RNA–Protein interactions for RNA: ENST00000488910.1

ATG3-205, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 681 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-205ENST00000488910 FPGT-TNNI3KV9GXZ4 949 aa21.51■■□□□ 1.03
ATG3-205ENST00000488910 SREBF2Q12772 1141 aa21.5■■□□□ 1.03
ATG3-205ENST00000488910 CDC42EP5Q6NZY7 148 aa21.5■■□□□ 1.03
ATG3-205ENST00000488910 ERICH6Q7L0X2 663 aa21.5■■□□□ 1.03
ATG3-205ENST00000488910 DZIP1Q86YF9 867 aaKnown RBP21.5■■□□□ 1.03
ATG3-205ENST00000488910 COG6Q9Y2V7 657 aa21.5■■□□□ 1.03
ATG3-205ENST00000488910 ZBTB48P10074 688 aaPredicted RBP21.49■■□□□ 1.03
ATG3-205ENST00000488910 INHBEP58166 350 aa21.49■■□□□ 1.03
ATG3-205ENST00000488910 PDE3AQ14432 1141 aa21.49■■□□□ 1.03
ATG3-205ENST00000488910 CCDC158Q5M9N0 1113 aa21.49■■□□□ 1.03
ATG3-205ENST00000488910 RPAP2Q8IXW5 612 aaPredicted RBP21.49■■□□□ 1.03
ATG3-205ENST00000488910 FAM151AQ8WW52 585 aa21.49■■□□□ 1.03
ATG3-205ENST00000488910 ZBTB40Q9NUA8 1239 aa21.49■■□□□ 1.03
ATG3-205ENST00000488910 USP40Q9NVE5 1235 aa21.49■■□□□ 1.03
ATG3-205ENST00000488910 MKRN3Q13064 507 aaKnown RBP21.48■■□□□ 1.03
ATG3-205ENST00000488910 HSP90AB4PQ58FF6 505 aa21.48■■□□□ 1.03
ATG3-205ENST00000488910 ERC1Q8IUD2 1116 aa21.48■■□□□ 1.03
ATG3-205ENST00000488910 CDAN1Q8IWY9 1227 aa21.48■■□□□ 1.03
ATG3-205ENST00000488910 WNK4Q96J92 1243 aa21.48■■□□□ 1.03
ATG3-205ENST00000488910 CLMNQ96JQ2 1002 aa21.48■■□□□ 1.03
ATG3-205ENST00000488910 GAKO14976 1311 aa21.48■■□□□ 1.03
ATG3-205ENST00000488910 MYH2Q9UKX2 1941 aa21.47■■□□□ 1.03
ATG3-205ENST00000488910 MANSC4A6NHS7 340 aaPredicted RBP21.47■■□□□ 1.03
ATG3-205ENST00000488910 MAP3K9P80192 1104 aa21.47■■□□□ 1.03
ATG3-205ENST00000488910 ZNF512BQ96KM6 892 aaPredicted RBP21.47■■□□□ 1.03
ATG3-205ENST00000488910 RPAP1Q9BWH6 1393 aaPredicted RBP21.47■■□□□ 1.03
ATG3-205ENST00000488910 MCAMP43121 646 aa21.46■■□□□ 1.03
ATG3-205ENST00000488910 GSTO1P78417 241 aa21.46■■□□□ 1.03
ATG3-205ENST00000488910 TTC39AQ5SRH9 613 aa21.46■■□□□ 1.03
ATG3-205ENST00000488910 DCAF15Q66K64 600 aa21.46■■□□□ 1.03
ATG3-205ENST00000488910 DBNDD2Q9BQY9 259 aa21.46■■□□□ 1.03
ATG3-205ENST00000488910 CASP8AP2Q9UKL3 1982 aa21.46■■□□□ 1.03
ATG3-205ENST00000488910 HMMRO75330 724 aa21.45■■□□□ 1.02
ATG3-205ENST00000488910 LDHCP07864 332 aa21.45■■□□□ 1.02
ATG3-205ENST00000488910 MECOMQ03112 1051 aa21.45■■□□□ 1.02
ATG3-205ENST00000488910 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.45■■□□□ 1.02
ATG3-205ENST00000488910 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.45■■□□□ 1.02
ATG3-205ENST00000488910 IDI2Q9BXS1 227 aa21.45■■□□□ 1.02
ATG3-205ENST00000488910 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.45■■□□□ 1.02
ATG3-205ENST00000488910 IGSF3O75054 1194 aa21.44■■□□□ 1.02
ATG3-205ENST00000488910 ALDH1A1P00352 501 aa21.44■■□□□ 1.02
ATG3-205ENST00000488910 PI16Q6UXB8 463 aa21.44■■□□□ 1.02
ATG3-205ENST00000488910 TBC1D9Q6ZT07 1266 aa21.44■■□□□ 1.02
ATG3-205ENST00000488910 EXOC6BQ9Y2D4 811 aa21.44■■□□□ 1.02
ATG3-205ENST00000488910 CSADQ9Y600 493 aa21.44■■□□□ 1.02
ATG3-205ENST00000488910 GPR75-ASB3A0A0A6YYF3 556 aa21.43■■□□□ 1.02
ATG3-205ENST00000488910 MAP4K4O95819 1239 aaPredicted RBP21.43■■□□□ 1.02
ATG3-205ENST00000488910 TCP10Q12799 353 aa21.43■■□□□ 1.02
ATG3-205ENST00000488910 NFIAQ12857 509 aa21.43■■□□□ 1.02
ATG3-205ENST00000488910 NSUN4Q96CB9 384 aaKnown RBP21.43■■□□□ 1.02
ATG3-205ENST00000488910 EAF2Q96CJ1 260 aaPredicted RBP21.43■■□□□ 1.02
ATG3-205ENST00000488910 LRP2BPQ9P2M1 347 aa21.43■■□□□ 1.02
ATG3-205ENST00000488910 FAM198AQ9UFP1 575 aa21.43■■□□□ 1.02
ATG3-205ENST00000488910 MROH7-TTC4A0A0A0MT08 1334 aa21.43■■□□□ 1.02
ATG3-205ENST00000488910 ENTPD3O75355 529 aa21.42■■□□□ 1.02
ATG3-205ENST00000488910 BTDP43251 543 aa21.42■■□□□ 1.02
ATG3-205ENST00000488910 VGLL4Q14135 290 aa21.42■■□□□ 1.02
ATG3-205ENST00000488910 OPTNQ96CV9 577 aa21.42■■□□□ 1.02
ATG3-205ENST00000488910 CFHR5Q9BXR6 569 aa21.42■■□□□ 1.02
ATG3-205ENST00000488910 ZNF341Q9BYN7 854 aa21.42■■□□□ 1.02
ATG3-205ENST00000488910 CCDC8Q9H0W5 538 aaPredicted RBP21.42■■□□□ 1.02
ATG3-205ENST00000488910 ELP3Q9H9T3 547 aa21.42■■□□□ 1.02
ATG3-205ENST00000488910 RAI14Q9P0K7 980 aa21.42■■□□□ 1.02
ATG3-205ENST00000488910 DBNLQ9UJU6 430 aaKnown RBP21.42■■□□□ 1.02
ATG3-205ENST00000488910 AK9Q5TCS8 1911 aa21.41■■□□□ 1.02
ATG3-205ENST00000488910 GJA5P36382 358 aa21.41■■□□□ 1.02
ATG3-205ENST00000488910 NOM1Q5C9Z4 860 aaKnown RBP21.41■■□□□ 1.02
ATG3-205ENST00000488910 C20orf194Q5TEA3 1177 aa21.41■■□□□ 1.02
ATG3-205ENST00000488910 IFNL1Q8IU54 200 aa21.41■■□□□ 1.02
ATG3-205ENST00000488910 ZNF384Q8TF68 577 aa21.41■■□□□ 1.02
ATG3-205ENST00000488910 TBC1D8O95759 1140 aa21.4■■□□□ 1.02
ATG3-205ENST00000488910 RGS3P49796 1198 aa21.4■■□□□ 1.02
ATG3-205ENST00000488910 OTUD7BQ6GQQ9 843 aa21.4■■□□□ 1.02
ATG3-205ENST00000488910 MIGA2Q7L4E1 593 aa21.4■■□□□ 1.02
ATG3-205ENST00000488910 SIRT2Q8IXJ6 389 aa21.4■■□□□ 1.02
ATG3-205ENST00000488910 RHPN1Q8TCX5 695 aa21.4■■□□□ 1.02
ATG3-205ENST00000488910 WRNIP1Q96S55 665 aa21.4■■□□□ 1.02
ATG3-205ENST00000488910 SNRKQ9NRH2 765 aa21.4■■□□□ 1.02
ATG3-205ENST00000488910 OTOFQ9HC10 1997 aa21.39■■□□□ 1.02
ATG3-205ENST00000488910 TESPA1A2RU30 521 aaPredicted RBP21.39■■□□□ 1.01
ATG3-205ENST00000488910 RAB11FIP3O75154 756 aa21.39■■□□□ 1.01
ATG3-205ENST00000488910 NPM3O75607 178 aaKnown RBP21.39■■□□□ 1.01
ATG3-205ENST00000488910 KIF1BPQ96EK5 621 aa21.39■■□□□ 1.01
ATG3-205ENST00000488910 ZNF112Q9UJU3 913 aa21.39■■□□□ 1.01
ATG3-205ENST00000488910 LAMB1P07942 1786 aa21.38■■□□□ 1.01
ATG3-205ENST00000488910 WDHD1O75717 1129 aaPredicted RBP21.38■■□□□ 1.01
ATG3-205ENST00000488910 CYP2E1P05181 493 aaPredicted RBP21.38■■□□□ 1.01
ATG3-205ENST00000488910 RHBDL3P58872 404 aa21.38■■□□□ 1.01
ATG3-205ENST00000488910 AACSQ86V21 672 aa21.38■■□□□ 1.01
ATG3-205ENST00000488910 ERO1BQ86YB8 467 aa21.38■■□□□ 1.01
ATG3-205ENST00000488910 ZFPM1Q8IX07 1006 aa21.38■■□□□ 1.01
ATG3-205ENST00000488910 TLR7Q9NYK1 1049 aaKnown RBP21.38■■□□□ 1.01
ATG3-205ENST00000488910 RFX7Q2KHR2 1363 aa21.37■■□□□ 1.01
ATG3-205ENST00000488910 SPDYE5A6NIY4 337 aa21.37■■□□□ 1.01
ATG3-205ENST00000488910 CAPN15O75808 1086 aa21.37■■□□□ 1.01
ATG3-205ENST00000488910 ZAP70P43403 619 aa21.37■■□□□ 1.01
ATG3-205ENST00000488910 GTF2A2P52657 109 aa21.37■■□□□ 1.01
ATG3-205ENST00000488910 NAA16Q6N069 864 aaPredicted RBP21.37■■□□□ 1.01
ATG3-205ENST00000488910 CLASRPQ8N2M8 674 aaKnown RBP21.37■■□□□ 1.01
ATG3-205ENST00000488910 ZKSCAN4Q969J2 545 aaPredicted RBP21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms