RNA–Protein interactions for RNA: ENST00000505010.5

TPM3-218, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-218ENST00000505010 JAG2Q9Y219 1238 aa11.23□□□□□ -0.61
TPM3-218ENST00000505010 MAST3O60307 1309 aa11.23□□□□□ -0.61
TPM3-218ENST00000505010 CCDC171Q6TFL3 1326 aa11.23□□□□□ -0.61
TPM3-218ENST00000505010 ZNF646O15015 1829 aaPredicted RBP11.23□□□□□ -0.61
TPM3-218ENST00000505010 PSME4Q14997 1843 aa11.23□□□□□ -0.61
TPM3-218ENST00000505010 TRPA1O75762 1119 aa11.22□□□□□ -0.61
TPM3-218ENST00000505010 ADD2P35612 726 aa11.22□□□□□ -0.61
TPM3-218ENST00000505010 GMPSP49915 693 aaPredicted RBP11.22□□□□□ -0.61
TPM3-218ENST00000505010 CXCL9Q07325 125 aa11.22□□□□□ -0.61
TPM3-218ENST00000505010 AOC3Q16853 763 aa11.22□□□□□ -0.61
TPM3-218ENST00000505010 MCMDC2Q4G0Z9 681 aa11.22□□□□□ -0.61
TPM3-218ENST00000505010 SLC9C2Q5TAH2 1124 aa11.22□□□□□ -0.61
TPM3-218ENST00000505010 MAGEB6Q8N7X4 407 aa11.22□□□□□ -0.61
TPM3-218ENST00000505010 APPBP2Q92624 585 aa11.22□□□□□ -0.61
TPM3-218ENST00000505010 ZNF532Q9HCE3 1301 aa11.22□□□□□ -0.61
TPM3-218ENST00000505010 RAI14Q9P0K7 980 aa11.22□□□□□ -0.61
TPM3-218ENST00000505010 MYH2Q9UKX2 1941 aa11.22□□□□□ -0.61
TPM3-218ENST00000505010 ZNRF3Q9ULT6 936 aa11.22□□□□□ -0.61
TPM3-218ENST00000505010 G3V3G9 751 aa11.21□□□□□ -0.61
TPM3-218ENST00000505010 HIRAP54198 1017 aaPredicted RBP11.21□□□□□ -0.61
TPM3-218ENST00000505010 PTH1RQ03431 593 aa11.21□□□□□ -0.61
TPM3-218ENST00000505010 DCAF8Q5TAQ9 597 aa11.21□□□□□ -0.61
TPM3-218ENST00000505010 RGMBQ6NW40 437 aa11.21□□□□□ -0.61
TPM3-218ENST00000505010 TDRD7Q8NHU6 1098 aaKnown RBP11.21□□□□□ -0.61
TPM3-218ENST00000505010 CCDC102AQ96A19 550 aa11.21□□□□□ -0.61
TPM3-218ENST00000505010 ZC3H12CQ9C0D7 883 aaKnown RBP11.21□□□□□ -0.61
TPM3-218ENST00000505010 CD209Q9NNX6 404 aa11.21□□□□□ -0.61
TPM3-218ENST00000505010 SCN9AQ15858 1988 aa11.21□□□□□ -0.62
TPM3-218ENST00000505010 EPB41L2O43491 1005 aaKnown RBP11.2□□□□□ -0.62
TPM3-218ENST00000505010 IL1R1P14778 569 aa11.2□□□□□ -0.62
TPM3-218ENST00000505010 KIF23Q02241 960 aaPredicted RBP11.2□□□□□ -0.62
TPM3-218ENST00000505010 TNIP1Q15025 636 aa11.2□□□□□ -0.62
TPM3-218ENST00000505010 UBE3CQ15386 1083 aa11.2□□□□□ -0.62
TPM3-218ENST00000505010 ERICH6Q7L0X2 663 aa11.2□□□□□ -0.62
TPM3-218ENST00000505010 CTU1Q7Z7A3 348 aaKnown RBP11.2□□□□□ -0.62
TPM3-218ENST00000505010 USP48Q86UV5 1035 aa11.2□□□□□ -0.62
TPM3-218ENST00000505010 ZGPATQ8N5A5 531 aaKnown RBP11.2□□□□□ -0.62
TPM3-218ENST00000505010 SUPT20HQ8NEM7 779 aa11.2□□□□□ -0.62
TPM3-218ENST00000505010 WDR66Q8TBY9 1149 aa11.2□□□□□ -0.62
TPM3-218ENST00000505010 FBXW7Q969H0 707 aa11.2□□□□□ -0.62
TPM3-218ENST00000505010 RNF186Q9NXI6 227 aa11.2□□□□□ -0.62
TPM3-218ENST00000505010 NAV1Q8NEY1 1877 aa11.19□□□□□ -0.62
TPM3-218ENST00000505010 CDK5RAP2Q96SN8 1893 aa11.19□□□□□ -0.62
TPM3-218ENST00000505010 SALL1Q9NSC2 1324 aa11.19□□□□□ -0.62
TPM3-218ENST00000505010 TCRBV5S4A2TA0A5A2 114 aa11.19□□□□□ -0.62
TPM3-218ENST00000505010 FAM155AB1AL88 458 aaPredicted RBP11.19□□□□□ -0.62
TPM3-218ENST00000505010 H7C1D1 291 aa11.19□□□□□ -0.62
TPM3-218ENST00000505010 ZBTB22O15209 634 aa11.19□□□□□ -0.62
TPM3-218ENST00000505010 CYP7A1P22680 504 aa11.19□□□□□ -0.62
TPM3-218ENST00000505010 ZNF157P51786 506 aaPredicted RBP11.19□□□□□ -0.62
TPM3-218ENST00000505010 DOK7Q18PE1 504 aa11.19□□□□□ -0.62
TPM3-218ENST00000505010 SPTY2D1Q68D10 685 aaPredicted RBP11.19□□□□□ -0.62
TPM3-218ENST00000505010 DZIP1Q86YF9 867 aaKnown RBP11.19□□□□□ -0.62
TPM3-218ENST00000505010 C2orf69Q8N8R5 385 aa11.19□□□□□ -0.62
TPM3-218ENST00000505010 OSBP2Q969R2 916 aa11.19□□□□□ -0.62
TPM3-218ENST00000505010 DDRGK1Q96HY6 314 aa11.19□□□□□ -0.62
TPM3-218ENST00000505010 RTFDC1Q9BY42 306 aaPredicted RBP11.19□□□□□ -0.62
TPM3-218ENST00000505010 COA1Q9GZY4 146 aa11.19□□□□□ -0.62
TPM3-218ENST00000505010 PUS7LQ9H0K6 701 aaKnown RBP11.19□□□□□ -0.62
TPM3-218ENST00000505010 CNOT7Q9UIV1 285 aaKnown RBP11.19□□□□□ -0.62
TPM3-218ENST00000505010 PALD1Q9ULE6 856 aa11.19□□□□□ -0.62
TPM3-218ENST00000505010 RBM8AQ9Y5S9 174 aaKnown RBP11.19□□□□□ -0.62
TPM3-218ENST00000505010 LAMB1P07942 1786 aa11.18□□□□□ -0.62
TPM3-218ENST00000505010 GPAA1O43292 621 aa11.18□□□□□ -0.62
TPM3-218ENST00000505010 RAD17O75943 681 aa11.18□□□□□ -0.62
TPM3-218ENST00000505010 MBD4O95243 580 aa11.18□□□□□ -0.62
TPM3-218ENST00000505010 HSPA4P34932 840 aa11.18□□□□□ -0.62
TPM3-218ENST00000505010 NAA16Q6N069 864 aaPredicted RBP11.18□□□□□ -0.62
TPM3-218ENST00000505010 TRPM4Q8TD43 1214 aa11.18□□□□□ -0.62
TPM3-218ENST00000505010 GBA2Q9HCG7 927 aaPredicted RBP11.18□□□□□ -0.62
TPM3-218ENST00000505010 HPS5Q9UPZ3 1129 aa11.18□□□□□ -0.62
TPM3-218ENST00000505010 BAZ2AQ9UIF9 1905 aaKnown RBP11.17□□□□□ -0.62
TPM3-218ENST00000505010 ECE2O60344 883 aa11.17□□□□□ -0.62
TPM3-218ENST00000505010 LDHBP07195 334 aaKnown RBP11.17□□□□□ -0.62
TPM3-218ENST00000505010 PRDX5P30044 214 aa11.17□□□□□ -0.62
TPM3-218ENST00000505010 GTF2IP78347 998 aa11.17□□□□□ -0.62
TPM3-218ENST00000505010 MECOMQ03112 1051 aa11.17□□□□□ -0.62
TPM3-218ENST00000505010 PKN2Q16513 984 aaKnown RBP11.17□□□□□ -0.62
TPM3-218ENST00000505010 VPS53Q5VIR6 699 aa11.17□□□□□ -0.62
TPM3-218ENST00000505010 DLK2Q6UY11 383 aa11.17□□□□□ -0.62
TPM3-218ENST00000505010 KRT26Q7Z3Y9 468 aa11.17□□□□□ -0.62
TPM3-218ENST00000505010 MIGA1Q8NAN2 632 aa11.17□□□□□ -0.62
TPM3-218ENST00000505010 MAP4K1Q92918 833 aa11.17□□□□□ -0.62
TPM3-218ENST00000505010 CSRNP1Q96S65 589 aa11.17□□□□□ -0.62
TPM3-218ENST00000505010 KIF2CQ99661 725 aa11.17□□□□□ -0.62
TPM3-218ENST00000505010 ARMT1Q9H993 441 aa11.17□□□□□ -0.62
TPM3-218ENST00000505010 DBNDD1Q9H9R9 158 aa11.17□□□□□ -0.62
TPM3-218ENST00000505010 U3KPZ7 1027 aaPredicted RBP11.17□□□□□ -0.62
TPM3-218ENST00000505010 ECM29Q5VYK3 1845 aa11.16□□□□□ -0.62
TPM3-218ENST00000505010 FAM205AQ6ZU69 1335 aa11.16□□□□□ -0.62
TPM3-218ENST00000505010 MAGEB6P1A0A0J9YX57 407 aa11.16□□□□□ -0.62
TPM3-218ENST00000505010 ANAPC15P60006 121 aa11.16□□□□□ -0.62
TPM3-218ENST00000505010 KIAA2012Q0VF49 1180 aa11.16□□□□□ -0.62
TPM3-218ENST00000505010 RABEP1Q15276 862 aa11.16□□□□□ -0.62
TPM3-218ENST00000505010 MFSD14BQ5SR56 506 aa11.16□□□□□ -0.62
TPM3-218ENST00000505010 RNF20Q5VTR2 975 aa11.16□□□□□ -0.62
TPM3-218ENST00000505010 CREB3L3Q68CJ9 461 aa11.16□□□□□ -0.62
TPM3-218ENST00000505010 ADGRA1Q86SQ6 560 aa11.16□□□□□ -0.62
TPM3-218ENST00000505010 MICALL2Q8IY33 904 aa11.16□□□□□ -0.62
TPM3-218ENST00000505010 REM2Q8IYK8 340 aaPredicted RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms