RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 CPA4Q9UI42 421 aa17.87■□□□□ 0.45
VARS-228ENST00000495010 RPAP1Q9BWH6 1393 aaPredicted RBP17.87■□□□□ 0.45
VARS-228ENST00000495010 H0YGN5 161 aa17.86■□□□□ 0.45
VARS-228ENST00000495010 PDHXO00330 501 aa17.86■□□□□ 0.45
VARS-228ENST00000495010 PSMC4P43686 418 aa17.86■□□□□ 0.45
VARS-228ENST00000495010 C17orf99Q6UX52 265 aa17.86■□□□□ 0.45
VARS-228ENST00000495010 ANKRD23Q86SG2 305 aa17.86■□□□□ 0.45
VARS-228ENST00000495010 ANKRD44Q8N8A2 993 aa17.86■□□□□ 0.45
VARS-228ENST00000495010 VGLL2Q8N8G2 317 aa17.86■□□□□ 0.45
VARS-228ENST00000495010 KLHDC4Q8TBB5 520 aa17.86■□□□□ 0.45
VARS-228ENST00000495010 WDR66Q8TBY9 1149 aa17.86■□□□□ 0.45
VARS-228ENST00000495010 FAM151AQ8WW52 585 aa17.86■□□□□ 0.45
VARS-228ENST00000495010 DPF3Q92784 378 aa17.86■□□□□ 0.45
VARS-228ENST00000495010 HTTP42858 3142 aa17.85■□□□□ 0.45
VARS-228ENST00000495010 SLC5A1P13866 664 aa17.85■□□□□ 0.45
VARS-228ENST00000495010 INPP5BP32019 993 aa17.85■□□□□ 0.45
VARS-228ENST00000495010 NKX2-3Q8TAU0 364 aa17.85■□□□□ 0.45
VARS-228ENST00000495010 KIF16BQ96L93 1317 aa17.85■□□□□ 0.45
VARS-228ENST00000495010 BIN2Q9UBW5 565 aaPredicted RBP17.85■□□□□ 0.45
VARS-228ENST00000495010 SRRDQ9UH36 339 aa17.85■□□□□ 0.45
VARS-228ENST00000495010 TCP10Q12799 353 aa17.84■□□□□ 0.45
VARS-228ENST00000495010 TRIM47Q96LD4 638 aa17.84■□□□□ 0.45
VARS-228ENST00000495010 MYPNQ86TC9 1320 aa17.83■□□□□ 0.44
VARS-228ENST00000495010 OSBPP22059 807 aa17.83■□□□□ 0.44
VARS-228ENST00000495010 GRK4P32298 578 aa17.83■□□□□ 0.44
VARS-228ENST00000495010 MTFR1Q15390 333 aa17.83■□□□□ 0.44
VARS-228ENST00000495010 FAM9BQ8IZU0 186 aa17.83■□□□□ 0.44
VARS-228ENST00000495010 LPIN2Q92539 896 aa17.83■□□□□ 0.44
VARS-228ENST00000495010 ZSWIM8A7E2V4 1837 aa17.83■□□□□ 0.44
VARS-228ENST00000495010 PTPRCP08575 1304 aa17.82■□□□□ 0.44
VARS-228ENST00000495010 FGFR2P21802 821 aa17.82■□□□□ 0.44
VARS-228ENST00000495010 UBXN2AP68543 259 aa17.82■□□□□ 0.44
VARS-228ENST00000495010 MRPL50Q8N5N7 158 aaKnown RBP17.82■□□□□ 0.44
VARS-228ENST00000495010 PARK7Q99497 189 aaKnown RBP17.82■□□□□ 0.44
VARS-228ENST00000495010 GNL3LQ9NVN8 582 aaKnown RBP17.82■□□□□ 0.44
VARS-228ENST00000495010 KCNH4Q9UQ05 1017 aa17.82■□□□□ 0.44
VARS-228ENST00000495010 DAGLAQ9Y4D2 1042 aa17.82■□□□□ 0.44
VARS-228ENST00000495010 AK9Q5TCS8 1911 aa17.81■□□□□ 0.44
VARS-228ENST00000495010 EYA2O00167 538 aa17.81■□□□□ 0.44
VARS-228ENST00000495010 FCGRTP55899 365 aa17.81■□□□□ 0.44
VARS-228ENST00000495010 CDC42EP5Q6NZY7 148 aa17.81■□□□□ 0.44
VARS-228ENST00000495010 CHRDL2Q6WN34 429 aa17.81■□□□□ 0.44
VARS-228ENST00000495010 HTATIP2Q9BUP3 242 aa17.81■□□□□ 0.44
VARS-228ENST00000495010 USP40Q9NVE5 1235 aa17.81■□□□□ 0.44
VARS-228ENST00000495010 ZNF112Q9UJU3 913 aa17.81■□□□□ 0.44
VARS-228ENST00000495010 LDHBP07195 334 aaKnown RBP17.8■□□□□ 0.44
VARS-228ENST00000495010 CCL5P13501 91 aa17.8■□□□□ 0.44
VARS-228ENST00000495010 CTGFP29279 349 aa17.8■□□□□ 0.44
VARS-228ENST00000495010 DIXDC1Q155Q3 683 aa17.8■□□□□ 0.44
VARS-228ENST00000495010 NOL9Q5SY16 702 aaKnown RBP17.8■□□□□ 0.44
VARS-228ENST00000495010 RNF208Q9H0X6 261 aa17.8■□□□□ 0.44
VARS-228ENST00000495010 CENPFP49454 3210 aa17.79■□□□□ 0.44
VARS-228ENST00000495010 GJB1P08034 283 aa17.79■□□□□ 0.44
VARS-228ENST00000495010 SHISA4Q96DD7 197 aa17.79■□□□□ 0.44
VARS-228ENST00000495010 USP44Q9H0E7 712 aa17.79■□□□□ 0.44
VARS-228ENST00000495010 PICK1Q9NRD5 415 aa17.79■□□□□ 0.44
VARS-228ENST00000495010 MKI67P46013 3256 aaKnown RBP17.79■□□□□ 0.44
VARS-228ENST00000495010 MYH13Q9UKX3 1938 aa17.78■□□□□ 0.44
VARS-228ENST00000495010 CXCL11O14625 94 aa17.78■□□□□ 0.44
VARS-228ENST00000495010 GJA8P48165 433 aa17.78■□□□□ 0.44
VARS-228ENST00000495010 NFIAQ12857 509 aa17.78■□□□□ 0.44
VARS-228ENST00000495010 FASTKD5Q7L8L6 764 aaKnown RBP17.78■□□□□ 0.44
VARS-228ENST00000495010 ADGRA2Q96PE1 1338 aa17.77■□□□□ 0.44
VARS-228ENST00000495010 CYP2C8P10632 490 aa17.77■□□□□ 0.44
VARS-228ENST00000495010 PRDX5P30044 214 aa17.77■□□□□ 0.44
VARS-228ENST00000495010 PRKCZQ05513 592 aa17.77■□□□□ 0.44
VARS-228ENST00000495010 ATP2B3Q16720 1220 aa17.77■□□□□ 0.44
VARS-228ENST00000495010 ZSCAN29Q8IWY8 852 aaPredicted RBP17.77■□□□□ 0.44
VARS-228ENST00000495010 SLAIN1Q8ND83 568 aa17.77■□□□□ 0.44
VARS-228ENST00000495010 CEP126Q9P2H0 1117 aa17.77■□□□□ 0.44
VARS-228ENST00000495010 FAM198AQ9UFP1 575 aa17.77■□□□□ 0.44
VARS-228ENST00000495010 DENND2AQ9ULE3 1009 aa17.77■□□□□ 0.44
VARS-228ENST00000495010 NR2E3Q9Y5X4 410 aa17.77■□□□□ 0.44
VARS-228ENST00000495010 RFX5P48382 616 aaPredicted RBP17.76■□□□□ 0.43
VARS-228ENST00000495010 MOGSQ13724 837 aa17.76■□□□□ 0.43
VARS-228ENST00000495010 GADL1Q6ZQY3 521 aa17.76■□□□□ 0.43
VARS-228ENST00000495010 SCYL3Q8IZE3 742 aa17.76■□□□□ 0.43
VARS-228ENST00000495010 SIL1Q9H173 461 aa17.76■□□□□ 0.43
VARS-228ENST00000495010 RBM27Q9P2N5 1060 aaKnown RBP17.76■□□□□ 0.43
VARS-228ENST00000495010 ZHX2Q9Y6X8 837 aa17.76■□□□□ 0.43
VARS-228ENST00000495010 BCRP11274 1271 aa17.75■□□□□ 0.43
VARS-228ENST00000495010 GPAT2Q6NUI2 795 aa17.75■□□□□ 0.43
VARS-228ENST00000495010 ZGPATQ8N5A5 531 aaKnown RBP17.75■□□□□ 0.43
VARS-228ENST00000495010 FBXO3Q9UK99 471 aa17.75■□□□□ 0.43
VARS-228ENST00000495010 LRRFIP2Q9Y608 721 aaKnown RBP17.75■□□□□ 0.43
VARS-228ENST00000495010 SEMA3EO15041 775 aa17.74■□□□□ 0.43
VARS-228ENST00000495010 ADCY3O60266 1144 aa17.74■□□□□ 0.43
VARS-228ENST00000495010 FARP2O94887 1054 aaPredicted RBP17.74■□□□□ 0.43
VARS-228ENST00000495010 UBTFL1P0CB47 393 aaPredicted RBP17.74■□□□□ 0.43
VARS-228ENST00000495010 RGS3P49796 1198 aa17.74■□□□□ 0.43
VARS-228ENST00000495010 ATG9AQ7Z3C6 839 aa17.74■□□□□ 0.43
VARS-228ENST00000495010 ZFPM1Q8IX07 1006 aa17.74■□□□□ 0.43
VARS-228ENST00000495010 SLF2Q8IX21 1173 aa17.74■□□□□ 0.43
VARS-228ENST00000495010 SMCR8Q8TEV9 937 aaPredicted RBP17.74■□□□□ 0.43
VARS-228ENST00000495010 U2AF1L4Q8WU68 220 aaKnown RBP17.74■□□□□ 0.43
VARS-228ENST00000495010 SSH1Q8WYL5 1049 aa17.74■□□□□ 0.43
VARS-228ENST00000495010 BRCA2P51587 3418 aa17.73■□□□□ 0.43
VARS-228ENST00000495010 SALL1Q9NSC2 1324 aa17.73■□□□□ 0.43
VARS-228ENST00000495010 A0A0G2JLL6 359 aaPredicted RBP17.73■□□□□ 0.43
VARS-228ENST00000495010 ENTPD3O75355 529 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms