RNA–Protein interactions for RNA: ENST00000497556.5

ATP13A1-214, Transcript of ATPase 13A1, humanhuman

TSL 2

Gene ATP13A1, Length 2,442 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A1-214ENST00000497556 XPO4Q9C0E2 1151 aaKnown RBP16.04■□□□□ 0.16
ATP13A1-214ENST00000497556 CWC25Q9NXE8 425 aaPredicted RBP16.04■□□□□ 0.16
ATP13A1-214ENST00000497556 ZBTB1Q9Y2K1 713 aa16.04■□□□□ 0.16
ATP13A1-214ENST00000497556 COL15A1P39059 1388 aa16.04■□□□□ 0.16
ATP13A1-214ENST00000497556 MAP2K7O14733 419 aa16.03■□□□□ 0.16
ATP13A1-214ENST00000497556 RSRC2Q7L4I2 434 aaKnown RBP16.03■□□□□ 0.16
ATP13A1-214ENST00000497556 RUFY2Q8WXA3 655 aa16.03■□□□□ 0.16
ATP13A1-214ENST00000497556 PARD6BQ9BYG5 372 aa16.03■□□□□ 0.16
ATP13A1-214ENST00000497556 ANKRD36CQ5JPF3 1778 aa16.03■□□□□ 0.16
ATP13A1-214ENST00000497556 CICQ96RK0 1608 aaPredicted RBP16.03■□□□□ 0.16
ATP13A1-214ENST00000497556 KCNQ2O43526 872 aa16.03■□□□□ 0.16
ATP13A1-214ENST00000497556 PPFIA3O75145 1194 aa16.03■□□□□ 0.16
ATP13A1-214ENST00000497556 CORO7P57737 925 aa16.03■□□□□ 0.16
ATP13A1-214ENST00000497556 RESTQ13127 1097 aa16.03■□□□□ 0.16
ATP13A1-214ENST00000497556 FTOQ9C0B1 505 aaKnown RBP eCLIP16.03■□□□□ 0.16
ATP13A1-214ENST00000497556 LONRF2Q1L5Z9 754 aa16.02■□□□□ 0.16
ATP13A1-214ENST00000497556 SWT1Q5T5J6 900 aaKnown RBP16.02■□□□□ 0.16
ATP13A1-214ENST00000497556 NAT10Q9H0A0 1025 aaKnown RBP16.02■□□□□ 0.16
ATP13A1-214ENST00000497556 GOLPH3LQ9H4A5 285 aa16.02■□□□□ 0.16
ATP13A1-214ENST00000497556 ZSCAN16Q9H4T2 348 aaPredicted RBP16.02■□□□□ 0.16
ATP13A1-214ENST00000497556 NUP98P52948 1817 aa16.02■□□□□ 0.15
ATP13A1-214ENST00000497556 PALLDQ8WX93 1383 aa16.02■□□□□ 0.15
ATP13A1-214ENST00000497556 H7C1W4 665 aa16.02■□□□□ 0.15
ATP13A1-214ENST00000497556 CEBPZQ03701 1054 aaKnown RBP16.02■□□□□ 0.15
ATP13A1-214ENST00000497556 EVI5LQ96CN4 794 aa16.02■□□□□ 0.15
ATP13A1-214ENST00000497556 MYH14Q7Z406 1995 aaKnown RBP16.01■□□□□ 0.15
ATP13A1-214ENST00000497556 MYH15Q9Y2K3 1946 aa16.01■□□□□ 0.15
ATP13A1-214ENST00000497556 CPP00450 1065 aa16.01■□□□□ 0.15
ATP13A1-214ENST00000497556 CCDC172P0C7W6 258 aa16.01■□□□□ 0.15
ATP13A1-214ENST00000497556 ZKSCAN1P17029 563 aaPredicted RBP16.01■□□□□ 0.15
ATP13A1-214ENST00000497556 RABGGTAQ92696 567 aa16.01■□□□□ 0.15
ATP13A1-214ENST00000497556 ZNF622Q969S3 477 aaKnown RBP eCLIP16.01■□□□□ 0.152e-6■■□□□ 11.7
ATP13A1-214ENST00000497556 LRRC2Q9BYS8 371 aa16.01■□□□□ 0.15
ATP13A1-214ENST00000497556 IFNKQ9P0W0 207 aa16.01■□□□□ 0.15
ATP13A1-214ENST00000497556 VPS18Q9P253 973 aa16.01■□□□□ 0.15
ATP13A1-214ENST00000497556 CEP83Q9Y592 693 aa16.01■□□□□ 0.15
ATP13A1-214ENST00000497556 MAP3K15Q6ZN16 1313 aa16.01■□□□□ 0.15
ATP13A1-214ENST00000497556 LOC102724428A0A0B4J2F2 783 aa16■□□□□ 0.15
ATP13A1-214ENST00000497556 CCDC151A5D8V7 595 aa16■□□□□ 0.15
ATP13A1-214ENST00000497556 SIK1P57059 783 aa16■□□□□ 0.15
ATP13A1-214ENST00000497556 TCIRG1Q13488 830 aa16■□□□□ 0.15
ATP13A1-214ENST00000497556 GNL2Q13823 731 aaKnown RBP16■□□□□ 0.15
ATP13A1-214ENST00000497556 RABL6Q3YEC7 729 aaPredicted RBP16■□□□□ 0.15
ATP13A1-214ENST00000497556 CCAR1Q8IX12 1150 aaKnown RBP16■□□□□ 0.15
ATP13A1-214ENST00000497556 ISCA1Q9BUE6 129 aa16■□□□□ 0.15
ATP13A1-214ENST00000497556 CFAP45Q9UL16 551 aa16■□□□□ 0.15
ATP13A1-214ENST00000497556 AFF2P51816 1311 aa16■□□□□ 0.15
ATP13A1-214ENST00000497556 RREB1Q92766 1687 aa16■□□□□ 0.15
ATP13A1-214ENST00000497556 RPS6KB1P23443 525 aa16■□□□□ 0.15
ATP13A1-214ENST00000497556 ATP6V1AP38606 617 aa16■□□□□ 0.15
ATP13A1-214ENST00000497556 GSCP56915 257 aaPredicted RBP16■□□□□ 0.15
ATP13A1-214ENST00000497556 BLOC1S2Q6QNY1 142 aa16■□□□□ 0.15
ATP13A1-214ENST00000497556 CCDC129Q6ZRS4 1044 aa16■□□□□ 0.15
ATP13A1-214ENST00000497556 CCDC91Q7Z6B0 441 aa16■□□□□ 0.15
ATP13A1-214ENST00000497556 ERC1Q8IUD2 1116 aa16■□□□□ 0.15
ATP13A1-214ENST00000497556 MKRN1Q9UHC7 482 aaKnown RBP16■□□□□ 0.15
ATP13A1-214ENST00000497556 COL5A3P25940 1745 aaPredicted RBP16■□□□□ 0.15
ATP13A1-214ENST00000497556 KINO60870 393 aaKnown RBP15.99■□□□□ 0.15
ATP13A1-214ENST00000497556 MAP3K9P80192 1104 aa15.99■□□□□ 0.15
ATP13A1-214ENST00000497556 PPP2R3AQ06190 1150 aa15.99■□□□□ 0.15
ATP13A1-214ENST00000497556 APOBRQ0VD83 1088 aa15.99■□□□□ 0.15
ATP13A1-214ENST00000497556 E2F4Q16254 413 aa15.99■□□□□ 0.15
ATP13A1-214ENST00000497556 JAKMIP3Q5VZ66 844 aa15.99■□□□□ 0.15
ATP13A1-214ENST00000497556 MCTP2Q6DN12 878 aa15.99■□□□□ 0.15
ATP13A1-214ENST00000497556 ERCC4Q92889 916 aaPredicted RBP15.99■□□□□ 0.15
ATP13A1-214ENST00000497556 MPHOSPH8Q99549 860 aa15.99■□□□□ 0.15
ATP13A1-214ENST00000497556 FSD1Q9BTV5 496 aa15.99■□□□□ 0.15
ATP13A1-214ENST00000497556 MRFAP1Q9Y605 127 aa15.99■□□□□ 0.15
ATP13A1-214ENST00000497556 ENGASEQ8NFI3 743 aa15.99■□□□□ 0.15
ATP13A1-214ENST00000497556 PDE11AQ9HCR9 933 aa15.99■□□□□ 0.15
ATP13A1-214ENST00000497556 IL6STP40189 918 aaPredicted RBP15.98■□□□□ 0.15
ATP13A1-214ENST00000497556 G3BP1Q13283 466 aaKnown RBP eCLIP15.98■□□□□ 0.15
ATP13A1-214ENST00000497556 ITPK1Q13572 414 aa15.98■□□□□ 0.15
ATP13A1-214ENST00000497556 CCDC73Q6ZRK6 1079 aa15.98■□□□□ 0.15
ATP13A1-214ENST00000497556 MMS22LQ6ZRQ5 1243 aa15.98■□□□□ 0.15
ATP13A1-214ENST00000497556 BRF1Q92994 677 aa15.98■□□□□ 0.15
ATP13A1-214ENST00000497556 SEC62Q99442 399 aaKnown RBP15.98■□□□□ 0.15
ATP13A1-214ENST00000497556 BTAF1O14981 1849 aa15.98■□□□□ 0.15
ATP13A1-214ENST00000497556 RFX5P48382 616 aaPredicted RBP15.98■□□□□ 0.15
ATP13A1-214ENST00000497556 FOXO4P98177 505 aa15.98■□□□□ 0.15
ATP13A1-214ENST00000497556 FAM160A1Q05DH4 1040 aa15.98■□□□□ 0.15
ATP13A1-214ENST00000497556 BRD3Q15059 726 aa15.98■□□□□ 0.15
ATP13A1-214ENST00000497556 ANKRD1Q15327 319 aa15.98■□□□□ 0.15
ATP13A1-214ENST00000497556 HLFQ16534 295 aa15.98■□□□□ 0.15
ATP13A1-214ENST00000497556 GIGYF2Q6Y7W6 1299 aaKnown RBP15.98■□□□□ 0.15
ATP13A1-214ENST00000497556 CXorf56Q9H5V9 222 aa15.98■□□□□ 0.15
ATP13A1-214ENST00000497556 VWA3AA6NCI4 1184 aa15.97■□□□□ 0.15
ATP13A1-214ENST00000497556 LMBR1LQ6UX01 489 aa15.97■□□□□ 0.15
ATP13A1-214ENST00000497556 BANK1Q8NDB2 785 aa15.97■□□□□ 0.15
ATP13A1-214ENST00000497556 SMARCC1Q92922 1105 aaPredicted RBP15.97■□□□□ 0.15
ATP13A1-214ENST00000497556 FBXW7Q969H0 707 aa15.97■□□□□ 0.15
ATP13A1-214ENST00000497556 GJD4Q96KN9 370 aaPredicted RBP15.97■□□□□ 0.15
ATP13A1-214ENST00000497556 BPIFA3Q9BQP9 254 aa15.97■□□□□ 0.15
ATP13A1-214ENST00000497556 CCDC87Q9NVE4 849 aa15.97■□□□□ 0.15
ATP13A1-214ENST00000497556 NHSQ6T4R5 1651 aa15.97■□□□□ 0.15
ATP13A1-214ENST00000497556 MED23Q9ULK4 1368 aa15.97■□□□□ 0.15
ATP13A1-214ENST00000497556 ZNF831Q5JPB2 1677 aa15.97■□□□□ 0.15
ATP13A1-214ENST00000497556 PSMA5P28066 241 aa15.97■□□□□ 0.15
ATP13A1-214ENST00000497556 ADD1P35611 737 aaKnown RBP15.97■□□□□ 0.15
ATP13A1-214ENST00000497556 TXLNAP40222 546 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms