RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 ZSWIM9Q86XI8 627 aa4.76□□□□□ -1.65
HMGB1P35-201ENST00000503360 CCNJLQ8IV13 435 aa4.76□□□□□ -1.65
HMGB1P35-201ENST00000503360 ASAP3Q8TDY4 903 aa4.76□□□□□ -1.65
HMGB1P35-201ENST00000503360 STK32AQ8WU08 396 aa4.76□□□□□ -1.65
HMGB1P35-201ENST00000503360 RAD18Q9NS91 495 aa4.76□□□□□ -1.65
HMGB1P35-201ENST00000503360 AMOTL2Q9Y2J4 779 aa4.76□□□□□ -1.65
HMGB1P35-201ENST00000503360 A0A096LPE4 126 aa4.75□□□□□ -1.65
HMGB1P35-201ENST00000503360 A0A1W2PPZ6 126 aa4.75□□□□□ -1.65
HMGB1P35-201ENST00000503360 LRRC10BA6NIK2 292 aa4.75□□□□□ -1.65
HMGB1P35-201ENST00000503360 AOC2O75106 756 aa4.75□□□□□ -1.65
HMGB1P35-201ENST00000503360 B3GALT4O96024 378 aa4.75□□□□□ -1.65
HMGB1P35-201ENST00000503360 NPR3P17342 541 aa4.75□□□□□ -1.65
HMGB1P35-201ENST00000503360 CFPP27918 469 aa4.75□□□□□ -1.65
HMGB1P35-201ENST00000503360 BNIP3Q12983 259 aa4.75□□□□□ -1.65
HMGB1P35-201ENST00000503360 ZNF423Q2M1K9 1284 aa4.75□□□□□ -1.65
HMGB1P35-201ENST00000503360 C8orf34Q49A92 452 aa4.75□□□□□ -1.65
HMGB1P35-201ENST00000503360 AKAP4Q5JQC9 854 aa4.75□□□□□ -1.65
HMGB1P35-201ENST00000503360 ANGEL2Q5VTE6 544 aaKnown RBP4.75□□□□□ -1.65
HMGB1P35-201ENST00000503360 TTLL10Q6ZVT0 673 aa4.75□□□□□ -1.65
HMGB1P35-201ENST00000503360 PLD6Q8N2A8 252 aaKnown RBP4.75□□□□□ -1.65
HMGB1P35-201ENST00000503360 KRTAP17-1Q9BYP8 105 aa4.75□□□□□ -1.65
HMGB1P35-201ENST00000503360 KRTAP9-3Q9BYQ3 159 aa4.75□□□□□ -1.65
HMGB1P35-201ENST00000503360 TNKS2Q9H2K2 1166 aa4.75□□□□□ -1.65
HMGB1P35-201ENST00000503360 DYNC1LI2O43237 492 aaPredicted RBP4.74□□□□□ -1.65
HMGB1P35-201ENST00000503360 HNRNPUQ00839 825 aaKnown RBP eCLIP4.74□□□□□ -1.65
HMGB1P35-201ENST00000503360 AP3B2Q13367 1082 aa4.74□□□□□ -1.65
HMGB1P35-201ENST00000503360 CDCA8Q53HL2 280 aa4.74□□□□□ -1.65
HMGB1P35-201ENST00000503360 HRASLS5Q96KN8 279 aa4.74□□□□□ -1.65
HMGB1P35-201ENST00000503360 CORO1BQ9BR76 489 aa4.74□□□□□ -1.65
HMGB1P35-201ENST00000503360 C1orf115Q9H7X2 142 aa4.74□□□□□ -1.65
HMGB1P35-201ENST00000503360 ZNF777Q9ULD5 760 aaPredicted RBP4.74□□□□□ -1.65
HMGB1P35-201ENST00000503360 DAGLAQ9Y4D2 1042 aa4.74□□□□□ -1.65
HMGB1P35-201ENST00000503360 ZNF503-AS2A6NEH8 195 aa4.73□□□□□ -1.65
HMGB1P35-201ENST00000503360 B8ZZF3 427 aa4.73□□□□□ -1.65
HMGB1P35-201ENST00000503360 CEACAM5P06731 702 aa4.73□□□□□ -1.65
HMGB1P35-201ENST00000503360 CTSBP07858 339 aa4.73□□□□□ -1.65
HMGB1P35-201ENST00000503360 ZNF865P0CJ78 1059 aaPredicted RBP4.73□□□□□ -1.65
HMGB1P35-201ENST00000503360 EIF1AXP47813 144 aaKnown RBP4.73□□□□□ -1.65
HMGB1P35-201ENST00000503360 PTPN12Q05209 780 aaKnown RBP4.73□□□□□ -1.65
HMGB1P35-201ENST00000503360 TMEM164Q5U3C3 297 aa4.73□□□□□ -1.65
HMGB1P35-201ENST00000503360 LCNL1Q6ZST4 164 aa4.73□□□□□ -1.65
HMGB1P35-201ENST00000503360 ANKLE2Q86XL3 938 aa4.73□□□□□ -1.65
HMGB1P35-201ENST00000503360 TRIM56Q9BRZ2 755 aaKnown RBP4.73□□□□□ -1.65
HMGB1P35-201ENST00000503360 ATXN3LQ9H3M9 355 aa4.73□□□□□ -1.65
HMGB1P35-201ENST00000503360 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.73□□□□□ -1.65
HMGB1P35-201ENST00000503360 CRIM1Q9NZV1 1036 aa4.73□□□□□ -1.65
HMGB1P35-201ENST00000503360 AP4E1Q9UPM8 1137 aa4.73□□□□□ -1.65
HMGB1P35-201ENST00000503360 ITPKAP23677 461 aa4.72□□□□□ -1.65
HMGB1P35-201ENST00000503360 OXCT1P55809 520 aa4.72□□□□□ -1.65
HMGB1P35-201ENST00000503360 KCNMB1Q16558 191 aa4.72□□□□□ -1.65
HMGB1P35-201ENST00000503360 AOC3Q16853 763 aa4.72□□□□□ -1.65
HMGB1P35-201ENST00000503360 LRRC56Q8IYG6 542 aaPredicted RBP4.72□□□□□ -1.65
HMGB1P35-201ENST00000503360 TCF12Q99081 682 aa4.72□□□□□ -1.65
HMGB1P35-201ENST00000503360 ARID3AQ99856 593 aa4.72□□□□□ -1.65
HMGB1P35-201ENST00000503360 WDR18Q9BV38 432 aa4.72□□□□□ -1.65
HMGB1P35-201ENST00000503360 ZFYVE28Q9HCC9 887 aa4.72□□□□□ -1.65
HMGB1P35-201ENST00000503360 SEPT3Q9UH03 358 aa4.72□□□□□ -1.65
HMGB1P35-201ENST00000503360 TMPRSS2O15393 492 aa4.71□□□□□ -1.66
HMGB1P35-201ENST00000503360 FAM87AP0C7U9 286 aa4.71□□□□□ -1.66
HMGB1P35-201ENST00000503360 ATP2B4P23634 1241 aa4.71□□□□□ -1.66
HMGB1P35-201ENST00000503360 AFMP43652 599 aa4.71□□□□□ -1.66
HMGB1P35-201ENST00000503360 GALNT12Q8IXK2 581 aa4.71□□□□□ -1.66
HMGB1P35-201ENST00000503360 ASB11Q8WXH4 323 aa4.71□□□□□ -1.66
HMGB1P35-201ENST00000503360 KRT82Q9NSB4 513 aa4.71□□□□□ -1.66
HMGB1P35-201ENST00000503360 PPP1R9AQ9ULJ8 1098 aa4.71□□□□□ -1.66
HMGB1P35-201ENST00000503360 A6NHS1 94 aa4.7□□□□□ -1.66
HMGB1P35-201ENST00000503360 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P35-201ENST00000503360 IGF2BP3O00425 579 aaKnown RBP eCLIP4.7□□□□□ -1.66
HMGB1P35-201ENST00000503360 SLFN14P0C7P3 912 aa4.7□□□□□ -1.66
HMGB1P35-201ENST00000503360 ZSCAN22P10073 491 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P35-201ENST00000503360 RPS26P11Q5JNZ5 115 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P35-201ENST00000503360 KIAA0319Q5VV43 1072 aa4.7□□□□□ -1.66
HMGB1P35-201ENST00000503360 FAM181AQ8N9Y4 354 aa4.7□□□□□ -1.66
HMGB1P35-201ENST00000503360 LATS2Q9NRM7 1088 aa4.7□□□□□ -1.66
HMGB1P35-201ENST00000503360 LMCD1Q9NZU5 365 aa4.7□□□□□ -1.66
HMGB1P35-201ENST00000503360 POLIQ9UNA4 740 aa4.7□□□□□ -1.66
HMGB1P35-201ENST00000503360 PLAGL2Q9UPG8 496 aa4.7□□□□□ -1.66
HMGB1P35-201ENST00000503360 A0A1W2PP55 124 aa4.69□□□□□ -1.66
HMGB1P35-201ENST00000503360 METTL12A8MUP2 240 aa4.69□□□□□ -1.66
HMGB1P35-201ENST00000503360 GLI1P08151 1106 aa4.69□□□□□ -1.66
HMGB1P35-201ENST00000503360 GRIA4P48058 902 aa4.69□□□□□ -1.66
HMGB1P35-201ENST00000503360 MLANAQ16655 118 aa4.69□□□□□ -1.66
HMGB1P35-201ENST00000503360 SMYD4Q8IYR2 804 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P35-201ENST00000503360 GJD3Q8N144 294 aa4.69□□□□□ -1.66
HMGB1P35-201ENST00000503360 CCDC82Q8N4S0 544 aa4.69□□□□□ -1.66
HMGB1P35-201ENST00000503360 DUSP23Q9BVJ7 150 aa4.69□□□□□ -1.66
HMGB1P35-201ENST00000503360 LIN7BQ9HAP6 207 aa4.69□□□□□ -1.66
HMGB1P35-201ENST00000503360 PIDD1Q9HB75 910 aa4.69□□□□□ -1.66
HMGB1P35-201ENST00000503360 FOXD3Q9UJU5 478 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P35-201ENST00000503360 PCOLCE2Q9UKZ9 415 aa4.69□□□□□ -1.66
HMGB1P35-201ENST00000503360 CTNND2Q9UQB3 1225 aa4.69□□□□□ -1.66
HMGB1P35-201ENST00000503360 PCDHGC5Q9Y5F6 944 aa4.69□□□□□ -1.66
HMGB1P35-201ENST00000503360 FAM13AO94988 1023 aa4.68□□□□□ -1.66
HMGB1P35-201ENST00000503360 MPSTP25325 297 aa4.68□□□□□ -1.66
HMGB1P35-201ENST00000503360 ID3Q02535 119 aa4.68□□□□□ -1.66
HMGB1P35-201ENST00000503360 CDK5R2Q13319 367 aa4.68□□□□□ -1.66
HMGB1P35-201ENST00000503360 KIF4BQ2VIQ3 1234 aa4.68□□□□□ -1.66
HMGB1P35-201ENST00000503360 FANCD2OSQ96PS1 177 aa4.68□□□□□ -1.66
HMGB1P35-201ENST00000503360 ZNF576Q9H609 170 aa4.68□□□□□ -1.66
HMGB1P35-201ENST00000503360 SLAIN2Q9P270 581 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms