RNA–Protein interactions for RNA: ENST00000493618.5

ATG4B-223, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-223ENST00000493618 XAGE2Q96GT9 111 aa18.16■□□□□ 0.5
ATG4B-223ENST00000493618 HPS5Q9UPZ3 1129 aa18.16■□□□□ 0.5
ATG4B-223ENST00000493618 PNMA6EA0A0J9YXQ4 647 aa18.15■□□□□ 0.5
ATG4B-223ENST00000493618 TNRC18O15417 2968 aaPredicted RBP18.15■□□□□ 0.5
ATG4B-223ENST00000493618 SLC34A2O95436 690 aa18.15■□□□□ 0.5
ATG4B-223ENST00000493618 RGS19P49795 217 aa18.15■□□□□ 0.5
ATG4B-223ENST00000493618 MTX1Q13505 466 aa18.15■□□□□ 0.5
ATG4B-223ENST00000493618 NOM1Q5C9Z4 860 aaKnown RBP18.15■□□□□ 0.5
ATG4B-223ENST00000493618 ZKSCAN2Q63HK3 967 aa18.15■□□□□ 0.5
ATG4B-223ENST00000493618 ZKSCAN4Q969J2 545 aaPredicted RBP18.15■□□□□ 0.5
ATG4B-223ENST00000493618 NEUROD6Q96NK8 337 aa18.15■□□□□ 0.5
ATG4B-223ENST00000493618 WRNIP1Q96S55 665 aa18.15■□□□□ 0.5
ATG4B-223ENST00000493618 SALL1Q9NSC2 1324 aa18.15■□□□□ 0.5
ATG4B-223ENST00000493618 SEMA3EO15041 775 aa18.14■□□□□ 0.49
ATG4B-223ENST00000493618 NFIAQ12857 509 aa18.14■□□□□ 0.49
ATG4B-223ENST00000493618 CRHR2Q13324 411 aa18.14■□□□□ 0.49
ATG4B-223ENST00000493618 RASGRF1Q13972 1273 aa18.14■□□□□ 0.49
ATG4B-223ENST00000493618 FKBP1CQ5VVH2 108 aa18.14■□□□□ 0.49
ATG4B-223ENST00000493618 MS4A4AQ96JQ5 239 aa18.14■□□□□ 0.49
ATG4B-223ENST00000493618 USP40Q9NVE5 1235 aa18.14■□□□□ 0.49
ATG4B-223ENST00000493618 ABCF2Q9UG63 623 aa18.14■□□□□ 0.49
ATG4B-223ENST00000493618 SNCAIPQ9Y6H5 919 aa18.14■□□□□ 0.49
ATG4B-223ENST00000493618 ZSWIM8A7E2V4 1837 aa18.14■□□□□ 0.49
ATG4B-223ENST00000493618 MYO5AQ9Y4I1 1855 aaKnown RBP18.14■□□□□ 0.49
ATG4B-223ENST00000493618 CCL15-CCL14A0A0B4J2E2 113 aa18.13■□□□□ 0.49
ATG4B-223ENST00000493618 TESPA1A2RU30 521 aaPredicted RBP18.13■□□□□ 0.49
ATG4B-223ENST00000493618 CCL15Q16663 113 aa18.13■□□□□ 0.49
ATG4B-223ENST00000493618 OTUD7BQ6GQQ9 843 aa18.13■□□□□ 0.49
ATG4B-223ENST00000493618 FAM151AQ8WW52 585 aa18.13■□□□□ 0.49
ATG4B-223ENST00000493618 BRI3BPQ8WY22 251 aa18.13■□□□□ 0.49
ATG4B-223ENST00000493618 C1orf115Q9H7X2 142 aa18.13■□□□□ 0.49
ATG4B-223ENST00000493618 AKAP2Q9Y2D5 859 aa18.13■□□□□ 0.49
ATG4B-223ENST00000493618 RPAP1Q9BWH6 1393 aaPredicted RBP18.13■□□□□ 0.49
ATG4B-223ENST00000493618 PKN2Q16513 984 aaKnown RBP18.12■□□□□ 0.49
ATG4B-223ENST00000493618 DZIP1Q86YF9 867 aaKnown RBP18.12■□□□□ 0.49
ATG4B-223ENST00000493618 ZFPM1Q8IX07 1006 aa18.12■□□□□ 0.49
ATG4B-223ENST00000493618 ZNF341Q9BYN7 854 aa18.12■□□□□ 0.49
ATG4B-223ENST00000493618 FAM198AQ9UFP1 575 aa18.12■□□□□ 0.49
ATG4B-223ENST00000493618 SPDYE5A6NIY4 337 aa18.11■□□□□ 0.49
ATG4B-223ENST00000493618 INPP5BP32019 993 aa18.11■□□□□ 0.49
ATG4B-223ENST00000493618 GTF2A2P52657 109 aa18.11■□□□□ 0.49
ATG4B-223ENST00000493618 G3BP1Q13283 466 aaKnown RBP eCLIP18.11■□□□□ 0.49
ATG4B-223ENST00000493618 MVPQ14764 893 aaKnown RBP18.11■□□□□ 0.49
ATG4B-223ENST00000493618 DCAF15Q66K64 600 aa18.11■□□□□ 0.49
ATG4B-223ENST00000493618 FBXO46Q6PJ61 603 aaPredicted RBP18.11■□□□□ 0.49
ATG4B-223ENST00000493618 PI16Q6UXB8 463 aa18.11■□□□□ 0.49
ATG4B-223ENST00000493618 ZGPATQ8N5A5 531 aaKnown RBP18.11■□□□□ 0.49
ATG4B-223ENST00000493618 CD99L2Q8TCZ2 262 aa18.11■□□□□ 0.49
ATG4B-223ENST00000493618 HOOK2Q96ED9 719 aa18.11■□□□□ 0.49
ATG4B-223ENST00000493618 TRIM17Q9Y577 477 aa18.11■□□□□ 0.49
ATG4B-223ENST00000493618 GORABQ5T7V8 394 aa18.1■□□□□ 0.49
ATG4B-223ENST00000493618 RLBP1P12271 317 aa18.09■□□□□ 0.49
ATG4B-223ENST00000493618 RGS3P49796 1198 aa18.09■□□□□ 0.49
ATG4B-223ENST00000493618 TAF1CQ15572 869 aaPredicted RBP18.09■□□□□ 0.49
ATG4B-223ENST00000493618 ERO1BQ86YB8 467 aa18.09■□□□□ 0.49
ATG4B-223ENST00000493618 ITPRIPQ8IWB1 547 aa18.09■□□□□ 0.49
ATG4B-223ENST00000493618 FTSJ3Q8IY81 847 aaKnown RBP18.09■□□□□ 0.49
ATG4B-223ENST00000493618 FAM43AQ8N2R8 423 aa18.09■□□□□ 0.49
ATG4B-223ENST00000493618 HMG20BQ9P0W2 317 aa18.09■□□□□ 0.49
ATG4B-223ENST00000493618 DOCK1Q14185 1865 aa18.08■□□□□ 0.49
ATG4B-223ENST00000493618 CDK5RAP2Q96SN8 1893 aa18.08■□□□□ 0.49
ATG4B-223ENST00000493618 GAKO14976 1311 aa18.08■□□□□ 0.49
ATG4B-223ENST00000493618 PDS5AQ29RF7 1337 aaKnown RBP18.08■□□□□ 0.49
ATG4B-223ENST00000493618 IRF6O14896 467 aa18.08■□□□□ 0.48
ATG4B-223ENST00000493618 BTDP43251 543 aa18.08■□□□□ 0.48
ATG4B-223ENST00000493618 CAP1Q01518 475 aa18.08■□□□□ 0.48
ATG4B-223ENST00000493618 SPTY2D1Q68D10 685 aaPredicted RBP18.08■□□□□ 0.48
ATG4B-223ENST00000493618 TBC1D9Q6ZT07 1266 aa18.08■□□□□ 0.48
ATG4B-223ENST00000493618 ERICH6Q7L0X2 663 aa18.08■□□□□ 0.48
ATG4B-223ENST00000493618 OTOP1Q7RTM1 612 aa18.08■□□□□ 0.48
ATG4B-223ENST00000493618 ERO1AQ96HE7 468 aa18.08■□□□□ 0.48
ATG4B-223ENST00000493618 MAST2Q6P0Q8 1798 aa18.08■□□□□ 0.48
ATG4B-223ENST00000493618 ATAD5Q96QE3 1844 aa18.07■□□□□ 0.48
ATG4B-223ENST00000493618 SLURP2P0DP57 97 aa18.07■□□□□ 0.48
ATG4B-223ENST00000493618 SP3Q02447 781 aa18.07■□□□□ 0.48
ATG4B-223ENST00000493618 MECOMQ03112 1051 aa18.07■□□□□ 0.48
ATG4B-223ENST00000493618 PPIL2Q13356 520 aa18.07■□□□□ 0.48
ATG4B-223ENST00000493618 OS9Q13438 667 aaPredicted RBP18.07■□□□□ 0.48
ATG4B-223ENST00000493618 PICALMQ13492 652 aa18.07■□□□□ 0.48
ATG4B-223ENST00000493618 SPATA5Q8NB90 893 aa18.07■□□□□ 0.48
ATG4B-223ENST00000493618 PHIPQ8WWQ0 1821 aa18.07■□□□□ 0.48
ATG4B-223ENST00000493618 MROH7-TTC4A0A0A0MT08 1334 aa18.06■□□□□ 0.48
ATG4B-223ENST00000493618 ZBTB22O15209 634 aa18.06■□□□□ 0.48
ATG4B-223ENST00000493618 CETPP11597 493 aa18.06■□□□□ 0.48
ATG4B-223ENST00000493618 ATP8B2P98198 1209 aa18.06■□□□□ 0.48
ATG4B-223ENST00000493618 POLA2Q14181 598 aa18.06■□□□□ 0.48
ATG4B-223ENST00000493618 ZSCAN29Q8IWY8 852 aaPredicted RBP18.06■□□□□ 0.48
ATG4B-223ENST00000493618 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.06■□□□□ 0.48
ATG4B-223ENST00000493618 ZNF384Q8TF68 577 aa18.06■□□□□ 0.48
ATG4B-223ENST00000493618 ZFYVE28Q9HCC9 887 aa18.06■□□□□ 0.48
ATG4B-223ENST00000493618 DDX4Q9NQI0 724 aaKnown RBP18.06■□□□□ 0.48
ATG4B-223ENST00000493618 ZNF112Q9UJU3 913 aa18.06■□□□□ 0.48
ATG4B-223ENST00000493618 PTPRFP10586 1907 aa18.06■□□□□ 0.48
ATG4B-223ENST00000493618 RFX7Q2KHR2 1363 aa18.05■□□□□ 0.48
ATG4B-223ENST00000493618 ZBED9Q6R2W3 1325 aa18.05■□□□□ 0.48
ATG4B-223ENST00000493618 BTBD19C9JJ37 291 aa18.05■□□□□ 0.48
ATG4B-223ENST00000493618 ARID4AP29374 1257 aaPredicted RBP18.05■□□□□ 0.48
ATG4B-223ENST00000493618 MCAMP43121 646 aa18.05■□□□□ 0.48
ATG4B-223ENST00000493618 PPATQ06203 517 aa18.05■□□□□ 0.48
ATG4B-223ENST00000493618 SNAPC2Q13487 334 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms