RNA–Protein interactions for RNA: ENST00000503464.1

TOPBP1-203, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-203ENST00000503464 BECN1Q14457 450 aa8.24□□□□□ -1.09
TOPBP1-203ENST00000503464 ALX1Q15699 326 aa8.24□□□□□ -1.09
TOPBP1-203ENST00000503464 AOC3Q16853 763 aa8.24□□□□□ -1.09
TOPBP1-203ENST00000503464 CCDC93Q567U6 631 aa8.24□□□□□ -1.09
TOPBP1-203ENST00000503464 MFSD14BQ5SR56 506 aa8.24□□□□□ -1.09
TOPBP1-203ENST00000503464 CC2D2BQ6DHV5 1058 aa8.24□□□□□ -1.09
TOPBP1-203ENST00000503464 RUFY3Q7L099 469 aa8.24□□□□□ -1.09
TOPBP1-203ENST00000503464 TBC1D10CQ8IV04 446 aa8.24□□□□□ -1.09
TOPBP1-203ENST00000503464 HSCBQ8IWL3 235 aa8.24□□□□□ -1.09
TOPBP1-203ENST00000503464 IFNL3Q8IZI9 196 aa8.24□□□□□ -1.09
TOPBP1-203ENST00000503464 NLGN2Q8NFZ4 835 aa8.24□□□□□ -1.09
TOPBP1-203ENST00000503464 TCEANC2Q96MN5 208 aa8.24□□□□□ -1.09
TOPBP1-203ENST00000503464 PSMD1Q99460 953 aa8.24□□□□□ -1.09
TOPBP1-203ENST00000503464 EYA3Q99504 573 aa8.24□□□□□ -1.09
TOPBP1-203ENST00000503464 CD2APQ9Y5K6 639 aa8.24□□□□□ -1.09
TOPBP1-203ENST00000503464 GAKO14976 1311 aa8.24□□□□□ -1.09
TOPBP1-203ENST00000503464 SIPA1L1O43166 1804 aa8.24□□□□□ -1.09
TOPBP1-203ENST00000503464 SBF1O95248 1867 aa8.23□□□□□ -1.09
TOPBP1-203ENST00000503464 DICER1Q9UPY3 1922 aaKnown RBP8.23□□□□□ -1.09
TOPBP1-203ENST00000503464 SPDYE2BA6NHP3 402 aa8.23□□□□□ -1.09
TOPBP1-203ENST00000503464 PATL2C9JE40 543 aaKnown RBP8.23□□□□□ -1.09
TOPBP1-203ENST00000503464 E7EWF7 191 aa8.23□□□□□ -1.09
TOPBP1-203ENST00000503464 ECE2O60344 883 aa8.23□□□□□ -1.09
TOPBP1-203ENST00000503464 LARGE1O95461 756 aa8.23□□□□□ -1.09
TOPBP1-203ENST00000503464 SPDYE6P0CI01 402 aa8.23□□□□□ -1.09
TOPBP1-203ENST00000503464 ZKSCAN1P17029 563 aaPredicted RBP8.23□□□□□ -1.09
TOPBP1-203ENST00000503464 RPS6KB1P23443 525 aa8.23□□□□□ -1.09
TOPBP1-203ENST00000503464 AK2P54819 239 aa8.23□□□□□ -1.09
TOPBP1-203ENST00000503464 HAND2P61296 217 aa8.23□□□□□ -1.09
TOPBP1-203ENST00000503464 ST3GAL1Q11201 340 aa8.23□□□□□ -1.09
TOPBP1-203ENST00000503464 SPDYE2Q495Y8 402 aa8.23□□□□□ -1.09
TOPBP1-203ENST00000503464 DACT2Q5SW24 774 aa8.23□□□□□ -1.09
TOPBP1-203ENST00000503464 RNF20Q5VTR2 975 aa8.23□□□□□ -1.09
TOPBP1-203ENST00000503464 SPTY2D1Q68D10 685 aaPredicted RBP8.23□□□□□ -1.09
TOPBP1-203ENST00000503464 DZIP1Q86YF9 867 aaKnown RBP8.23□□□□□ -1.09
TOPBP1-203ENST00000503464 ZGPATQ8N5A5 531 aaKnown RBP8.23□□□□□ -1.09
TOPBP1-203ENST00000503464 SDR42E1Q8WUS8 393 aa8.23□□□□□ -1.09
TOPBP1-203ENST00000503464 AATFQ9NY61 560 aaKnown RBP eCLIP8.23□□□□□ -1.09
TOPBP1-203ENST00000503464 PIM2Q9P1W9 311 aa8.23□□□□□ -1.09
TOPBP1-203ENST00000503464 SLC4A4Q9Y6R1 1079 aa8.23□□□□□ -1.09
TOPBP1-203ENST00000503464 MROH7-TTC4A0A0A0MT08 1334 aa8.23□□□□□ -1.09
TOPBP1-203ENST00000503464 NFKBIEO00221 500 aa8.22□□□□□ -1.09
TOPBP1-203ENST00000503464 ST18O60284 1047 aa8.22□□□□□ -1.09
TOPBP1-203ENST00000503464 IGSF3O75054 1194 aa8.22□□□□□ -1.09
TOPBP1-203ENST00000503464 GNAT2P19087 354 aa8.22□□□□□ -1.09
TOPBP1-203ENST00000503464 PRELPP51888 382 aa8.22□□□□□ -1.09
TOPBP1-203ENST00000503464 ANTXR2P58335 489 aa8.22□□□□□ -1.09
TOPBP1-203ENST00000503464 EXOSC10Q01780 885 aaKnown RBP8.22□□□□□ -1.09
TOPBP1-203ENST00000503464 TOB2Q14106 344 aaPredicted RBP8.22□□□□□ -1.09
TOPBP1-203ENST00000503464 DALRD3Q5D0E6 543 aaKnown RBP8.22□□□□□ -1.09
TOPBP1-203ENST00000503464 TMED8Q6PL24 325 aaPredicted RBP8.22□□□□□ -1.09
TOPBP1-203ENST00000503464 PODNQ7Z5L7 613 aa8.22□□□□□ -1.09
TOPBP1-203ENST00000503464 RTKN2Q8IZC4 609 aa8.22□□□□□ -1.09
TOPBP1-203ENST00000503464 SPRYD3Q8NCJ5 442 aa8.22□□□□□ -1.09
TOPBP1-203ENST00000503464 SH3RF3Q8TEJ3 882 aaPredicted RBP8.22□□□□□ -1.09
TOPBP1-203ENST00000503464 TBC1D22AQ8WUA7 517 aa8.22□□□□□ -1.09
TOPBP1-203ENST00000503464 DCBLD2Q96PD2 775 aa8.22□□□□□ -1.09
TOPBP1-203ENST00000503464 NEK1Q96PY6 1258 aa8.22□□□□□ -1.09
TOPBP1-203ENST00000503464 LARP6Q9BRS8 491 aaKnown RBP8.22□□□□□ -1.09
TOPBP1-203ENST00000503464 TMX4Q9H1E5 349 aaPredicted RBP8.22□□□□□ -1.09
TOPBP1-203ENST00000503464 ZNF277Q9NRM2 450 aaPredicted RBP8.22□□□□□ -1.09
TOPBP1-203ENST00000503464 MKRN1Q9UHC7 482 aaKnown RBP8.22□□□□□ -1.09
TOPBP1-203ENST00000503464 NEDD4P46934 1319 aa8.22□□□□□ -1.09
TOPBP1-203ENST00000503464 CYP2D7A0A087X1C5 515 aa8.21□□□□□ -1.1
TOPBP1-203ENST00000503464 GPR75-ASB3A0A0A6YYF3 556 aa8.21□□□□□ -1.1
TOPBP1-203ENST00000503464 PPIP5K2O43314 1243 aa8.21□□□□□ -1.1
TOPBP1-203ENST00000503464 APPP05067 770 aa8.21□□□□□ -1.1
TOPBP1-203ENST00000503464 RHBDL3P58872 404 aa8.21□□□□□ -1.1
TOPBP1-203ENST00000503464 PPP4CP60510 307 aa8.21□□□□□ -1.1
TOPBP1-203ENST00000503464 FKBP1AP62942 108 aaKnown RBP8.21□□□□□ -1.1
TOPBP1-203ENST00000503464 CTDSPL2Q05D32 466 aa8.21□□□□□ -1.1
TOPBP1-203ENST00000503464 CUL4AQ13619 759 aa8.21□□□□□ -1.1
TOPBP1-203ENST00000503464 KRT32Q14532 448 aa8.21□□□□□ -1.1
TOPBP1-203ENST00000503464 IMMTQ16891 758 aaKnown RBP8.21□□□□□ -1.1
TOPBP1-203ENST00000503464 GRIPAP1Q4V328 841 aa8.21□□□□□ -1.1
TOPBP1-203ENST00000503464 BLOC1S2Q6QNY1 142 aa8.21□□□□□ -1.1
TOPBP1-203ENST00000503464 NOL8Q76FK4 1167 aaKnown RBP8.21□□□□□ -1.1
TOPBP1-203ENST00000503464 MB21D2Q8IYB1 491 aaPredicted RBP8.21□□□□□ -1.1
TOPBP1-203ENST00000503464 SUPT20HQ8NEM7 779 aa8.21□□□□□ -1.1
TOPBP1-203ENST00000503464 FAM163AQ96GL9 167 aaPredicted RBP8.21□□□□□ -1.1
TOPBP1-203ENST00000503464 TMX3Q96JJ7 454 aa8.21□□□□□ -1.1
TOPBP1-203ENST00000503464 ALDH8A1Q9H2A2 487 aaPredicted RBP8.21□□□□□ -1.1
TOPBP1-203ENST00000503464 DCP1AQ9NPI6 582 aaPredicted RBP8.21□□□□□ -1.1
TOPBP1-203ENST00000503464 INCENPQ9NQS7 918 aa8.21□□□□□ -1.1
TOPBP1-203ENST00000503464 PDRG1Q9NUG6 133 aa8.21□□□□□ -1.1
TOPBP1-203ENST00000503464 PPP1R1BQ9UD71 204 aaPredicted RBP8.21□□□□□ -1.1
TOPBP1-203ENST00000503464 CTNNA3Q9UI47 895 aa8.21□□□□□ -1.1
TOPBP1-203ENST00000503464 DAGLAQ9Y4D2 1042 aa8.21□□□□□ -1.1
TOPBP1-203ENST00000503464 PCDHAC2Q9Y5I4 1007 aa8.21□□□□□ -1.1
TOPBP1-203ENST00000503464 CYP46A1Q9Y6A2 500 aa8.21□□□□□ -1.1
TOPBP1-203ENST00000503464 MYH8P13535 1937 aa8.21□□□□□ -1.1
TOPBP1-203ENST00000503464 F8W031 263 aaPredicted RBP8.2□□□□□ -1.1
TOPBP1-203ENST00000503464 ZNF213O14771 459 aa8.2□□□□□ -1.1
TOPBP1-203ENST00000503464 CYP2D6P10635 497 aa8.2□□□□□ -1.1
TOPBP1-203ENST00000503464 PSMA5P28066 241 aa8.2□□□□□ -1.1
TOPBP1-203ENST00000503464 BTDP43251 543 aa8.2□□□□□ -1.1
TOPBP1-203ENST00000503464 GSTO1P78417 241 aa8.2□□□□□ -1.1
TOPBP1-203ENST00000503464 STRIP1Q5VSL9 837 aa8.2□□□□□ -1.1
TOPBP1-203ENST00000503464 CTR9Q6PD62 1173 aa8.2□□□□□ -1.1
TOPBP1-203ENST00000503464 CHST3Q7LGC8 479 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms