RNA–Protein interactions for RNA: ENST00000496323.1

SPTBN1-205, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 2,225 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-205ENST00000496323 OLFM4Q6UX06 510 aa16.13■□□□□ 0.17
SPTBN1-205ENST00000496323 FOXD4L3Q6VB84 417 aaPredicted RBP16.13■□□□□ 0.17
SPTBN1-205ENST00000496323 SMARCC2Q8TAQ2 1214 aa16.13■□□□□ 0.17
SPTBN1-205ENST00000496323 ANKRD31Q8N7Z5 1873 aa16.13■□□□□ 0.17
SPTBN1-205ENST00000496323 SMIM22K7EJ46 135 aa16.13■□□□□ 0.17
SPTBN1-205ENST00000496323 PRPF40AO75400 957 aaKnown RBP16.13■□□□□ 0.17
SPTBN1-205ENST00000496323 F13A1P00488 732 aa16.13■□□□□ 0.17
SPTBN1-205ENST00000496323 AKNAD1Q5T1N1 836 aa16.13■□□□□ 0.17
SPTBN1-205ENST00000496323 NSUN7Q8NE18 718 aaKnown RBP16.13■□□□□ 0.17
SPTBN1-205ENST00000496323 LLPHQ9BRT6 129 aaKnown RBP16.13■□□□□ 0.17
SPTBN1-205ENST00000496323 SKOR2Q2VWA4 1001 aaPredicted RBP16.12■□□□□ 0.17
SPTBN1-205ENST00000496323 SPTY2D1Q68D10 685 aaPredicted RBP16.12■□□□□ 0.17
SPTBN1-205ENST00000496323 STAG1Q8WVM7 1258 aa16.12■□□□□ 0.17
SPTBN1-205ENST00000496323 GZF1Q9H116 711 aaPredicted RBP16.12■□□□□ 0.17
SPTBN1-205ENST00000496323 STK32BQ9NY57 414 aa16.12■□□□□ 0.17
SPTBN1-205ENST00000496323 AATFQ9NY61 560 aaKnown RBP eCLIP16.12■□□□□ 0.17
SPTBN1-205ENST00000496323 HPS5Q9UPZ3 1129 aa16.12■□□□□ 0.17
SPTBN1-205ENST00000496323 PPARAQ07869 468 aa16.11■□□□□ 0.17
SPTBN1-205ENST00000496323 TMED8Q6PL24 325 aaPredicted RBP16.11■□□□□ 0.17
SPTBN1-205ENST00000496323 ZSWIM5Q9P217 1185 aa16.11■□□□□ 0.17
SPTBN1-205ENST00000496323 NAP1L2Q9ULW6 460 aaPredicted RBP16.11■□□□□ 0.17
SPTBN1-205ENST00000496323 KLF18A0A0U1RQI7 1052 aa16.11■□□□□ 0.17
SPTBN1-205ENST00000496323 C6orf229H3BNL8 230 aa16.11■□□□□ 0.17
SPTBN1-205ENST00000496323 SH2B2O14492 632 aaPredicted RBP16.11■□□□□ 0.17
SPTBN1-205ENST00000496323 PDCP20941 246 aa16.11■□□□□ 0.17
SPTBN1-205ENST00000496323 CDC37L1Q7L3B6 337 aa16.11■□□□□ 0.17
SPTBN1-205ENST00000496323 DZIP1Q86YF9 867 aaKnown RBP16.11■□□□□ 0.17
SPTBN1-205ENST00000496323 IGDCC4Q8TDY8 1250 aa16.11■□□□□ 0.17
SPTBN1-205ENST00000496323 DDX11Q96FC9 970 aa16.11■□□□□ 0.17
SPTBN1-205ENST00000496323 MASTLQ96GX5 879 aa16.11■□□□□ 0.17
SPTBN1-205ENST00000496323 SENP2Q9HC62 589 aa16.11■□□□□ 0.17
SPTBN1-205ENST00000496323 ANAPC4Q9UJX5 808 aa16.11■□□□□ 0.17
SPTBN1-205ENST00000496323 ANGEL1Q9UNK9 670 aaKnown RBP16.11■□□□□ 0.17
SPTBN1-205ENST00000496323 VPS37CA5D8V6 355 aaPredicted RBP16.1■□□□□ 0.17
SPTBN1-205ENST00000496323 LDHBP07195 334 aaKnown RBP16.1■□□□□ 0.17
SPTBN1-205ENST00000496323 ALDH1B1P30837 517 aa16.1■□□□□ 0.17
SPTBN1-205ENST00000496323 MFSD6Q6ZSS7 791 aa16.1■□□□□ 0.17
SPTBN1-205ENST00000496323 DEFB132Q7Z7B7 95 aa16.1■□□□□ 0.17
SPTBN1-205ENST00000496323 PDGFDQ9GZP0 370 aaPredicted RBP16.1■□□□□ 0.17
SPTBN1-205ENST00000496323 KDM4AO75164 1064 aa16.1■□□□□ 0.17
SPTBN1-205ENST00000496323 GIMAP6Q6P9H5 292 aa16.1■□□□□ 0.17
SPTBN1-205ENST00000496323 LTBP1Q14766 1721 aa16.09■□□□□ 0.17
SPTBN1-205ENST00000496323 CYP2D7A0A087X1C5 515 aa16.09■□□□□ 0.17
SPTBN1-205ENST00000496323 PTPDC1A2A3K4 754 aa16.09■□□□□ 0.17
SPTBN1-205ENST00000496323 GOLGA8BA8MQT2 603 aa16.09■□□□□ 0.17
SPTBN1-205ENST00000496323 MINDY4BA8MYZ0 360 aa16.09■□□□□ 0.17
SPTBN1-205ENST00000496323 IGSF3O75054 1194 aa16.09■□□□□ 0.17
SPTBN1-205ENST00000496323 PDIA4P13667 645 aaKnown RBP16.09■□□□□ 0.17
SPTBN1-205ENST00000496323 KLHL40Q2TBA0 621 aa16.09■□□□□ 0.17
SPTBN1-205ENST00000496323 STK11IPQ8N1F8 1099 aa16.09■□□□□ 0.17
SPTBN1-205ENST00000496323 CNNM2Q9H8M5 875 aa16.09■□□□□ 0.17
SPTBN1-205ENST00000496323 LRRC37AA6NMS7 1700 aa16.09■□□□□ 0.17
SPTBN1-205ENST00000496323 TIAM2Q8IVF5 1701 aa16.09■□□□□ 0.17
SPTBN1-205ENST00000496323 DIXDC1Q155Q3 683 aa16.09■□□□□ 0.17
SPTBN1-205ENST00000496323 CTR9Q6PD62 1173 aa16.09■□□□□ 0.17
SPTBN1-205ENST00000496323 RAB11FIP4Q86YS3 637 aa16.09■□□□□ 0.17
SPTBN1-205ENST00000496323 C2CD5Q86YS7 1000 aa16.09■□□□□ 0.17
SPTBN1-205ENST00000496323 TMEM87BQ96K49 555 aa16.09■□□□□ 0.17
SPTBN1-205ENST00000496323 KRT23Q9C075 422 aa16.09■□□□□ 0.17
SPTBN1-205ENST00000496323 LY9Q9HBG7 655 aa16.09■□□□□ 0.17
SPTBN1-205ENST00000496323 GDPD2Q9HCC8 539 aa16.09■□□□□ 0.17
SPTBN1-205ENST00000496323 DCP1AQ9NPI6 582 aaPredicted RBP16.09■□□□□ 0.17
SPTBN1-205ENST00000496323 DDX49Q9Y6V7 483 aaKnown RBP16.09■□□□□ 0.17
SPTBN1-205ENST00000496323 PPFIA3O75145 1194 aa16.08■□□□□ 0.16
SPTBN1-205ENST00000496323 GPT2Q8TD30 523 aa16.08■□□□□ 0.16
SPTBN1-205ENST00000496323 RIMBP2O15034 1052 aa16.07■□□□□ 0.16
SPTBN1-205ENST00000496323 EVX2Q03828 476 aa16.07■□□□□ 0.16
SPTBN1-205ENST00000496323 RRP12Q5JTH9 1297 aaKnown RBP16.07■□□□□ 0.16
SPTBN1-205ENST00000496323 MPNDQ8N594 471 aa16.07■□□□□ 0.16
SPTBN1-205ENST00000496323 ZNF622Q969S3 477 aaKnown RBP eCLIP16.07■□□□□ 0.162e-7■□□□□ 9.4
SPTBN1-205ENST00000496323 CRNKL1Q9BZJ0 848 aaKnown RBP16.07■□□□□ 0.16
SPTBN1-205ENST00000496323 DUOX1Q9NRD9 1551 aa16.07■□□□□ 0.16
SPTBN1-205ENST00000496323 COL11A2P13942 1736 aaPredicted RBP16.07■□□□□ 0.16
SPTBN1-205ENST00000496323 USP17L12C9JPN9 530 aa16.07■□□□□ 0.16
SPTBN1-205ENST00000496323 USP17L21D6R901 530 aa16.07■□□□□ 0.16
SPTBN1-205ENST00000496323 FDPSP14324 419 aaKnown RBP16.07■□□□□ 0.16
SPTBN1-205ENST00000496323 HMGN5P82970 282 aaKnown RBP16.07■□□□□ 0.16
SPTBN1-205ENST00000496323 TMEM67Q5HYA8 995 aa16.07■□□□□ 0.16
SPTBN1-205ENST00000496323 SGMS1Q86VZ5 419 aa16.07■□□□□ 0.16
SPTBN1-205ENST00000496323 RNF41Q9H4P4 317 aaPredicted RBP16.07■□□□□ 0.16
SPTBN1-205ENST00000496323 ATP8A2Q9NTI2 1148 aa16.07■□□□□ 0.16
SPTBN1-205ENST00000496323 CNPY2Q9Y2B0 182 aa16.07■□□□□ 0.16
SPTBN1-205ENST00000496323 BAG6P46379 1132 aa16.06■□□□□ 0.16
SPTBN1-205ENST00000496323 DPP8Q6V1X1 898 aaPredicted RBP16.06■□□□□ 0.16
SPTBN1-205ENST00000496323 FERMT3Q86UX7 667 aa16.06■□□□□ 0.16
SPTBN1-205ENST00000496323 MKRN1Q9UHC7 482 aaKnown RBP16.06■□□□□ 0.16
SPTBN1-205ENST00000496323 ATP6V1DQ9Y5K8 247 aa16.06■□□□□ 0.16
SPTBN1-205ENST00000496323 FAM205AQ6ZU69 1335 aa16.06■□□□□ 0.16
SPTBN1-205ENST00000496323 H0YIN7 160 aa16.06■□□□□ 0.16
SPTBN1-205ENST00000496323 IFIT3O14879 490 aaKnown RBP16.06■□□□□ 0.16
SPTBN1-205ENST00000496323 FGRP09769 529 aa16.06■□□□□ 0.16
SPTBN1-205ENST00000496323 CHRNA5P30532 468 aa16.06■□□□□ 0.16
SPTBN1-205ENST00000496323 LIFRP42702 1097 aa16.06■□□□□ 0.16
SPTBN1-205ENST00000496323 GSTO1P78417 241 aa16.06■□□□□ 0.16
SPTBN1-205ENST00000496323 DNM1Q05193 864 aaKnown RBP16.06■□□□□ 0.16
SPTBN1-205ENST00000496323 MFSD14BQ5SR56 506 aa16.06■□□□□ 0.16
SPTBN1-205ENST00000496323 STYK1Q6J9G0 422 aa16.06■□□□□ 0.16
SPTBN1-205ENST00000496323 APOA5Q6Q788 366 aa16.06■□□□□ 0.16
SPTBN1-205ENST00000496323 USP48Q86UV5 1035 aa16.06■□□□□ 0.16
SPTBN1-205ENST00000496323 FAM184AQ8NB25 1140 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms