q9UQ05 1017 aa13.78□□□□□ -0.2
UBE2D3-219ENST00000505207 LRRFIP2Q9Y608 721 aaKnown RBP13.78□□□□□ -0.2
UBE2D3-219ENST00000505207 OTOFQ9HC10 1997 aa13.78□□□□□ -0.2
UBE2D3-219ENST00000505207 IPO8O15397 1037 aaKnown RBP13.77□□□□□ -0.21
UBE2D3-219ENST00000505207 PHKA1P46020 1223 aa13.77□□□□□ -0.21
UBE2D3-219ENST00000505207 MVPQ14764 893 aaKnown RBP13.77□□□□□ -0.21
UBE2D3-219ENST00000505207 CCDC102BQ68D86 513 aa13.77□□□□□ -0.21
UBE2D3-219ENST00000505207 C17orf99Q6UX52 265 aa13.77□□□□□ -0.21
UBE2D3-219ENST00000505207 FASTKD5Q7L8L6 764 aaKnown RBP13.77□□□□□ -0.21
UBE2D3-219ENST00000505207 ZSCAN29Q8IWY8 852 aaPredicted RBP13.77□□□□□ -0.21
UBE2D3-219ENST00000505207 PARK7Q99497 189 aaKnown RBP13.77□□□□□ -0.21
UBE2D3-219ENST00000505207 PDS5AQ29RF7 1337 aaKnown RBP13.76□□□□□ -0.21
UBE2D3-219ENST00000505207 FMNL1O95466 1100 aaPredicted RBP13.76□□□□□ -0.21
UBE2D3-219ENST00000505207 PSMC4P43686 418 aa13.76□□□□□ -0.21
UBE2D3-219ENST00000505207 NFIAQ12857 509 aa13.76□□□□□ -0.21
UBE2D3-219ENST00000505207 NKX2-3Q8TAU0 364 aa13.76□□□□□ -0.21
UBE2D3-219ENST00000505207 RAET1EQ8TD07 263 aa13.76□□□□□ -0.21
UBE2D3-219ENST00000505207 FAM163AQ96GL9 167 aaPredicted RBP13.76□□□□□ -0.21
UBE2D3-219ENST00000505207 IDI2Q9BXS1 227 aa13.76□□□□□ -0.21
UBE2D3-219ENST00000505207 FAM198AQ9UFP1 575 aa13.76□□□□□ -0.21
UBE2D3-219ENST00000505207 ABCF2Q9UG63 623 aa13.76□□□□□ -0.21
UBE2D3-219ENST00000505207 MAP4K4O95819 1239 aaPredicted RBP13.75□□□□□ -0.21
UBE2D3-219ENST00000505207 RGS3P49796 1198 aa13.75□□□□□ -0.21
UBE2D3-219ENST00000505207 GSTO1P78417 241 aa13.75□□□□□ -0.21
UBE2D3-219ENST00000505207 CAP1Q01518 475 aa13.75□□□□□ -0.21
UBE2D3-219ENST00000505207 GORABQ5T7V8 394 aa13.75□□□□□ -0.21
UBE2D3-219ENST00000505207 SCYL3Q8IZE3 742 aa13.75□□□□□ -0.21
UBE2D3-219ENST00000505207 TRIM47Q96LD4 638 aa13.75□□□□□ -0.21
UBE2D3-219ENST00000505207 SRRDQ9UH36 339 aa13.75□□□□□ -0.21
UBE2D3-219ENST00000505207 CPA4Q9UI42 421 aa13.75□□□□□ -0.21
UBE2D3-219ENST00000505207 PA2G4Q9UQ80 394 aaKnown RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms