RNA–Protein interactions for RNA: ENST00000495522.1

CALD1-222, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 2,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-222ENST00000495522 PLA2G4DQ86XP0 818 aa17.86■□□□□ 0.45
CALD1-222ENST00000495522 IGDCC4Q8TDY8 1250 aa17.86■□□□□ 0.45
CALD1-222ENST00000495522 TRIM5Q9C035 493 aa17.86■□□□□ 0.45
CALD1-222ENST00000495522 KCNF1Q9H3M0 494 aa17.86■□□□□ 0.45
CALD1-222ENST00000495522 MYH14Q7Z406 1995 aaKnown RBP17.85■□□□□ 0.45
CALD1-222ENST00000495522 SPATA31A5Q5VU36 1347 aa17.85■□□□□ 0.45
CALD1-222ENST00000495522 SPATA31A7Q8IWB4 1347 aa17.85■□□□□ 0.45
CALD1-222ENST00000495522 ZNF75DP51815 510 aa17.85■□□□□ 0.45
CALD1-222ENST00000495522 SYNE3Q6ZMZ3 975 aa17.85■□□□□ 0.45
CALD1-222ENST00000495522 SGMS1Q86VZ5 419 aa17.85■□□□□ 0.45
CALD1-222ENST00000495522 FMR1NBQ8N0W7 255 aaPredicted RBP17.85■□□□□ 0.45
CALD1-222ENST00000495522 SMARCC1Q92922 1105 aaPredicted RBP17.85■□□□□ 0.45
CALD1-222ENST00000495522 CNNM2Q9H8M5 875 aa17.85■□□□□ 0.45
CALD1-222ENST00000495522 ARMT1Q9H993 441 aa17.85■□□□□ 0.45
CALD1-222ENST00000495522 ZNF652Q9Y2D9 606 aa17.85■□□□□ 0.45
CALD1-222ENST00000495522 SPTLC2O15270 562 aa17.84■□□□□ 0.45
CALD1-222ENST00000495522 ZBTB43O43298 467 aa17.84■□□□□ 0.45
CALD1-222ENST00000495522 GNAT2P19087 354 aa17.84■□□□□ 0.45
CALD1-222ENST00000495522 BCAMP50895 628 aa17.84■□□□□ 0.45
CALD1-222ENST00000495522 IQCB1Q15051 598 aa17.84■□□□□ 0.45
CALD1-222ENST00000495522 TMEM67Q5HYA8 995 aa17.84■□□□□ 0.45
CALD1-222ENST00000495522 NFXL1Q6ZNB6 911 aa17.84■□□□□ 0.45
CALD1-222ENST00000495522 ALG1Q9BT22 464 aa17.84■□□□□ 0.45
CALD1-222ENST00000495522 LY9Q9HBG7 655 aa17.84■□□□□ 0.45
CALD1-222ENST00000495522 GJB4Q9NTQ9 266 aa17.84■□□□□ 0.45
CALD1-222ENST00000495522 TIAM2Q8IVF5 1701 aa17.84■□□□□ 0.45
CALD1-222ENST00000495522 KIF28PB7ZC32 967 aa17.84■□□□□ 0.45
CALD1-222ENST00000495522 GOLGA6L19H0YKK7 550 aa17.84■□□□□ 0.45
CALD1-222ENST00000495522 LIFRP42702 1097 aa17.84■□□□□ 0.45
CALD1-222ENST00000495522 DNTTIP2Q5QJE6 756 aaKnown RBP17.84■□□□□ 0.45
CALD1-222ENST00000495522 MICU3Q86XE3 530 aa17.84■□□□□ 0.45
CALD1-222ENST00000495522 ANO10Q9NW15 660 aa17.84■□□□□ 0.45
CALD1-222ENST00000495522 PNPLA7Q6ZV29 1317 aa17.84■□□□□ 0.45
CALD1-222ENST00000495522 CHD4Q14839 1912 aa17.83■□□□□ 0.45
CALD1-222ENST00000495522 GSG1L2A8MUP6 293 aa17.83■□□□□ 0.45
CALD1-222ENST00000495522 HSPA1LP34931 641 aa17.83■□□□□ 0.45
CALD1-222ENST00000495522 CHRNDQ07001 517 aa17.83■□□□□ 0.45
CALD1-222ENST00000495522 ANO1Q5XXA6 986 aa17.83■□□□□ 0.45
CALD1-222ENST00000495522 BARGINQ6ZT62 677 aa17.83■□□□□ 0.45
CALD1-222ENST00000495522 C11orf57Q6ZUT1 292 aaPredicted RBP17.83■□□□□ 0.45
CALD1-222ENST00000495522 KIAA1524Q8TCG1 905 aa17.83■□□□□ 0.45
CALD1-222ENST00000495522 NACAP1Q9BZK3 213 aa17.83■□□□□ 0.45
CALD1-222ENST00000495522 KRT23Q9C075 422 aa17.83■□□□□ 0.45
CALD1-222ENST00000495522 SENP2Q9HC62 589 aa17.83■□□□□ 0.45
CALD1-222ENST00000495522 GOLGA8AA7E2F4 631 aa17.83■□□□□ 0.44
CALD1-222ENST00000495522 CDC27P30260 824 aa17.83■□□□□ 0.44
CALD1-222ENST00000495522 CTDSPL2Q05D32 466 aa17.83■□□□□ 0.44
CALD1-222ENST00000495522 AKNAD1Q5T1N1 836 aa17.83■□□□□ 0.44
CALD1-222ENST00000495522 DRC7Q8IY82 874 aa17.83■□□□□ 0.44
CALD1-222ENST00000495522 CDC5LQ99459 802 aaKnown RBP17.83■□□□□ 0.44
CALD1-222ENST00000495522 UQCRHLA0A096LP55 91 aa17.82■□□□□ 0.44
CALD1-222ENST00000495522 A0A1B0GVL5 298 aa17.82■□□□□ 0.44
CALD1-222ENST00000495522 UQCRHP07919 91 aa17.82■□□□□ 0.44
CALD1-222ENST00000495522 RXRAP19793 462 aa17.82■□□□□ 0.44
CALD1-222ENST00000495522 NDUFA8P51970 172 aa17.82■□□□□ 0.44
CALD1-222ENST00000495522 C17orf53Q8N3J3 647 aaPredicted RBP17.82■□□□□ 0.44
CALD1-222ENST00000495522 BCORQ6W2J9 1755 aa17.82■□□□□ 0.44
CALD1-222ENST00000495522 IFIT3O14879 490 aaKnown RBP17.81■□□□□ 0.44
CALD1-222ENST00000495522 PTGS1P23219 599 aa17.81■□□□□ 0.44
CALD1-222ENST00000495522 SARM1Q6SZW1 724 aa17.81■□□□□ 0.44
CALD1-222ENST00000495522 CLEC4GQ6UXB4 293 aa17.81■□□□□ 0.44
CALD1-222ENST00000495522 MFSD6Q6ZSS7 791 aa17.81■□□□□ 0.44
CALD1-222ENST00000495522 LCORLQ8N3X6 602 aa17.81■□□□□ 0.44
CALD1-222ENST00000495522 SDF4Q9BRK5 362 aa17.81■□□□□ 0.44
CALD1-222ENST00000495522 INCENPQ9NQS7 918 aa17.81■□□□□ 0.44
CALD1-222ENST00000495522 ZSWIM5Q9P217 1185 aa17.81■□□□□ 0.44
CALD1-222ENST00000495522 PYCARDQ9ULZ3 195 aa17.81■□□□□ 0.44
CALD1-222ENST00000495522 SLC4A4Q9Y6R1 1079 aa17.81■□□□□ 0.44
CALD1-222ENST00000495522 BCL9LQ86UU0 1499 aa17.81■□□□□ 0.44
CALD1-222ENST00000495522 CDC25BP30305 580 aa17.81■□□□□ 0.44
CALD1-222ENST00000495522 IARSP41252 1262 aaKnown RBP17.81■□□□□ 0.44
CALD1-222ENST00000495522 TDO2P48775 406 aa17.81■□□□□ 0.44
CALD1-222ENST00000495522 NTRK3Q16288 839 aa17.81■□□□□ 0.44
CALD1-222ENST00000495522 KRT40Q6A162 431 aa17.81■□□□□ 0.44
CALD1-222ENST00000495522 STAG1Q8WVM7 1258 aa17.81■□□□□ 0.44
CALD1-222ENST00000495522 PHKBQ93100 1093 aa17.81■□□□□ 0.44
CALD1-222ENST00000495522 AIFM3Q96NN9 605 aa17.81■□□□□ 0.44
CALD1-222ENST00000495522 LRP2BPQ9P2M1 347 aa17.81■□□□□ 0.44
CALD1-222ENST00000495522 SLC12A7Q9Y666 1083 aa17.81■□□□□ 0.44
CALD1-222ENST00000495522 COL5A3P25940 1745 aaPredicted RBP17.81■□□□□ 0.44
CALD1-222ENST00000495522 CCDC69A6NI79 296 aa17.8■□□□□ 0.44
CALD1-222ENST00000495522 BECN2A8MW95 431 aa17.8■□□□□ 0.44
CALD1-222ENST00000495522 PRKAB2O43741 272 aa17.8■□□□□ 0.44
CALD1-222ENST00000495522 VPS37DQ86XT2 251 aa17.8■□□□□ 0.44
CALD1-222ENST00000495522 CCDC144CPQ8IYA2 1237 aa17.8■□□□□ 0.44
CALD1-222ENST00000495522 CEP57L1Q8IYX8 460 aa17.8■□□□□ 0.44
CALD1-222ENST00000495522 TRIM29Q14134 588 aa17.8■□□□□ 0.44
CALD1-222ENST00000495522 CCDC186Q7Z3E2 898 aa17.8■□□□□ 0.44
CALD1-222ENST00000495522 NAT10Q9H0A0 1025 aaKnown RBP17.8■□□□□ 0.44
CALD1-222ENST00000495522 FAM217BQ9NTX9 383 aaPredicted RBP17.8■□□□□ 0.44
CALD1-222ENST00000495522 TACC3Q9Y6A5 838 aa17.8■□□□□ 0.44
CALD1-222ENST00000495522 STK36Q9NRP7 1315 aa17.8■□□□□ 0.44
CALD1-222ENST00000495522 NID2Q14112 1375 aa17.8■□□□□ 0.44
CALD1-222ENST00000495522 CMA1P23946 247 aa17.79■□□□□ 0.44
CALD1-222ENST00000495522 GNL2Q13823 731 aaKnown RBP17.79■□□□□ 0.44
CALD1-222ENST00000495522 SART3Q15020 963 aaKnown RBP17.79■□□□□ 0.44
CALD1-222ENST00000495522 SLC39A14Q15043 492 aa17.79■□□□□ 0.44
CALD1-222ENST00000495522 CLIP2Q9UDT6 1046 aa17.79■□□□□ 0.44
CALD1-222ENST00000495522 ECM29Q5VYK3 1845 aa17.79■□□□□ 0.44
CALD1-222ENST00000495522 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms