RNA–Protein interactions for RNA: ENST00000504290.5

TP53-208, Transcript of tumor protein p53, human

TSL 1 (best) BASIC

Gene TP53, Length 2,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TP53-208	ENST00000504290	ME1	P48163	572 aa		13.74	□□□□□ -0.21
TP53-208	ENST00000504290	PROSER3	Q2NL68	480 aa		13.74	□□□□□ -0.21
TP53-208	ENST00000504290	DPCR1	Q3MIW9	517 aa		13.74	□□□□□ -0.21
TP53-208	ENST00000504290	ADAL	Q6DHV7	355 aa		13.74	□□□□□ -0.21
TP53-208	ENST00000504290	LINS1	Q8NG48	757 aa		13.74	□□□□□ -0.21
TP53-208	ENST00000504290	USP28	Q96RU2	1077 aa		13.74	□□□□□ -0.21
TP53-208	ENST00000504290	PRDM11	Q9NQV5	511 aa		13.74	□□□□□ -0.21
TP53-208	ENST00000504290	CYP27B1	O15528	508 aa		13.73	□□□□□ -0.21
TP53-208	ENST00000504290	ARHGAP6	O43182	974 aa		13.73	□□□□□ -0.21
TP53-208	ENST00000504290	NBPF7	P0C2Y1	421 aa	Predicted RBP	13.73	□□□□□ -0.21
TP53-208	ENST00000504290	FANCC	Q00597	558 aa		13.73	□□□□□ -0.21
TP53-208	ENST00000504290	APOBR	Q0VD83	1088 aa		13.73	□□□□□ -0.21
TP53-208	ENST00000504290	TTC5	Q8N0Z6	440 aa		13.73	□□□□□ -0.21
TP53-208	ENST00000504290	UTP14A	Q9BVJ6	771 aa	Known RBP	13.73	□□□□□ -0.21
TP53-208	ENST00000504290	EPC1	Q9H2F5	836 aa		13.73	□□□□□ -0.21
TP53-208	ENST00000504290	DEF6	Q9H4E7	631 aa		13.73	□□□□□ -0.21
TP53-208	ENST00000504290	UTY	O14607	1347 aa		13.73	□□□□□ -0.21
TP53-208	ENST00000504290	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	13.73	□□□□□ -0.21
TP53-208	ENST00000504290	VWA3A	A6NCI4	1184 aa		13.73	□□□□□ -0.21
TP53-208	ENST00000504290	EIF3CL	B5ME19	914 aa	Known RBP	13.73	□□□□□ -0.21
TP53-208	ENST00000504290	EIF3J	O75822	258 aa	Known RBP	13.73	□□□□□ -0.21
TP53-208	ENST00000504290	ATP2B1	P20020	1258 aa		13.73	□□□□□ -0.21
TP53-208	ENST00000504290	NLRP12	P59046	1061 aa		13.73	□□□□□ -0.21
TP53-208	ENST00000504290	TUBB4B	P68371	445 aa		13.73	□□□□□ -0.21
TP53-208	ENST00000504290	NCAPH	Q15003	741 aa		13.73	□□□□□ -0.21
TP53-208	ENST00000504290	PDIA6	Q15084	440 aa		13.73	□□□□□ -0.21
TP53-208	ENST00000504290	HDX	Q7Z353	690 aa		13.73	□□□□□ -0.21
TP53-208	ENST00000504290	PACS2	Q86VP3	889 aa		13.73	□□□□□ -0.21
TP53-208	ENST00000504290	EIF3C	Q99613	913 aa	Known RBP	13.73	□□□□□ -0.21
TP53-208	ENST00000504290	C9orf78	Q9NZ63	289 aa	Predicted RBP	13.73	□□□□□ -0.21
TP53-208	ENST00000504290	PCDH11X	Q9BZA7	1347 aa		13.73	□□□□□ -0.21
TP53-208	ENST00000504290	PCDH11Y	Q9BZA8	1340 aa		13.73	□□□□□ -0.21
TP53-208	ENST00000504290	POTEB2	H3BUK9	544 aa		13.72	□□□□□ -0.21
TP53-208	ENST00000504290	SNRPA1	P09661	255 aa	Known RBP	13.72	□□□□□ -0.21
TP53-208	ENST00000504290	CORO7	P57737	925 aa		13.72	□□□□□ -0.21
TP53-208	ENST00000504290	USPL1	Q5W0Q7	1092 aa		13.72	□□□□□ -0.21
TP53-208	ENST00000504290	SUGP1	Q8IWZ8	645 aa	Known RBP	13.72	□□□□□ -0.21
TP53-208	ENST00000504290	FMNL2	Q96PY5	1086 aa		13.72	□□□□□ -0.21
TP53-208	ENST00000504290	TRAIP	Q9BWF2	469 aa		13.72	□□□□□ -0.21
TP53-208	ENST00000504290	PPP2R2C	Q9Y2T4	447 aa		13.72	□□□□□ -0.21
TP53-208	ENST00000504290	MED23	Q9ULK4	1368 aa		13.72	□□□□□ -0.21
TP53-208	ENST00000504290	PAPPA	Q13219	1627 aa		13.72	□□□□□ -0.21
TP53-208	ENST00000504290	UBR2	Q8IWV8	1755 aa		13.72	□□□□□ -0.21
TP53-208	ENST00000504290	PRAMEF22	A3QJZ6	481 aa		13.72	□□□□□ -0.21
TP53-208	ENST00000504290	NEK1	Q96PY6	1258 aa		13.72	□□□□□ -0.21
TP53-208	ENST00000504290	VPS18	Q9P253	973 aa		13.72	□□□□□ -0.21
TP53-208	ENST00000504290	GLI3	P10071	1580 aa		13.71	□□□□□ -0.21
TP53-208	ENST00000504290	LOC102724159	A0A0B4J2E5	919 aa		13.71	□□□□□ -0.21
TP53-208	ENST00000504290	MYO1B	O43795	1136 aa		13.71	□□□□□ -0.21
TP53-208	ENST00000504290	USP5	P45974	858 aa		13.71	□□□□□ -0.21
TP53-208	ENST00000504290	CABP4	P57796	275 aa		13.71	□□□□□ -0.21
TP53-208	ENST00000504290	GNG11	P61952	73 aa		13.71	□□□□□ -0.21
TP53-208	ENST00000504290	SLC39A6	Q13433	755 aa		13.71	□□□□□ -0.21
TP53-208	ENST00000504290	PWP2	Q15269	919 aa	Known RBP	13.71	□□□□□ -0.21
TP53-208	ENST00000504290	FBXW7	Q969H0	707 aa		13.71	□□□□□ -0.21
TP53-208	ENST00000504290		A6NJR5	290 aa		13.7	□□□□□ -0.22
TP53-208	ENST00000504290	CP	P00450	1065 aa		13.7	□□□□□ -0.22
TP53-208	ENST00000504290	ERCC4	Q92889	916 aa	Predicted RBP	13.7	□□□□□ -0.22
TP53-208	ENST00000504290	SECISBP2L	Q93073	1101 aa	Known RBP	13.7	□□□□□ -0.22
TP53-208	ENST00000504290	SHANK3	Q9BYB0	1731 aa		13.7	□□□□□ -0.22
TP53-208	ENST00000504290	FTO	Q9C0B1	505 aa	Known RBP eCLIP	13.7	□□□□□ -0.22
TP53-208	ENST00000504290	PCDHA7	Q9UN72	937 aa		13.7	□□□□□ -0.22
TP53-208	ENST00000504290		A0A0D9SFI3	127 aa		13.7	□□□□□ -0.22
TP53-208	ENST00000504290	GRM8	O00222	908 aa		13.7	□□□□□ -0.22
TP53-208	ENST00000504290	PFKFB2	O60825	505 aa		13.7	□□□□□ -0.22
TP53-208	ENST00000504290	ERLIN1	O75477	346 aa		13.7	□□□□□ -0.22
TP53-208	ENST00000504290	SLC3A2	P08195	630 aa	Known RBP	13.7	□□□□□ -0.22
TP53-208	ENST00000504290	HSP90B1	P14625	803 aa	Known RBP	13.7	□□□□□ -0.22
TP53-208	ENST00000504290	UBASH3A	P57075	661 aa		13.7	□□□□□ -0.22
TP53-208	ENST00000504290	NEXN	Q0ZGT2	675 aa		13.7	□□□□□ -0.22
TP53-208	ENST00000504290	SCRN1	Q12765	414 aa		13.7	□□□□□ -0.22
TP53-208	ENST00000504290	SWT1	Q5T5J6	900 aa	Known RBP	13.7	□□□□□ -0.22
TP53-208	ENST00000504290		Q6ZUG5	572 aa		13.7	□□□□□ -0.22
TP53-208	ENST00000504290	TOM1L2	Q6ZVM7	507 aa		13.7	□□□□□ -0.22
TP53-208	ENST00000504290	ZNF496	Q96IT1	587 aa	Predicted RBP	13.7	□□□□□ -0.22
TP53-208	ENST00000504290	CARD10	Q9BWT7	1032 aa		13.7	□□□□□ -0.22
TP53-208	ENST00000504290	RTEL1	Q9NZ71	1219 aa		13.7	□□□□□ -0.22
TP53-208	ENST00000504290	TAF6L	Q9Y6J9	622 aa		13.7	□□□□□ -0.22
TP53-208	ENST00000504290	BEND6	Q5SZJ8	279 aa	Predicted RBP	13.69	□□□□□ -0.22
TP53-208	ENST00000504290	RIC3	Q7Z5B4	369 aa		13.69	□□□□□ -0.22
TP53-208	ENST00000504290	VSTM4	Q8IW00	320 aa		13.69	□□□□□ -0.22
TP53-208	ENST00000504290	ZCRB1	Q8TBF4	217 aa	Known RBP	13.69	□□□□□ -0.22
TP53-208	ENST00000504290	PDE11A	Q9HCR9	933 aa		13.69	□□□□□ -0.22
TP53-208	ENST00000504290	RAB21	Q9UL25	225 aa		13.69	□□□□□ -0.22
TP53-208	ENST00000504290	ARFGEF2	Q9Y6D5	1785 aa		13.69	□□□□□ -0.22
TP53-208	ENST00000504290	AFDN	P55196	1824 aa	Known RBP	13.69	□□□□□ -0.22
TP53-208	ENST00000504290	ERVV-2	B6SEH9	535 aa		13.69	□□□□□ -0.22
TP53-208	ENST00000504290	GPR37	O15354	613 aa		13.69	□□□□□ -0.22
TP53-208	ENST00000504290	LMOD1	P29536	600 aa	Predicted RBP	13.69	□□□□□ -0.22
TP53-208	ENST00000504290	NDUFA8	P51970	172 aa		13.69	□□□□□ -0.22
TP53-208	ENST00000504290	AXDND1	Q5T1B0	1012 aa	Predicted RBP	13.69	□□□□□ -0.22
TP53-208	ENST00000504290	AACS	Q86V21	672 aa		13.69	□□□□□ -0.22
TP53-208	ENST00000504290	EFCAB13	Q8IY85	973 aa		13.69	□□□□□ -0.22
TP53-208	ENST00000504290	NSUN7	Q8NE18	718 aa	Known RBP	13.69	□□□□□ -0.22
TP53-208	ENST00000504290	KIFC2	Q96AC6	838 aa		13.69	□□□□□ -0.22
TP53-208	ENST00000504290	CHMP4C	Q96CF2	233 aa		13.69	□□□□□ -0.22
TP53-208	ENST00000504290	WDR24	Q96S15	920 aa		13.69	□□□□□ -0.22
TP53-208	ENST00000504290		A0A1B0GVL5	298 aa		13.68	□□□□□ -0.22
TP53-208	ENST00000504290	STX10	O60499	249 aa		13.68	□□□□□ -0.22
TP53-208	ENST00000504290	TAF5L	O75529	589 aa		13.68	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 180.9 ms