RNA–Protein interactions for RNA: ENST00000487674.1

PRKCB-208, Transcript of protein kinase C beta, humanhuman

TSL 2

Gene PRKCB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-208ENST00000487674 E9PSI1 815 aa10.73□□□□□ -0.69
PRKCB-208ENST00000487674 IGF2BP3O00425 579 aaKnown RBP eCLIP10.73□□□□□ -0.69
PRKCB-208ENST00000487674 USP2O75604 605 aaPredicted RBP10.73□□□□□ -0.69
PRKCB-208ENST00000487674 CRKP46108 304 aa10.73□□□□□ -0.69
PRKCB-208ENST00000487674 METTL24Q5JXM2 366 aa10.73□□□□□ -0.69
PRKCB-208ENST00000487674 FBXO33Q7Z6M2 555 aa10.73□□□□□ -0.69
PRKCB-208ENST00000487674 VPS37DQ86XT2 251 aa10.73□□□□□ -0.69
PRKCB-208ENST00000487674 DZIP1LQ8IYY4 767 aaKnown RBP10.73□□□□□ -0.69
PRKCB-208ENST00000487674 VGLL2Q8N8G2 317 aa10.73□□□□□ -0.69
PRKCB-208ENST00000487674 TBC1D22AQ8WUA7 517 aa10.73□□□□□ -0.69
PRKCB-208ENST00000487674 R3HDMLQ9H3Y0 253 aa10.73□□□□□ -0.69
PRKCB-208ENST00000487674 KIF16BQ96L93 1317 aa10.73□□□□□ -0.69
PRKCB-208ENST00000487674 PDE8BO95263 885 aa10.72□□□□□ -0.69
PRKCB-208ENST00000487674 TNNI2P48788 182 aa10.72□□□□□ -0.69
PRKCB-208ENST00000487674 HDLBPQ00341 1268 aaKnown RBP10.72□□□□□ -0.69
PRKCB-208ENST00000487674 LRRC24Q50LG9 513 aa10.72□□□□□ -0.69
PRKCB-208ENST00000487674 CAVIN4Q5BKX8 364 aa10.72□□□□□ -0.69
PRKCB-208ENST00000487674 OTUD7BQ6GQQ9 843 aa10.72□□□□□ -0.69
PRKCB-208ENST00000487674 TEPSINQ96N21 525 aa10.72□□□□□ -0.69
PRKCB-208ENST00000487674 TDRD3Q9H7E2 651 aaKnown RBP10.72□□□□□ -0.69
PRKCB-208ENST00000487674 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.72□□□□□ -0.69
PRKCB-208ENST00000487674 BOLA1Q9Y3E2 137 aa10.72□□□□□ -0.69
PRKCB-208ENST00000487674 TESPA1A2RU30 521 aaPredicted RBP10.71□□□□□ -0.69
PRKCB-208ENST00000487674 FAM205CA6NFA0 338 aa10.71□□□□□ -0.69
PRKCB-208ENST00000487674 MAST3O60307 1309 aa10.71□□□□□ -0.69
PRKCB-208ENST00000487674 FRAT2O75474 233 aaPredicted RBP10.71□□□□□ -0.69
PRKCB-208ENST00000487674 GJA5P36382 358 aa10.71□□□□□ -0.69
PRKCB-208ENST00000487674 CHAF1AQ13111 956 aaPredicted RBP10.71□□□□□ -0.69
PRKCB-208ENST00000487674 PUM3Q15397 648 aaKnown RBP10.71□□□□□ -0.69
PRKCB-208ENST00000487674 RBBP6Q7Z6E9 1792 aaKnown RBP10.71□□□□□ -0.69
PRKCB-208ENST00000487674 SSH1Q8WYL5 1049 aa10.71□□□□□ -0.69
PRKCB-208ENST00000487674 TEKT1Q969V4 418 aa10.71□□□□□ -0.69
PRKCB-208ENST00000487674 OPTNQ96CV9 577 aa10.71□□□□□ -0.69
PRKCB-208ENST00000487674 HS3ST6Q96QI5 342 aa10.71□□□□□ -0.69
PRKCB-208ENST00000487674 IQSEC3Q9UPP2 1182 aaPredicted RBP10.71□□□□□ -0.69
PRKCB-208ENST00000487674 RPAP1Q9BWH6 1393 aaPredicted RBP10.7□□□□□ -0.7
PRKCB-208ENST00000487674 TCP10L2B9ZVM9 353 aa10.7□□□□□ -0.7
PRKCB-208ENST00000487674 IFIT1P09914 478 aaKnown RBP10.7□□□□□ -0.7
PRKCB-208ENST00000487674 CRHR2Q13324 411 aa10.7□□□□□ -0.7
PRKCB-208ENST00000487674 VGLL4Q14135 290 aa10.7□□□□□ -0.7
PRKCB-208ENST00000487674 GRIK5Q16478 980 aa10.7□□□□□ -0.7
PRKCB-208ENST00000487674 OTOP1Q7RTM1 612 aa10.7□□□□□ -0.7
PRKCB-208ENST00000487674 KLHDC4Q8TBB5 520 aa10.7□□□□□ -0.7
PRKCB-208ENST00000487674 ERO1AQ96HE7 468 aa10.7□□□□□ -0.7
PRKCB-208ENST00000487674 TMEM39BQ9GZU3 492 aa10.7□□□□□ -0.7
PRKCB-208ENST00000487674 USP44Q9H0E7 712 aa10.7□□□□□ -0.7
PRKCB-208ENST00000487674 ELP3Q9H9T3 547 aa10.7□□□□□ -0.7
PRKCB-208ENST00000487674 TMOD2Q9NZR1 351 aa10.7□□□□□ -0.7
PRKCB-208ENST00000487674 SUGT1Q9Y2Z0 365 aa10.7□□□□□ -0.7
PRKCB-208ENST00000487674 TRIM17Q9Y577 477 aa10.7□□□□□ -0.7
PRKCB-208ENST00000487674 FGFR2P21802 821 aa10.69□□□□□ -0.7
PRKCB-208ENST00000487674 BCAMP50895 628 aa10.69□□□□□ -0.7
PRKCB-208ENST00000487674 SLFN5Q08AF3 891 aa10.69□□□□□ -0.7
PRKCB-208ENST00000487674 ALDH1L2Q3SY69 923 aa10.69□□□□□ -0.7
PRKCB-208ENST00000487674 PRPF38BQ5VTL8 546 aaKnown RBP10.69□□□□□ -0.7
PRKCB-208ENST00000487674 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.69□□□□□ -0.7
PRKCB-208ENST00000487674 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.69□□□□□ -0.7
PRKCB-208ENST00000487674 ZDHHC15Q96MV8 337 aa10.69□□□□□ -0.7
PRKCB-208ENST00000487674 MRIQ9BWK5 157 aa10.69□□□□□ -0.7
PRKCB-208ENST00000487674 CSADQ9Y600 493 aa10.69□□□□□ -0.7
PRKCB-208ENST00000487674 EYA2O00167 538 aa10.68□□□□□ -0.7
PRKCB-208ENST00000487674 SLC5A1P13866 664 aa10.68□□□□□ -0.7
PRKCB-208ENST00000487674 RFX5P48382 616 aaPredicted RBP10.68□□□□□ -0.7
PRKCB-208ENST00000487674 MAP3K9P80192 1104 aa10.68□□□□□ -0.7
PRKCB-208ENST00000487674 FKBP1CQ5VVH2 108 aa10.68□□□□□ -0.7
PRKCB-208ENST00000487674 FAM83AQ86UY5 434 aa10.68□□□□□ -0.7
PRKCB-208ENST00000487674 HOOK2Q96ED9 719 aa10.68□□□□□ -0.7
PRKCB-208ENST00000487674 MS4A4AQ96JQ5 239 aa10.68□□□□□ -0.7
PRKCB-208ENST00000487674 PTPN18Q99952 460 aa10.68□□□□□ -0.7
PRKCB-208ENST00000487674 KRTAP3-3Q9BYR6 98 aa10.68□□□□□ -0.7
PRKCB-208ENST00000487674 KRTAP3-2Q9BYR7 98 aa10.68□□□□□ -0.7
PRKCB-208ENST00000487674 SMC4Q9NTJ3 1288 aa10.68□□□□□ -0.7
PRKCB-208ENST00000487674 CCL15-CCL14A0A0B4J2E2 113 aa10.67□□□□□ -0.7
PRKCB-208ENST00000487674 SPDYE5A6NIY4 337 aa10.67□□□□□ -0.7
PRKCB-208ENST00000487674 HOXB3P14651 431 aaPredicted RBP10.67□□□□□ -0.7
PRKCB-208ENST00000487674 GTF2A2P52657 109 aa10.67□□□□□ -0.7
PRKCB-208ENST00000487674 CACNB3P54284 484 aa10.67□□□□□ -0.7
PRKCB-208ENST00000487674 SP3Q02447 781 aa10.67□□□□□ -0.7
PRKCB-208ENST00000487674 CCL15Q16663 113 aa10.67□□□□□ -0.7
PRKCB-208ENST00000487674 APOBEC3HQ6NTF7 200 aaKnown RBP10.67□□□□□ -0.7
PRKCB-208ENST00000487674 HHIPL2Q6UWX4 724 aa10.67□□□□□ -0.7
PRKCB-208ENST00000487674 WDR66Q8TBY9 1149 aa10.67□□□□□ -0.7
PRKCB-208ENST00000487674 CD99L2Q8TCZ2 262 aa10.67□□□□□ -0.7
PRKCB-208ENST00000487674 BRI3BPQ8WY22 251 aa10.67□□□□□ -0.7
PRKCB-208ENST00000487674 LPIN2Q92539 896 aa10.67□□□□□ -0.7
PRKCB-208ENST00000487674 PTPN22Q9Y2R2 807 aa10.67□□□□□ -0.7
PRKCB-208ENST00000487674 HTTP42858 3142 aa10.67□□□□□ -0.7
PRKCB-208ENST00000487674 CIAO1O76071 339 aa10.66□□□□□ -0.7
PRKCB-208ENST00000487674 CT47B1P0C2W7 299 aaPredicted RBP10.66□□□□□ -0.7
PRKCB-208ENST00000487674 UBTFL1P0CB47 393 aaPredicted RBP10.66□□□□□ -0.7
PRKCB-208ENST00000487674 DCAF15Q66K64 600 aa10.66□□□□□ -0.7
PRKCB-208ENST00000487674 INTS3Q68E01 1043 aaKnown RBP10.66□□□□□ -0.7
PRKCB-208ENST00000487674 ATG9AQ7Z3C6 839 aa10.66□□□□□ -0.7
PRKCB-208ENST00000487674 WRNIP1Q96S55 665 aa10.66□□□□□ -0.7
PRKCB-208ENST00000487674 EFCC1Q9HA90 598 aa10.66□□□□□ -0.7
PRKCB-208ENST00000487674 SNCAIPQ9Y6H5 919 aa10.66□□□□□ -0.7
PRKCB-208ENST00000487674 WDHD1O75717 1129 aaPredicted RBP10.65□□□□□ -0.7
PRKCB-208ENST00000487674 TAF1CQ15572 869 aaPredicted RBP10.65□□□□□ -0.7
PRKCB-208ENST00000487674 ERO1BQ86YB8 467 aa10.65□□□□□ -0.7
PRKCB-208ENST00000487674 FAM43AQ8N2R8 423 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms