RNA–Protein interactions for RNA: ENST00000498801.5

GARNL3-222, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-222ENST00000498801 BRD2P25440 801 aaKnown RBP9.72□□□□□ -0.85
GARNL3-222ENST00000498801 PRKAR2BP31323 418 aa9.72□□□□□ -0.85
GARNL3-222ENST00000498801 POU4F2Q12837 409 aa9.72□□□□□ -0.85
GARNL3-222ENST00000498801 C11orf91Q3C1V1 193 aa9.72□□□□□ -0.85
GARNL3-222ENST00000498801 AKAP4Q5JQC9 854 aa9.72□□□□□ -0.85
GARNL3-222ENST00000498801 LYSMD3Q7Z3D4 306 aa9.72□□□□□ -0.85
GARNL3-222ENST00000498801 FAM9BQ8IZU0 186 aa9.72□□□□□ -0.85
GARNL3-222ENST00000498801 DDX54Q8TDD1 881 aaKnown RBP9.72□□□□□ -0.85
GARNL3-222ENST00000498801 PLEKHF1Q96S99 279 aa9.72□□□□□ -0.85
GARNL3-222ENST00000498801 KLK14Q9P0G3 267 aa9.72□□□□□ -0.85
GARNL3-222ENST00000498801 MAP3K5Q99683 1374 aa9.72□□□□□ -0.85
GARNL3-222ENST00000498801 ANKRD33BA6NCL7 494 aa9.71□□□□□ -0.86
GARNL3-222ENST00000498801 ERVV-2B6SEH9 535 aa9.71□□□□□ -0.86
GARNL3-222ENST00000498801 ALKBH2Q6NS38 261 aa9.71□□□□□ -0.86
GARNL3-222ENST00000498801 ZNF530Q6P9A1 599 aaPredicted RBP9.71□□□□□ -0.86
GARNL3-222ENST00000498801 ETFBKMTQ8IXQ9 262 aa9.71□□□□□ -0.86
GARNL3-222ENST00000498801 RHPN1Q8TCX5 695 aa9.71□□□□□ -0.86
GARNL3-222ENST00000498801 AIDAQ96BJ3 306 aa9.71□□□□□ -0.86
GARNL3-222ENST00000498801 PNNQ9H307 717 aaKnown RBP9.71□□□□□ -0.86
GARNL3-222ENST00000498801 ZNF831Q5JPB2 1677 aa9.71□□□□□ -0.86
GARNL3-222ENST00000498801 ZBTB39O15060 712 aa9.7□□□□□ -0.86
GARNL3-222ENST00000498801 KCNQ2O43526 872 aa9.7□□□□□ -0.86
GARNL3-222ENST00000498801 WDR44Q5JSH3 913 aa9.7□□□□□ -0.86
GARNL3-222ENST00000498801 PTF1AQ7RTS3 328 aa9.7□□□□□ -0.86
GARNL3-222ENST00000498801 NPAS4Q8IUM7 802 aa9.7□□□□□ -0.86
GARNL3-222ENST00000498801 CRIPAKQ8N1N5 446 aa9.7□□□□□ -0.86
GARNL3-222ENST00000498801 ZNF428Q96B54 188 aa9.7□□□□□ -0.86
GARNL3-222ENST00000498801 ASB16Q96NS5 453 aa9.7□□□□□ -0.86
GARNL3-222ENST00000498801 NUP188Q5SRE5 1749 aa9.7□□□□□ -0.86
GARNL3-222ENST00000498801 BTAF1O14981 1849 aa9.69□□□□□ -0.86
GARNL3-222ENST00000498801 AXIN1O15169 862 aa9.69□□□□□ -0.86
GARNL3-222ENST00000498801 NDUFB5O43674 189 aa9.69□□□□□ -0.86
GARNL3-222ENST00000498801 HTATSF1O43719 755 aaKnown RBP9.69□□□□□ -0.86
GARNL3-222ENST00000498801 FZD6O60353 706 aa9.69□□□□□ -0.86
GARNL3-222ENST00000498801 APBA3O96018 575 aa9.69□□□□□ -0.86
GARNL3-222ENST00000498801 NEFMP07197 916 aa9.69□□□□□ -0.86
GARNL3-222ENST00000498801 RHOQP17081 205 aa9.69□□□□□ -0.86
GARNL3-222ENST00000498801 ATP4AP20648 1035 aa9.69□□□□□ -0.86
GARNL3-222ENST00000498801 MTHFSDQ2M296 383 aaKnown RBP9.69□□□□□ -0.86
GARNL3-222ENST00000498801 C1orf141Q5JVX7 400 aa9.69□□□□□ -0.86
GARNL3-222ENST00000498801 DEFB132Q7Z7B7 95 aa9.69□□□□□ -0.86
GARNL3-222ENST00000498801 CCDC146Q8IYE0 955 aa9.69□□□□□ -0.86
GARNL3-222ENST00000498801 C7orf43Q8WVR3 580 aa9.69□□□□□ -0.86
GARNL3-222ENST00000498801 RUNDC1Q96C34 613 aa9.69□□□□□ -0.86
GARNL3-222ENST00000498801 IFT43Q96FT9 208 aa9.69□□□□□ -0.86
GARNL3-222ENST00000498801 PHACTR3Q96KR7 559 aa9.69□□□□□ -0.86
GARNL3-222ENST00000498801 ZFP42Q96MM3 310 aa9.69□□□□□ -0.86
GARNL3-222ENST00000498801 RBCK1Q9BYM8 510 aa9.69□□□□□ -0.86
GARNL3-222ENST00000498801 MAPK8IP3Q9UPT6 1336 aa9.69□□□□□ -0.86
GARNL3-222ENST00000498801 LY75O60449 1722 aa9.68□□□□□ -0.86
GARNL3-222ENST00000498801 PALLDQ8WX93 1383 aa9.68□□□□□ -0.86
GARNL3-222ENST00000498801 HMGB2P26583 209 aaKnown RBP9.68□□□□□ -0.86
GARNL3-222ENST00000498801 ATCAYQ86WG3 371 aa9.68□□□□□ -0.86
GARNL3-222ENST00000498801 ZSCAN29Q8IWY8 852 aaPredicted RBP9.68□□□□□ -0.86
GARNL3-222ENST00000498801 CCDC87Q9NVE4 849 aa9.68□□□□□ -0.86
GARNL3-222ENST00000498801 BRPF3Q9ULD4 1205 aa9.68□□□□□ -0.86
GARNL3-222ENST00000498801 FIGNL2A6NMB9 653 aa9.67□□□□□ -0.86
GARNL3-222ENST00000498801 RBM25P49756 843 aaKnown RBP9.67□□□□□ -0.86
GARNL3-222ENST00000498801 AAMPQ13685 434 aa9.67□□□□□ -0.86
GARNL3-222ENST00000498801 RGL4Q8IZJ4 473 aa9.67□□□□□ -0.86
GARNL3-222ENST00000498801 PIGBQ92521 554 aa9.67□□□□□ -0.86
GARNL3-222ENST00000498801 SMARCC1Q92922 1105 aaPredicted RBP9.67□□□□□ -0.86
GARNL3-222ENST00000498801 KLRG1Q96E93 195 aa9.67□□□□□ -0.86
GARNL3-222ENST00000498801 ACSBG1Q96GR2 724 aa9.67□□□□□ -0.86
GARNL3-222ENST00000498801 TIMMDC1Q9NPL8 285 aa9.67□□□□□ -0.86
GARNL3-222ENST00000498801 BCS1LQ9Y276 419 aa9.67□□□□□ -0.86
GARNL3-222ENST00000498801 GPC6Q9Y625 555 aaPredicted RBP9.67□□□□□ -0.86
GARNL3-222ENST00000498801 KCPQ6ZWJ8 1503 aa9.66□□□□□ -0.86
GARNL3-222ENST00000498801 A0A1B0GTH6 734 aa9.66□□□□□ -0.86
GARNL3-222ENST00000498801 GNAT3A8MTJ3 354 aa9.66□□□□□ -0.86
GARNL3-222ENST00000498801 EZH2Q15910 746 aaKnown RBP9.66□□□□□ -0.86
GARNL3-222ENST00000498801 HIF1AQ16665 826 aa9.66□□□□□ -0.86
GARNL3-222ENST00000498801 TXNRD1Q16881 649 aa9.66□□□□□ -0.86
GARNL3-222ENST00000498801 TMC7Q7Z402 723 aa9.66□□□□□ -0.86
GARNL3-222ENST00000498801 SLC52A2Q9HAB3 445 aa9.66□□□□□ -0.86
GARNL3-222ENST00000498801 TMOD3Q9NYL9 352 aa9.66□□□□□ -0.86
GARNL3-222ENST00000498801 DNMT3LQ9UJW3 386 aa9.66□□□□□ -0.86
GARNL3-222ENST00000498801 C5P01031 1676 aa9.66□□□□□ -0.86
GARNL3-222ENST00000498801 SCN11AQ9UI33 1791 aa9.65□□□□□ -0.86
GARNL3-222ENST00000498801 TGFBR3LH3BV60 316 aa9.65□□□□□ -0.86
GARNL3-222ENST00000498801 APAF1O14727 1248 aa9.65□□□□□ -0.86
GARNL3-222ENST00000498801 RNMTO43148 476 aaKnown RBP9.65□□□□□ -0.86
GARNL3-222ENST00000498801 ZAP70P43403 619 aa9.65□□□□□ -0.86
GARNL3-222ENST00000498801 NFE2L2Q16236 605 aa9.65□□□□□ -0.86
GARNL3-222ENST00000498801 TREML1Q86YW5 311 aa9.65□□□□□ -0.86
GARNL3-222ENST00000498801 HSH2DQ96JZ2 352 aa9.65□□□□□ -0.86
GARNL3-222ENST00000498801 SUSD3Q96L08 255 aa9.65□□□□□ -0.86
GARNL3-222ENST00000498801 RBM47A0AV96 593 aaKnown RBP9.64□□□□□ -0.87
GARNL3-222ENST00000498801 ST8SIA5O15466 376 aa9.64□□□□□ -0.87
GARNL3-222ENST00000498801 TMPOP42166 694 aaKnown RBP9.64□□□□□ -0.87
GARNL3-222ENST00000498801 IER5Q5VY09 327 aa9.64□□□□□ -0.87
GARNL3-222ENST00000498801 MPRIPQ6WCQ1 1025 aa9.64□□□□□ -0.87
GARNL3-222ENST00000498801 BICDL1Q6ZP65 573 aa9.64□□□□□ -0.87
GARNL3-222ENST00000498801 LRRC4BQ9NT99 713 aa9.64□□□□□ -0.87
GARNL3-222ENST00000498801 RRP7AQ9Y3A4 280 aaKnown RBP9.64□□□□□ -0.87
GARNL3-222ENST00000498801 SIPA1L3O60292 1781 aaPredicted RBP9.64□□□□□ -0.87
GARNL3-222ENST00000498801 UBR2Q8IWV8 1755 aa9.63□□□□□ -0.87
GARNL3-222ENST00000498801 DLG5Q8TDM6 1919 aa9.63□□□□□ -0.87
GARNL3-222ENST00000498801 MSX1P28360 303 aa9.63□□□□□ -0.87
GARNL3-222ENST00000498801 RIPK4P57078 832 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 118.8 ms