RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 IL1RAPL2Q9NP60 686 aa19.58■□□□□ 0.72
CTDSP1-209ENST00000488627 SNRKQ9NRH2 765 aa19.58■□□□□ 0.72
CTDSP1-209ENST00000488627 PPP1R12BO60237 982 aaPredicted RBP19.57■□□□□ 0.72
CTDSP1-209ENST00000488627 RAB11FIP3O75154 756 aa19.57■□□□□ 0.72
CTDSP1-209ENST00000488627 TNNI2P48788 182 aa19.57■□□□□ 0.72
CTDSP1-209ENST00000488627 AACSQ86V21 672 aa19.57■□□□□ 0.72
CTDSP1-209ENST00000488627 DZIP1Q86YF9 867 aaKnown RBP19.57■□□□□ 0.72
CTDSP1-209ENST00000488627 NSUN4Q96CB9 384 aaKnown RBP19.57■□□□□ 0.72
CTDSP1-209ENST00000488627 KIF1BPQ96EK5 621 aa19.57■□□□□ 0.72
CTDSP1-209ENST00000488627 THSD7BQ9C0I4 1608 aa19.57■□□□□ 0.72
CTDSP1-209ENST00000488627 CYP2E1P05181 493 aaPredicted RBP19.56■□□□□ 0.72
CTDSP1-209ENST00000488627 NFIAQ12857 509 aa19.56■□□□□ 0.72
CTDSP1-209ENST00000488627 AIDAQ96BJ3 306 aa19.56■□□□□ 0.72
CTDSP1-209ENST00000488627 USP40Q9NVE5 1235 aa19.56■□□□□ 0.72
CTDSP1-209ENST00000488627 TMOD2Q9NZR1 351 aa19.56■□□□□ 0.72
CTDSP1-209ENST00000488627 GPR75-ASB3A0A0A6YYF3 556 aa19.55■□□□□ 0.72
CTDSP1-209ENST00000488627 ZAP70P43403 619 aa19.55■□□□□ 0.72
CTDSP1-209ENST00000488627 COL13A1Q5TAT6 717 aaPredicted RBP19.55■□□□□ 0.72
CTDSP1-209ENST00000488627 CSRNP1Q96S65 589 aa19.55■□□□□ 0.72
CTDSP1-209ENST00000488627 FAM198AQ9UFP1 575 aa19.55■□□□□ 0.72
CTDSP1-209ENST00000488627 UNCXA6NJT0 531 aa19.54■□□□□ 0.72
CTDSP1-209ENST00000488627 APBB1O00213 710 aa19.54■□□□□ 0.72
CTDSP1-209ENST00000488627 HSPA8P11142 646 aaKnown RBP19.54■□□□□ 0.72
CTDSP1-209ENST00000488627 CTCFP49711 727 aaPredicted RBP19.54■□□□□ 0.72
CTDSP1-209ENST00000488627 SLF2Q8IX21 1173 aa19.54■□□□□ 0.72
CTDSP1-209ENST00000488627 CLASRPQ8N2M8 674 aaKnown RBP19.54■□□□□ 0.72
CTDSP1-209ENST00000488627 FAM151AQ8WW52 585 aa19.54■□□□□ 0.72
CTDSP1-209ENST00000488627 CLMNQ96JQ2 1002 aa19.54■□□□□ 0.72
CTDSP1-209ENST00000488627 IDI2Q9BXS1 227 aa19.54■□□□□ 0.72
CTDSP1-209ENST00000488627 PCDHB15Q9Y5E8 787 aa19.54■□□□□ 0.72
CTDSP1-209ENST00000488627 MROH7-TTC4A0A0A0MT08 1334 aa19.53■□□□□ 0.72
CTDSP1-209ENST00000488627 BTDP43251 543 aa19.53■□□□□ 0.72
CTDSP1-209ENST00000488627 RHBDL3P58872 404 aa19.53■□□□□ 0.72
CTDSP1-209ENST00000488627 ZFPM1Q8IX07 1006 aa19.53■□□□□ 0.72
CTDSP1-209ENST00000488627 PIH1D3Q9NQM4 214 aaKnown RBP19.53■□□□□ 0.72
CTDSP1-209ENST00000488627 RAI14Q9P0K7 980 aa19.53■□□□□ 0.72
CTDSP1-209ENST00000488627 LRP2BPQ9P2M1 347 aa19.53■□□□□ 0.72
CTDSP1-209ENST00000488627 WDHD1O75717 1129 aaPredicted RBP19.52■□□□□ 0.72
CTDSP1-209ENST00000488627 IREB2P48200 963 aaKnown RBP19.52■□□□□ 0.72
CTDSP1-209ENST00000488627 TCP10Q12799 353 aa19.52■□□□□ 0.72
CTDSP1-209ENST00000488627 SPRYD7Q5W111 196 aa19.52■□□□□ 0.72
CTDSP1-209ENST00000488627 SLC10A4Q96EP9 437 aa19.52■□□□□ 0.72
CTDSP1-209ENST00000488627 DCTPP1Q9H773 170 aa19.52■□□□□ 0.72
CTDSP1-209ENST00000488627 ECM29Q5VYK3 1845 aa19.52■□□□□ 0.72
CTDSP1-209ENST00000488627 LDHCP07864 332 aa19.51■□□□□ 0.71
CTDSP1-209ENST00000488627 LBX1P52954 281 aa19.51■□□□□ 0.71
CTDSP1-209ENST00000488627 GSTO1P78417 241 aa19.51■□□□□ 0.71
CTDSP1-209ENST00000488627 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.51■□□□□ 0.71
CTDSP1-209ENST00000488627 CRBNQ96SW2 442 aa19.51■□□□□ 0.71
CTDSP1-209ENST00000488627 BEGAINQ9BUH8 593 aa19.51■□□□□ 0.71
CTDSP1-209ENST00000488627 PRDM10Q9NQV6 1147 aa19.51■□□□□ 0.71
CTDSP1-209ENST00000488627 NDUFB9Q9Y6M9 179 aa19.51■□□□□ 0.71
CTDSP1-209ENST00000488627 RFX7Q2KHR2 1363 aa19.51■□□□□ 0.71
CTDSP1-209ENST00000488627 RPAP1Q9BWH6 1393 aaPredicted RBP19.51■□□□□ 0.71
CTDSP1-209ENST00000488627 CA12O43570 354 aa19.5■□□□□ 0.71
CTDSP1-209ENST00000488627 IGSF3O75054 1194 aa19.5■□□□□ 0.71
CTDSP1-209ENST00000488627 ENTPD3O75355 529 aa19.5■□□□□ 0.71
CTDSP1-209ENST00000488627 RGS3P49796 1198 aa19.5■□□□□ 0.71
CTDSP1-209ENST00000488627 ANKRD13AQ8IZ07 590 aa19.5■□□□□ 0.71
CTDSP1-209ENST00000488627 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.5■□□□□ 0.712e-6■□□□□ 8
CTDSP1-209ENST00000488627 ANTXR1Q9H6X2 564 aa19.5■□□□□ 0.71
CTDSP1-209ENST00000488627 DDX4Q9NQI0 724 aaKnown RBP19.5■□□□□ 0.71
CTDSP1-209ENST00000488627 IFIT2P09913 472 aaKnown RBP19.49■□□□□ 0.71
CTDSP1-209ENST00000488627 GJA5P36382 358 aa19.49■□□□□ 0.71
CTDSP1-209ENST00000488627 TM4SF4P48230 202 aa19.49■□□□□ 0.71
CTDSP1-209ENST00000488627 MAP3K9P80192 1104 aa19.49■□□□□ 0.71
CTDSP1-209ENST00000488627 MKRN3Q13064 507 aaKnown RBP19.49■□□□□ 0.71
CTDSP1-209ENST00000488627 SH3BP5LQ7L8J4 393 aa19.49■□□□□ 0.71
CTDSP1-209ENST00000488627 REM2Q8IYK8 340 aaPredicted RBP19.49■□□□□ 0.71
CTDSP1-209ENST00000488627 RNF186Q9NXI6 227 aa19.49■□□□□ 0.71
CTDSP1-209ENST00000488627 TSKSQ9UJT2 592 aa19.49■□□□□ 0.71
CTDSP1-209ENST00000488627 MYH13Q9UKX3 1938 aa19.49■□□□□ 0.71
CTDSP1-209ENST00000488627 NPM3O75607 178 aaKnown RBP19.48■□□□□ 0.71
CTDSP1-209ENST00000488627 NAA16Q6N069 864 aaPredicted RBP19.48■□□□□ 0.71
CTDSP1-209ENST00000488627 MIGA2Q7L4E1 593 aa19.48■□□□□ 0.71
CTDSP1-209ENST00000488627 ADGRA1Q86SQ6 560 aa19.48■□□□□ 0.71
CTDSP1-209ENST00000488627 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.48■□□□□ 0.71
CTDSP1-209ENST00000488627 WNK4Q96J92 1243 aa19.48■□□□□ 0.71
CTDSP1-209ENST00000488627 LRRCC1Q9C099 1032 aa19.48■□□□□ 0.71
CTDSP1-209ENST00000488627 SMARCA5O60264 1052 aaPredicted RBP19.47■□□□□ 0.71
CTDSP1-209ENST00000488627 MAP4K4O95819 1239 aaPredicted RBP19.47■□□□□ 0.71
CTDSP1-209ENST00000488627 PPP4CP60510 307 aa19.47■□□□□ 0.71
CTDSP1-209ENST00000488627 VGLL4Q14135 290 aa19.47■□□□□ 0.71
CTDSP1-209ENST00000488627 HOOK2Q96ED9 719 aa19.47■□□□□ 0.71
CTDSP1-209ENST00000488627 AKAP11Q9UKA4 1901 aa19.47■□□□□ 0.71
CTDSP1-209ENST00000488627 ATRNL1Q5VV63 1379 aa19.46■□□□□ 0.71
CTDSP1-209ENST00000488627 ZBTB48P10074 688 aaPredicted RBP19.46■□□□□ 0.71
CTDSP1-209ENST00000488627 MAP3K10Q02779 954 aa19.46■□□□□ 0.71
CTDSP1-209ENST00000488627 SAGE1Q9NXZ1 904 aa19.46■□□□□ 0.71
CTDSP1-209ENST00000488627 ZNF112Q9UJU3 913 aa19.46■□□□□ 0.71
CTDSP1-209ENST00000488627 DDTLA6NHG4 134 aaPredicted RBP19.45■□□□□ 0.7
CTDSP1-209ENST00000488627 TRPA1O75762 1119 aa19.45■□□□□ 0.7
CTDSP1-209ENST00000488627 DCAF15Q66K64 600 aa19.45■□□□□ 0.7
CTDSP1-209ENST00000488627 CNKSR2Q8WXI2 1034 aa19.45■□□□□ 0.7
CTDSP1-209ENST00000488627 BCL11AQ9H165 835 aa19.45■□□□□ 0.7
CTDSP1-209ENST00000488627 ELP3Q9H9T3 547 aa19.45■□□□□ 0.7
CTDSP1-209ENST00000488627 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.45■□□□□ 0.7
CTDSP1-209ENST00000488627 IDH1O75874 414 aaKnown RBP19.44■□□□□ 0.7
CTDSP1-209ENST00000488627 ATP5JP18859 108 aa19.44■□□□□ 0.7
CTDSP1-209ENST00000488627 CYP7A1P22680 504 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms