RNA–Protein interactions for RNA: ENST00000494795.1

SAMM50-206, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 3,248 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-206ENST00000494795 USP28Q96RU2 1077 aa12.22□□□□□ -0.45
SAMM50-206ENST00000494795 TOMM22Q9NS69 142 aa12.22□□□□□ -0.45
SAMM50-206ENST00000494795 CICQ96RK0 1608 aaPredicted RBP12.22□□□□□ -0.45
SAMM50-206ENST00000494795 TNRC6CQ9HCJ0 1690 aaKnown RBP12.22□□□□□ -0.45
SAMM50-206ENST00000494795 THSD7AQ9UPZ6 1657 aa12.22□□□□□ -0.45
SAMM50-206ENST00000494795 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.22□□□□□ -0.45
SAMM50-206ENST00000494795 NPHP1O15259 732 aa12.22□□□□□ -0.45
SAMM50-206ENST00000494795 ZNF274Q96GC6 653 aaPredicted RBP12.22□□□□□ -0.45
SAMM50-206ENST00000494795 NAPBQ9H115 298 aa12.22□□□□□ -0.45
SAMM50-206ENST00000494795 ARAP2Q8WZ64 1704 aa12.21□□□□□ -0.45
SAMM50-206ENST00000494795 ATRNO75882 1429 aa12.21□□□□□ -0.45
SAMM50-206ENST00000494795 MINDY4BA8MYZ0 360 aa12.21□□□□□ -0.45
SAMM50-206ENST00000494795 PATL2C9JE40 543 aaKnown RBP12.21□□□□□ -0.45
SAMM50-206ENST00000494795 AP5Z1O43299 807 aa12.21□□□□□ -0.45
SAMM50-206ENST00000494795 RFC4P35249 363 aa12.21□□□□□ -0.45
SAMM50-206ENST00000494795 KLHL34Q8N239 644 aa12.21□□□□□ -0.45
SAMM50-206ENST00000494795 CERKQ8TCT0 537 aa12.21□□□□□ -0.45
SAMM50-206ENST00000494795 IGDCC4Q8TDY8 1250 aa12.21□□□□□ -0.45
SAMM50-206ENST00000494795 DACT1Q9NYF0 836 aa12.21□□□□□ -0.45
SAMM50-206ENST00000494795 PDCP20941 246 aa12.21□□□□□ -0.46
SAMM50-206ENST00000494795 NLRP3Q96P20 1036 aa12.21□□□□□ -0.46
SAMM50-206ENST00000494795 TSPY26PQ9H489 355 aa12.21□□□□□ -0.46
SAMM50-206ENST00000494795 QTRT2Q9H974 415 aaKnown RBP12.21□□□□□ -0.46
SAMM50-206ENST00000494795 FAM217BQ9NTX9 383 aaPredicted RBP12.21□□□□□ -0.46
SAMM50-206ENST00000494795 ZNF804BA4D1E1 1349 aa12.21□□□□□ -0.46
SAMM50-206ENST00000494795 RTL9Q8NET4 1388 aa12.21□□□□□ -0.46
SAMM50-206ENST00000494795 LRRFIP1Q32MZ4 808 aaKnown RBP12.2□□□□□ -0.46
SAMM50-206ENST00000494795 ZSCAN25Q6NSZ9 544 aa12.2□□□□□ -0.46
SAMM50-206ENST00000494795 VPS37DQ86XT2 251 aa12.2□□□□□ -0.46
SAMM50-206ENST00000494795 ATP6V1DQ9Y5K8 247 aa12.2□□□□□ -0.46
SAMM50-206ENST00000494795 SH2B2O14492 632 aaPredicted RBP12.2□□□□□ -0.46
SAMM50-206ENST00000494795 RANBP6O60518 1105 aaKnown RBP12.2□□□□□ -0.46
SAMM50-206ENST00000494795 GUCY1A2P33402 732 aa12.2□□□□□ -0.46
SAMM50-206ENST00000494795 TDO2P48775 406 aa12.2□□□□□ -0.46
SAMM50-206ENST00000494795 EVCP57679 992 aa12.2□□□□□ -0.46
SAMM50-206ENST00000494795 SLC10A5Q5PT55 438 aa12.2□□□□□ -0.46
SAMM50-206ENST00000494795 CCDC183Q5T5S1 534 aa12.2□□□□□ -0.46
SAMM50-206ENST00000494795 PROM2Q8N271 834 aa12.2□□□□□ -0.46
SAMM50-206ENST00000494795 GOLPH3LQ9H4A5 285 aa12.2□□□□□ -0.46
SAMM50-206ENST00000494795 LY9Q9HBG7 655 aa12.2□□□□□ -0.46
SAMM50-206ENST00000494795 SPATA31A6Q5VVP1 1343 aa12.2□□□□□ -0.46
SAMM50-206ENST00000494795 RC3H1Q5TC82 1133 aaKnown RBP12.2□□□□□ -0.46
SAMM50-206ENST00000494795 OLFM4Q6UX06 510 aa12.2□□□□□ -0.46
SAMM50-206ENST00000494795 FUCA2Q9BTY2 467 aa12.2□□□□□ -0.46
SAMM50-206ENST00000494795 DOCK2Q92608 1830 aa12.19□□□□□ -0.46
SAMM50-206ENST00000494795 TRAPPC3LQ5T215 181 aa12.19□□□□□ -0.46
SAMM50-206ENST00000494795 APOA5Q6Q788 366 aa12.19□□□□□ -0.46
SAMM50-206ENST00000494795 RIOK1Q9BRS2 568 aaKnown RBP12.19□□□□□ -0.46
SAMM50-206ENST00000494795 ORC3Q9UBD5 711 aaPredicted RBP12.19□□□□□ -0.46
SAMM50-206ENST00000494795 ISY1Q9ULR0 285 aaKnown RBP12.19□□□□□ -0.46
SAMM50-206ENST00000494795 A0A1B0GUL6 1792 aa12.19□□□□□ -0.46
SAMM50-206ENST00000494795 C4AP0C0L4 1744 aa12.19□□□□□ -0.46
SAMM50-206ENST00000494795 SCN7AQ01118 1682 aa12.19□□□□□ -0.46
SAMM50-206ENST00000494795 TPTE2Q6XPS3 522 aa12.19□□□□□ -0.46
SAMM50-206ENST00000494795 ANGEL1Q9UNK9 670 aaKnown RBP12.19□□□□□ -0.46
SAMM50-206ENST00000494795 BAZ2AQ9UIF9 1905 aaKnown RBP12.19□□□□□ -0.46
SAMM50-206ENST00000494795 hCG_1642624A0A1W2PR95 340 aa12.18□□□□□ -0.46
SAMM50-206ENST00000494795 CYP2D6P10635 497 aa12.18□□□□□ -0.46
SAMM50-206ENST00000494795 AATFQ9NY61 560 aaKnown RBP eCLIP12.18□□□□□ -0.46
SAMM50-206ENST00000494795 USP25Q9UHP3 1055 aa12.18□□□□□ -0.46
SAMM50-206ENST00000494795 CLIC4Q9Y696 253 aa12.18□□□□□ -0.46
SAMM50-206ENST00000494795 SBF2Q86WG5 1849 aa12.18□□□□□ -0.46
SAMM50-206ENST00000494795 TAF1LQ8IZX4 1826 aa12.18□□□□□ -0.46
SAMM50-206ENST00000494795 NMT2O60551 498 aa12.18□□□□□ -0.46
SAMM50-206ENST00000494795 PPP1R9BQ96SB3 815 aa12.18□□□□□ -0.46
SAMM50-206ENST00000494795 LLPHQ9BRT6 129 aaKnown RBP12.18□□□□□ -0.46
SAMM50-206ENST00000494795 NHSQ6T4R5 1651 aa12.18□□□□□ -0.46
SAMM50-206ENST00000494795 CACNA1SQ13698 1873 aa12.18□□□□□ -0.46
SAMM50-206ENST00000494795 MECOMQ03112 1051 aa12.18□□□□□ -0.46
SAMM50-206ENST00000494795 TRDNQ13061 729 aa12.18□□□□□ -0.46
SAMM50-206ENST00000494795 UBE4AQ14139 1066 aa12.18□□□□□ -0.46
SAMM50-206ENST00000494795 TMEM67Q5HYA8 995 aa12.18□□□□□ -0.46
SAMM50-206ENST00000494795 FBXO33Q7Z6M2 555 aa12.18□□□□□ -0.46
SAMM50-206ENST00000494795 C4BP0C0L5 1744 aa12.18□□□□□ -0.46
SAMM50-206ENST00000494795 AKNAD1Q5T1N1 836 aa12.17□□□□□ -0.46
SAMM50-206ENST00000494795 PRR5LQ6MZQ0 368 aa12.17□□□□□ -0.46
SAMM50-206ENST00000494795 NFXL1Q6ZNB6 911 aa12.17□□□□□ -0.46
SAMM50-206ENST00000494795 FAM43AQ8N2R8 423 aa12.17□□□□□ -0.46
SAMM50-206ENST00000494795 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.17□□□□□ -0.46
SAMM50-206ENST00000494795 IFIT3O14879 490 aaKnown RBP12.17□□□□□ -0.46
SAMM50-206ENST00000494795 GYS1P13807 737 aa12.17□□□□□ -0.46
SAMM50-206ENST00000494795 METAP2P50579 478 aaKnown RBP eCLIP12.17□□□□□ -0.46
SAMM50-206ENST00000494795 BICD2Q8TD16 824 aa12.17□□□□□ -0.46
SAMM50-206ENST00000494795 MYH13Q9UKX3 1938 aa12.17□□□□□ -0.46
SAMM50-206ENST00000494795 MAGEB6P1A0A0J9YX57 407 aa12.16□□□□□ -0.46
SAMM50-206ENST00000494795 CPLX1O14810 134 aa12.16□□□□□ -0.46
SAMM50-206ENST00000494795 DIXDC1Q155Q3 683 aa12.16□□□□□ -0.46
SAMM50-206ENST00000494795 NTRK3Q16288 839 aa12.16□□□□□ -0.46
SAMM50-206ENST00000494795 CAVIN4Q5BKX8 364 aa12.16□□□□□ -0.46
SAMM50-206ENST00000494795 FBXL16Q8N461 479 aa12.16□□□□□ -0.46
SAMM50-206ENST00000494795 FBXW7Q969H0 707 aa12.16□□□□□ -0.46
SAMM50-206ENST00000494795 NSUN4Q96CB9 384 aaKnown RBP12.16□□□□□ -0.46
SAMM50-206ENST00000494795 ZNF830Q96NB3 372 aaPredicted RBP12.16□□□□□ -0.46
SAMM50-206ENST00000494795 ANKIB1Q9P2G1 1089 aa12.16□□□□□ -0.46
SAMM50-206ENST00000494795 ONECUT3O60422 494 aaPredicted RBP12.16□□□□□ -0.46
SAMM50-206ENST00000494795 PPARAQ07869 468 aa12.16□□□□□ -0.46
SAMM50-206ENST00000494795 MKRN4PQ13434 485 aaPredicted RBP12.16□□□□□ -0.46
SAMM50-206ENST00000494795 MFSD6Q6ZSS7 791 aa12.16□□□□□ -0.46
SAMM50-206ENST00000494795 SHISA4Q96DD7 197 aa12.16□□□□□ -0.46
SAMM50-206ENST00000494795 C8orf76Q96K31 380 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms