RNA–Protein interactions for RNA: ENST00000499125.3

HMGN1P12-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 12, humanhuman

BASIC

Gene HMGN1P12, Length 195 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P12-201ENST00000499125 NDUFB5O43674 189 aa6.37□□□□□ -1.39
HMGN1P12-201ENST00000499125 CPNE3O75131 537 aaKnown RBP6.37□□□□□ -1.39
HMGN1P12-201ENST00000499125 ORC1Q13415 861 aa6.37□□□□□ -1.39
HMGN1P12-201ENST00000499125 B4GALNT3Q6L9W6 998 aa6.37□□□□□ -1.39
HMGN1P12-201ENST00000499125 WDR18Q9BV38 432 aa6.37□□□□□ -1.39
HMGN1P12-201ENST00000499125 TUT1Q9H6E5 874 aaKnown RBP6.37□□□□□ -1.39
HMGN1P12-201ENST00000499125 NPHS2Q9NP85 383 aa6.37□□□□□ -1.39
HMGN1P12-201ENST00000499125 PPP1R9AQ9ULJ8 1098 aa6.37□□□□□ -1.39
HMGN1P12-201ENST00000499125 SYNGAP1Q96PV0 1343 aa6.36□□□□□ -1.39
HMGN1P12-201ENST00000499125 SLFN14P0C7P3 912 aa6.36□□□□□ -1.39
HMGN1P12-201ENST00000499125 LIG1P18858 919 aa6.36□□□□□ -1.39
HMGN1P12-201ENST00000499125 PTPN12Q05209 780 aaKnown RBP6.36□□□□□ -1.39
HMGN1P12-201ENST00000499125 PLCL1Q15111 1095 aa6.36□□□□□ -1.39
HMGN1P12-201ENST00000499125 STK11IPQ8N1F8 1099 aa6.36□□□□□ -1.39
HMGN1P12-201ENST00000499125 POU5F2Q8N7G0 328 aa6.36□□□□□ -1.39
HMGN1P12-201ENST00000499125 BCL7CQ8WUZ0 217 aaPredicted RBP6.36□□□□□ -1.39
HMGN1P12-201ENST00000499125 PIDD1Q9HB75 910 aa6.36□□□□□ -1.39
HMGN1P12-201ENST00000499125 GADD45BO75293 160 aaPredicted RBP6.35□□□□□ -1.39
HMGN1P12-201ENST00000499125 SERPINB4P48594 390 aa6.35□□□□□ -1.39
HMGN1P12-201ENST00000499125 ZNF157P51786 506 aaPredicted RBP6.35□□□□□ -1.39
HMGN1P12-201ENST00000499125 TMC1Q8TDI8 760 aa6.35□□□□□ -1.39
HMGN1P12-201ENST00000499125 ZC3H12CQ9C0D7 883 aaKnown RBP6.35□□□□□ -1.39
HMGN1P12-201ENST00000499125 TMEM238LA0A1B0GVL6 79 aa6.34□□□□□ -1.39
HMGN1P12-201ENST00000499125 BIN1O00499 593 aa6.34□□□□□ -1.39
HMGN1P12-201ENST00000499125 C8AP07357 584 aa6.34□□□□□ -1.39
HMGN1P12-201ENST00000499125 ARHGAP4P98171 946 aa6.34□□□□□ -1.39
HMGN1P12-201ENST00000499125 ECM1Q16610 540 aa6.34□□□□□ -1.39
HMGN1P12-201ENST00000499125 RPS26P11Q5JNZ5 115 aaPredicted RBP6.34□□□□□ -1.39
HMGN1P12-201ENST00000499125 ZNF574Q6ZN55 896 aaPredicted RBP6.34□□□□□ -1.39
HMGN1P12-201ENST00000499125 SPRED2Q7Z698 418 aa6.34□□□□□ -1.39
HMGN1P12-201ENST00000499125 CCDC74AQ96AQ1 378 aa6.34□□□□□ -1.39
HMGN1P12-201ENST00000499125 WDR89Q96FK6 387 aaPredicted RBP6.34□□□□□ -1.39
HMGN1P12-201ENST00000499125 CITED4Q96RK1 184 aa6.34□□□□□ -1.39
HMGN1P12-201ENST00000499125 ATXN3LQ9H3M9 355 aa6.34□□□□□ -1.39
HMGN1P12-201ENST00000499125 CCDC86Q9H6F5 360 aaKnown RBP6.34□□□□□ -1.39
HMGN1P12-201ENST00000499125 ABCB6Q9NP58 842 aa6.34□□□□□ -1.39
HMGN1P12-201ENST00000499125 CRIM1Q9NZV1 1036 aa6.34□□□□□ -1.39
HMGN1P12-201ENST00000499125 EIF1AYO14602 144 aaKnown RBP6.33□□□□□ -1.4
HMGN1P12-201ENST00000499125 TMPRSS2O15393 492 aa6.33□□□□□ -1.4
HMGN1P12-201ENST00000499125 FAM87AP0C7U9 286 aa6.33□□□□□ -1.4
HMGN1P12-201ENST00000499125 HNRNPUQ00839 825 aaKnown RBP eCLIP6.33□□□□□ -1.4
HMGN1P12-201ENST00000499125 ID3Q02535 119 aa6.33□□□□□ -1.4
HMGN1P12-201ENST00000499125 BNIP3Q12983 259 aa6.33□□□□□ -1.4
HMGN1P12-201ENST00000499125 CDK5R2Q13319 367 aa6.33□□□□□ -1.4
HMGN1P12-201ENST00000499125 ZNF792Q3KQV3 632 aa6.33□□□□□ -1.4
HMGN1P12-201ENST00000499125 MISP3Q96FF7 219 aa6.33□□□□□ -1.4
HMGN1P12-201ENST00000499125 FANCD2OSQ96PS1 177 aa6.33□□□□□ -1.4
HMGN1P12-201ENST00000499125 FAM129BQ96TA1 746 aa6.33□□□□□ -1.4
HMGN1P12-201ENST00000499125 NIF3L1Q9GZT8 377 aa6.33□□□□□ -1.4
HMGN1P12-201ENST00000499125 DNAJC25Q9H1X3 360 aa6.33□□□□□ -1.4
HMGN1P12-201ENST00000499125 C1orf115Q9H7X2 142 aa6.33□□□□□ -1.4
HMGN1P12-201ENST00000499125 TRAK1Q9UPV9 953 aa6.33□□□□□ -1.4
HMGN1P12-201ENST00000499125 USTQ9Y2C2 406 aa6.33□□□□□ -1.4
HMGN1P12-201ENST00000499125 GTF3C3Q9Y5Q9 886 aa6.33□□□□□ -1.4
HMGN1P12-201ENST00000499125 PRPF40BQ6NWY9 871 aaKnown RBP6.32□□□□□ -1.4
HMGN1P12-201ENST00000499125 SMYD4Q8IYR2 804 aaPredicted RBP6.32□□□□□ -1.4
HMGN1P12-201ENST00000499125 PLD6Q8N2A8 252 aaKnown RBP6.32□□□□□ -1.4
HMGN1P12-201ENST00000499125 NETO1Q8TDF5 533 aa6.32□□□□□ -1.4
HMGN1P12-201ENST00000499125 PPP4R2Q9NY27 417 aa6.32□□□□□ -1.4
HMGN1P12-201ENST00000499125 RNGTTO60942 597 aaKnown RBP6.31□□□□□ -1.4
HMGN1P12-201ENST00000499125 PAPLNO95428 1278 aa6.31□□□□□ -1.4
HMGN1P12-201ENST00000499125 JAG1P78504 1218 aa6.31□□□□□ -1.4
HMGN1P12-201ENST00000499125 FAAP100Q0VG06 881 aa6.31□□□□□ -1.4
HMGN1P12-201ENST00000499125 FAM181AQ8N9Y4 354 aa6.31□□□□□ -1.4
HMGN1P12-201ENST00000499125 DISC1Q9NRI5 854 aa6.31□□□□□ -1.4
HMGN1P12-201ENST00000499125 ZNF862O60290 1169 aa6.3□□□□□ -1.4
HMGN1P12-201ENST00000499125 GSTP1P09211 210 aaKnown RBP6.3□□□□□ -1.4
HMGN1P12-201ENST00000499125 CD8BP10966 210 aa6.3□□□□□ -1.4
HMGN1P12-201ENST00000499125 PPP2R3AQ06190 1150 aa6.3□□□□□ -1.4
HMGN1P12-201ENST00000499125 GRM2Q14416 872 aa6.3□□□□□ -1.4
HMGN1P12-201ENST00000499125 TTLL4Q14679 1199 aa6.3□□□□□ -1.4
HMGN1P12-201ENST00000499125 DTHD1Q6ZMT9 781 aa6.3□□□□□ -1.4
HMGN1P12-201ENST00000499125 ARHGAP27Q6ZUM4 889 aa6.3□□□□□ -1.4
HMGN1P12-201ENST00000499125 KRT82Q9NSB4 513 aa6.3□□□□□ -1.4
HMGN1P12-201ENST00000499125 VAV3Q9UKW4 847 aa6.3□□□□□ -1.4
HMGN1P12-201ENST00000499125 PCOLCE2Q9UKZ9 415 aa6.3□□□□□ -1.4
HMGN1P12-201ENST00000499125 GPR182O15218 404 aa6.29□□□□□ -1.4
HMGN1P12-201ENST00000499125 HCLS1P14317 486 aaPredicted RBP6.29□□□□□ -1.4
HMGN1P12-201ENST00000499125 FUT4P22083 530 aa6.29□□□□□ -1.4
HMGN1P12-201ENST00000499125 KIF4BQ2VIQ3 1234 aa6.29□□□□□ -1.4
HMGN1P12-201ENST00000499125 WFDC3Q8IUB2 231 aa6.29□□□□□ -1.4
HMGN1P12-201ENST00000499125 EPS8L3Q8TE67 593 aaKnown RBP6.29□□□□□ -1.4
HMGN1P12-201ENST00000499125 KCNB2Q92953 911 aa6.29□□□□□ -1.4
HMGN1P12-201ENST00000499125 SSU72Q9NP77 194 aaKnown RBP6.29□□□□□ -1.4
HMGN1P12-201ENST00000499125 TMEM39AQ9NV64 488 aa6.29□□□□□ -1.4
HMGN1P12-201ENST00000499125 GPN3Q9UHW5 284 aaPredicted RBP6.29□□□□□ -1.4
HMGN1P12-201ENST00000499125 FCGRTP55899 365 aa6.28□□□□□ -1.4
HMGN1P12-201ENST00000499125 PRKCQQ04759 706 aa6.28□□□□□ -1.4
HMGN1P12-201ENST00000499125 ZNF648Q5T619 568 aaPredicted RBP6.28□□□□□ -1.4
HMGN1P12-201ENST00000499125 ATG4DQ86TL0 474 aaPredicted RBP6.28□□□□□ -1.4
HMGN1P12-201ENST00000499125 GLIS3Q8NEA6 775 aa6.28□□□□□ -1.4
HMGN1P12-201ENST00000499125 PI4K2BQ8TCG2 481 aa6.28□□□□□ -1.4
HMGN1P12-201ENST00000499125 CSRNP1Q96S65 589 aa6.28□□□□□ -1.4
HMGN1P12-201ENST00000499125 RC3H2Q9HBD1 1191 aaKnown RBP6.28□□□□□ -1.4
HMGN1P12-201ENST00000499125 NLRP2Q9NX02 1062 aa6.28□□□□□ -1.4
HMGN1P12-201ENST00000499125 LEFTY1O75610 366 aa6.27□□□□□ -1.41
HMGN1P12-201ENST00000499125 IFI16Q16666 785 aaKnown RBP6.27□□□□□ -1.41
HMGN1P12-201ENST00000499125 AOC3Q16853 763 aa6.27□□□□□ -1.41
HMGN1P12-201ENST00000499125 DMRTB1Q96MA1 342 aa6.27□□□□□ -1.41
HMGN1P12-201ENST00000499125 DUSP23Q9BVJ7 150 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms