RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.76□□□□□ -1.17
HMGB1P3-201ENST00000502802 ELOA3CA0A087WX78 387 aaPredicted RBP7.75□□□□□ -1.17
HMGB1P3-201ENST00000502802 ELOA3DA6NLF2 546 aaPredicted RBP7.75□□□□□ -1.17
HMGB1P3-201ENST00000502802 C11orf95C9JLR9 678 aaPredicted RBP7.75□□□□□ -1.17
HMGB1P3-201ENST00000502802 H3BRJ5 948 aa7.75□□□□□ -1.17
HMGB1P3-201ENST00000502802 RGS9O75916 674 aaPredicted RBP7.75□□□□□ -1.17
HMGB1P3-201ENST00000502802 CLSTN1O94985 981 aa7.75□□□□□ -1.17
HMGB1P3-201ENST00000502802 GSTP1P09211 210 aaKnown RBP7.75□□□□□ -1.17
HMGB1P3-201ENST00000502802 HSD3B2P26439 372 aa7.75□□□□□ -1.17
HMGB1P3-201ENST00000502802 PTPN11Q06124 597 aaPredicted RBP7.75□□□□□ -1.17
HMGB1P3-201ENST00000502802 RASA3Q14644 834 aa7.75□□□□□ -1.17
HMGB1P3-201ENST00000502802 TCEAL1Q15170 157 aa7.75□□□□□ -1.17
HMGB1P3-201ENST00000502802 ELOA3BQ3SY89 546 aa7.75□□□□□ -1.17
HMGB1P3-201ENST00000502802 RBBP8NLQ8NC74 664 aaPredicted RBP7.75□□□□□ -1.17
HMGB1P3-201ENST00000502802 ELOA3Q8NG57 546 aa7.75□□□□□ -1.17
HMGB1P3-201ENST00000502802 CCDC113Q9H0I3 377 aa7.75□□□□□ -1.17
HMGB1P3-201ENST00000502802 SOX17Q9H6I2 414 aaPredicted RBP7.75□□□□□ -1.17
HMGB1P3-201ENST00000502802 EHMT1Q9H9B1 1298 aa7.75□□□□□ -1.17
HMGB1P3-201ENST00000502802 ACTR10Q9NZ32 417 aa7.75□□□□□ -1.17
HMGB1P3-201ENST00000502802 NEURL1BA8MQ27 555 aa7.74□□□□□ -1.17
HMGB1P3-201ENST00000502802 EIF4EBP3O60516 100 aaPredicted RBP7.74□□□□□ -1.17
HMGB1P3-201ENST00000502802 ALAS2P22557 587 aa7.74□□□□□ -1.17
HMGB1P3-201ENST00000502802 GAS6Q14393 721 aa7.74□□□□□ -1.17
HMGB1P3-201ENST00000502802 MAP1SQ66K74 1059 aaPredicted RBP7.74□□□□□ -1.17
HMGB1P3-201ENST00000502802 KANK3Q6NY19 840 aa7.74□□□□□ -1.17
HMGB1P3-201ENST00000502802 ANKRD13AQ8IZ07 590 aa7.74□□□□□ -1.17
HMGB1P3-201ENST00000502802 MBIPQ9NS73 344 aa7.74□□□□□ -1.17
HMGB1P3-201ENST00000502802 MSRB2Q9Y3D2 182 aa7.74□□□□□ -1.17
HMGB1P3-201ENST00000502802 PCDHB14Q9Y5E9 798 aa7.74□□□□□ -1.17
HMGB1P3-201ENST00000502802 FAM221BA6H8Z2 402 aa7.73□□□□□ -1.17
HMGB1P3-201ENST00000502802 CCDC85CA6NKD9 419 aa7.73□□□□□ -1.17
HMGB1P3-201ENST00000502802 ATE1O95260 518 aa7.73□□□□□ -1.17
HMGB1P3-201ENST00000502802 ARL4DP49703 201 aa7.73□□□□□ -1.17
HMGB1P3-201ENST00000502802 GSTM4Q03013 218 aa7.73□□□□□ -1.17
HMGB1P3-201ENST00000502802 MPRIPQ6WCQ1 1025 aa7.73□□□□□ -1.17
HMGB1P3-201ENST00000502802 LSRQ86X29 649 aaPredicted RBP7.73□□□□□ -1.17
HMGB1P3-201ENST00000502802 IL22RA1Q8N6P7 574 aa7.73□□□□□ -1.17
HMGB1P3-201ENST00000502802 CELF2-AS1Q8N7Q2 184 aa7.73□□□□□ -1.17
HMGB1P3-201ENST00000502802 NUDT8Q8WV74 236 aa7.73□□□□□ -1.17
HMGB1P3-201ENST00000502802 KCNB2Q92953 911 aa7.73□□□□□ -1.17
HMGB1P3-201ENST00000502802 CACNA2D2Q9NY47 1150 aa7.73□□□□□ -1.17
HMGB1P3-201ENST00000502802 GGA1Q9UJY5 639 aa7.73□□□□□ -1.17
HMGB1P3-201ENST00000502802 POLR3KQ9Y2Y1 108 aaPredicted RBP7.73□□□□□ -1.17
HMGB1P3-201ENST00000502802 ENPP3O14638 875 aa7.72□□□□□ -1.17
HMGB1P3-201ENST00000502802 CDC25BP30305 580 aa7.72□□□□□ -1.17
HMGB1P3-201ENST00000502802 GRIK5Q16478 980 aa7.72□□□□□ -1.17
HMGB1P3-201ENST00000502802 DDR2Q16832 855 aa7.72□□□□□ -1.17
HMGB1P3-201ENST00000502802 SLC7A3Q8WY07 619 aa7.72□□□□□ -1.17
HMGB1P3-201ENST00000502802 RNPC3Q96LT9 517 aaKnown RBP7.72□□□□□ -1.17
HMGB1P3-201ENST00000502802 ST7Q9NRC1 585 aa7.72□□□□□ -1.17
HMGB1P3-201ENST00000502802 PPME1Q9Y570 386 aa7.72□□□□□ -1.17
HMGB1P3-201ENST00000502802 GRIN3BO60391 1043 aa7.71□□□□□ -1.18
HMGB1P3-201ENST00000502802 CYP11A1P05108 521 aa7.71□□□□□ -1.18
HMGB1P3-201ENST00000502802 CASP7P55210 303 aa7.71□□□□□ -1.18
HMGB1P3-201ENST00000502802 PIP4K2BP78356 416 aa7.71□□□□□ -1.18
HMGB1P3-201ENST00000502802 FXNQ16595 210 aa7.71□□□□□ -1.18
HMGB1P3-201ENST00000502802 HGSNATQ68CP4 663 aa7.71□□□□□ -1.18
HMGB1P3-201ENST00000502802 FAM117BQ6P1L5 589 aa7.71□□□□□ -1.18
HMGB1P3-201ENST00000502802 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.71□□□□□ -1.18
HMGB1P3-201ENST00000502802 WNT8BQ93098 351 aa7.71□□□□□ -1.18
HMGB1P3-201ENST00000502802 IRX2Q9BZI1 471 aaPredicted RBP7.71□□□□□ -1.18
HMGB1P3-201ENST00000502802 JPH1Q9HDC5 661 aaPredicted RBP7.71□□□□□ -1.18
HMGB1P3-201ENST00000502802 PCDHA4Q9UN74 947 aa7.71□□□□□ -1.18
HMGB1P3-201ENST00000502802 LINC01387J3KSC0 135 aa7.7□□□□□ -1.18
HMGB1P3-201ENST00000502802 BAG6P46379 1132 aa7.7□□□□□ -1.18
HMGB1P3-201ENST00000502802 C19orf57Q0VDD7 668 aa7.7□□□□□ -1.18
HMGB1P3-201ENST00000502802 GOLGA6L1Q8N7Z2 621 aa7.7□□□□□ -1.18
HMGB1P3-201ENST00000502802 GPBAR1Q8TDU6 330 aa7.7□□□□□ -1.18
HMGB1P3-201ENST00000502802 ACSBG1Q96GR2 724 aa7.7□□□□□ -1.18
HMGB1P3-201ENST00000502802 CORO1BQ9BR76 489 aa7.7□□□□□ -1.18
HMGB1P3-201ENST00000502802 ZC3H12CQ9C0D7 883 aaKnown RBP7.7□□□□□ -1.18
HMGB1P3-201ENST00000502802 TNKS2Q9H2K2 1166 aa7.7□□□□□ -1.18
HMGB1P3-201ENST00000502802 OSGEPQ9NPF4 335 aa7.7□□□□□ -1.18
HMGB1P3-201ENST00000502802 KRT82Q9NSB4 513 aa7.7□□□□□ -1.18
HMGB1P3-201ENST00000502802 STARD13Q9Y3M8 1113 aa7.7□□□□□ -1.18
HMGB1P3-201ENST00000502802 GFRA2O00451 464 aa7.69□□□□□ -1.18
HMGB1P3-201ENST00000502802 PDPK1O15530 556 aa7.69□□□□□ -1.18
HMGB1P3-201ENST00000502802 CDK8P49336 464 aa7.69□□□□□ -1.18
HMGB1P3-201ENST00000502802 CHMP4BP1P59074 171 aa7.69□□□□□ -1.18
HMGB1P3-201ENST00000502802 IFRD2Q12894 506 aaPredicted RBP7.69□□□□□ -1.18
HMGB1P3-201ENST00000502802 POU4F3Q15319 338 aa7.69□□□□□ -1.18
HMGB1P3-201ENST00000502802 PPP2R5EQ16537 467 aa7.69□□□□□ -1.18
HMGB1P3-201ENST00000502802 LRRFIP1Q32MZ4 808 aaKnown RBP7.69□□□□□ -1.18
HMGB1P3-201ENST00000502802 LARP1BQ659C4 914 aaKnown RBP7.69□□□□□ -1.18
HMGB1P3-201ENST00000502802 TXNDC11Q6PKC3 985 aa7.69□□□□□ -1.18
HMGB1P3-201ENST00000502802 C20orf204Q6ZNR8 217 aa7.69□□□□□ -1.18
HMGB1P3-201ENST00000502802 GPR161Q8N6U8 529 aaKnown RBP7.69□□□□□ -1.18
HMGB1P3-201ENST00000502802 C19orf47Q8N9M1 422 aaKnown RBP7.69□□□□□ -1.18
HMGB1P3-201ENST00000502802 GDF2Q9UK05 429 aaPredicted RBP7.69□□□□□ -1.18
HMGB1P3-201ENST00000502802 MAPK8IP1Q9UQF2 711 aa7.69□□□□□ -1.18
HMGB1P3-201ENST00000502802 SNCAIPQ9Y6H5 919 aa7.69□□□□□ -1.18
HMGB1P3-201ENST00000502802 PRR36Q9H6K5 1346 aa7.69□□□□□ -1.18
HMGB1P3-201ENST00000502802 IGF1RP08069 1367 aa7.69□□□□□ -1.18
HMGB1P3-201ENST00000502802 SELPP16109 830 aa7.68□□□□□ -1.18
HMGB1P3-201ENST00000502802 HNRNPUQ00839 825 aaKnown RBP eCLIP7.68□□□□□ -1.18
HMGB1P3-201ENST00000502802 RASGRF1Q13972 1273 aa7.68□□□□□ -1.18
HMGB1P3-201ENST00000502802 SLCO4C1Q6ZQN7 724 aa7.68□□□□□ -1.18
HMGB1P3-201ENST00000502802 DNAJC7Q99615 494 aa7.68□□□□□ -1.18
HMGB1P3-201ENST00000502802 NRSN2Q9GZP1 204 aa7.68□□□□□ -1.18
HMGB1P3-201ENST00000502802 NXF1Q9UBU9 619 aaKnown RBP7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms