RNA–Protein interactions for RNA: ENST00000487445.6

GCA-210, Transcript of grancalcin, humanhuman

TSL 5

Gene GCA, Length 1,808 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCA-210ENST00000487445 VIL1P09327 827 aaKnown RBP17.28■□□□□ 0.36
GCA-210ENST00000487445 ADCK5Q3MIX3 580 aa17.28■□□□□ 0.36
GCA-210ENST00000487445 CIAPIN1Q6FI81 312 aa17.28■□□□□ 0.36
GCA-210ENST00000487445 JAKMIP1Q96N16 626 aaKnown RBP17.28■□□□□ 0.36
GCA-210ENST00000487445 UPF3BQ9BZI7 483 aaKnown RBP17.28■□□□□ 0.36
GCA-210ENST00000487445 CRKP46108 304 aa17.28■□□□□ 0.36
GCA-210ENST00000487445 KCNB2Q92953 911 aa17.28■□□□□ 0.36
GCA-210ENST00000487445 DOCK2Q92608 1830 aa17.27■□□□□ 0.36
GCA-210ENST00000487445 GAKO14976 1311 aa17.27■□□□□ 0.36
GCA-210ENST00000487445 USP5P45974 858 aa17.27■□□□□ 0.36
GCA-210ENST00000487445 NEK4P51957 841 aa17.27■□□□□ 0.36
GCA-210ENST00000487445 PPP4CP60510 307 aa17.27■□□□□ 0.36
GCA-210ENST00000487445 GPR162Q16538 588 aa17.27■□□□□ 0.36
GCA-210ENST00000487445 DDRGK1Q96HY6 314 aa17.27■□□□□ 0.36
GCA-210ENST00000487445 MYO5AQ9Y4I1 1855 aaKnown RBP17.27■□□□□ 0.35
GCA-210ENST00000487445 BRCA1P38398 1863 aaKnown RBP17.26■□□□□ 0.35
GCA-210ENST00000487445 MYO3BQ8WXR4 1341 aa17.26■□□□□ 0.35
GCA-210ENST00000487445 LMNB1P20700 586 aa17.26■□□□□ 0.35
GCA-210ENST00000487445 CASTP20810 708 aaKnown RBP17.26■□□□□ 0.35
GCA-210ENST00000487445 EIF6P56537 245 aaKnown RBP17.26■□□□□ 0.35
GCA-210ENST00000487445 TNIP1Q15025 636 aa17.26■□□□□ 0.35
GCA-210ENST00000487445 ALX1Q15699 326 aa17.26■□□□□ 0.35
GCA-210ENST00000487445 HHIPL2Q6UWX4 724 aa17.26■□□□□ 0.35
GCA-210ENST00000487445 TGFBRAP1Q8WUH2 860 aa17.26■□□□□ 0.35
GCA-210ENST00000487445 CPA1P15085 419 aa17.26■□□□□ 0.35
GCA-210ENST00000487445 TEX11Q8IYF3 940 aa17.26■□□□□ 0.35
GCA-210ENST00000487445 OGFOD1Q8N543 542 aa17.26■□□□□ 0.35
GCA-210ENST00000487445 PCDHAC2Q9Y5I4 1007 aa17.26■□□□□ 0.35
GCA-210ENST00000487445 MINDY4BA8MYZ0 360 aa17.25■□□□□ 0.35
GCA-210ENST00000487445 PLCG2P16885 1265 aa17.25■□□□□ 0.35
GCA-210ENST00000487445 PSMA5P28066 241 aa17.25■□□□□ 0.35
GCA-210ENST00000487445 KRT32Q14532 448 aa17.25■□□□□ 0.35
GCA-210ENST00000487445 TSGA10IPQ3SY00 556 aa17.25■□□□□ 0.35
GCA-210ENST00000487445 CERS3Q8IU89 383 aa17.25■□□□□ 0.35
GCA-210ENST00000487445 STK11IPQ8N1F8 1099 aa17.25■□□□□ 0.35
GCA-210ENST00000487445 USP40Q9NVE5 1235 aa17.25■□□□□ 0.35
GCA-210ENST00000487445 GJA3Q9Y6H8 435 aa17.25■□□□□ 0.35
GCA-210ENST00000487445 CHD4Q14839 1912 aa17.25■□□□□ 0.35
GCA-210ENST00000487445 MYH13Q9UKX3 1938 aa17.25■□□□□ 0.35
GCA-210ENST00000487445 RPAP1Q9BWH6 1393 aaPredicted RBP17.25■□□□□ 0.35
GCA-210ENST00000487445 RHBDL3P58872 404 aa17.24■□□□□ 0.35
GCA-210ENST00000487445 SLC4A8Q2Y0W8 1093 aa17.24■□□□□ 0.35
GCA-210ENST00000487445 MAPKAPK5Q8IW41 473 aa17.24■□□□□ 0.35
GCA-210ENST00000487445 IL17RAQ96F46 866 aa17.24■□□□□ 0.35
GCA-210ENST00000487445 IPO9Q96P70 1041 aaKnown RBP17.24■□□□□ 0.35
GCA-210ENST00000487445 DCP1AQ9NPI6 582 aaPredicted RBP17.24■□□□□ 0.35
GCA-210ENST00000487445 ATP8A2Q9NTI2 1148 aa17.24■□□□□ 0.35
GCA-210ENST00000487445 MCM9Q9NXL9 1143 aa17.24■□□□□ 0.35
GCA-210ENST00000487445 SERPINA10Q9UK55 444 aa17.24■□□□□ 0.35
GCA-210ENST00000487445 HDAC9Q9UKV0 1011 aa17.24■□□□□ 0.35
GCA-210ENST00000487445 E7EWF7 191 aa17.24■□□□□ 0.35
GCA-210ENST00000487445 FZD9O00144 591 aa17.24■□□□□ 0.35
GCA-210ENST00000487445 ST18O60284 1047 aa17.24■□□□□ 0.35
GCA-210ENST00000487445 USP17L8P0C7I0 530 aa17.24■□□□□ 0.35
GCA-210ENST00000487445 SLC4A3P48751 1232 aa17.24■□□□□ 0.35
GCA-210ENST00000487445 HDLBPQ00341 1268 aaKnown RBP17.24■□□□□ 0.35
GCA-210ENST00000487445 CFAP100Q494V2 611 aa17.24■□□□□ 0.35
GCA-210ENST00000487445 APOBEC3HQ6NTF7 200 aaKnown RBP17.24■□□□□ 0.35
GCA-210ENST00000487445 STOX1Q6ZVD7 989 aa17.24■□□□□ 0.35
GCA-210ENST00000487445 AGBL3Q8NEM8 1001 aa17.24■□□□□ 0.35
GCA-210ENST00000487445 ZDHHC15Q96MV8 337 aa17.24■□□□□ 0.35
GCA-210ENST00000487445 NEK1Q96PY6 1258 aa17.24■□□□□ 0.35
GCA-210ENST00000487445 GMLQ99445 158 aa17.24■□□□□ 0.35
GCA-210ENST00000487445 MRIQ9BWK5 157 aa17.24■□□□□ 0.35
GCA-210ENST00000487445 DAXXQ9UER7 740 aaPredicted RBP17.24■□□□□ 0.35
GCA-210ENST00000487445 CYP46A1Q9Y6A2 500 aa17.24■□□□□ 0.35
GCA-210ENST00000487445 USP17L12C9JPN9 530 aa17.23■□□□□ 0.35
GCA-210ENST00000487445 USP17L21D6R901 530 aa17.23■□□□□ 0.35
GCA-210ENST00000487445 CTDSPL2Q05D32 466 aa17.23■□□□□ 0.35
GCA-210ENST00000487445 PICALMQ13492 652 aa17.23■□□□□ 0.35
GCA-210ENST00000487445 BECN1Q14457 450 aa17.23■□□□□ 0.35
GCA-210ENST00000487445 GIMAP6Q6P9H5 292 aa17.23■□□□□ 0.35
GCA-210ENST00000487445 BLOC1S2Q6QNY1 142 aa17.23■□□□□ 0.35
GCA-210ENST00000487445 ZMYM6O95789 1325 aa17.22■□□□□ 0.35
GCA-210ENST00000487445 CYP2D7A0A087X1C5 515 aa17.22■□□□□ 0.35
GCA-210ENST00000487445 CD2BP2O95400 341 aaKnown RBP17.22■□□□□ 0.35
GCA-210ENST00000487445 PPARAQ07869 468 aa17.22■□□□□ 0.35
GCA-210ENST00000487445 COL9A3Q14050 684 aaPredicted RBP17.22■□□□□ 0.35
GCA-210ENST00000487445 CDC42EP5Q6NZY7 148 aa17.22■□□□□ 0.35
GCA-210ENST00000487445 CTR9Q6PD62 1173 aa17.22■□□□□ 0.35
GCA-210ENST00000487445 TBC1D10CQ8IV04 446 aa17.22■□□□□ 0.35
GCA-210ENST00000487445 HSCBQ8IWL3 235 aa17.22■□□□□ 0.35
GCA-210ENST00000487445 TBC1D2Q9BYX2 928 aa17.22■□□□□ 0.35
GCA-210ENST00000487445 TM6SF1Q9BZW5 370 aa17.22■□□□□ 0.35
GCA-210ENST00000487445 ZSWIM6Q9HCJ5 1215 aa17.22■□□□□ 0.35
GCA-210ENST00000487445 RNF181Q9P0P0 153 aa17.22■□□□□ 0.35
GCA-210ENST00000487445 MYH7P12883 1935 aa17.22■□□□□ 0.35
GCA-210ENST00000487445 SCN9AQ15858 1988 aa17.22■□□□□ 0.35
GCA-210ENST00000487445 NOL8Q76FK4 1167 aaKnown RBP17.21■□□□□ 0.35
GCA-210ENST00000487445 RUFY3Q7L099 469 aa17.21■□□□□ 0.35
GCA-210ENST00000487445 TCEANC2Q96MN5 208 aa17.21■□□□□ 0.35
GCA-210ENST00000487445 NBPF3Q9H094 633 aa17.21■□□□□ 0.35
GCA-210ENST00000487445 INCENPQ9NQS7 918 aa17.21■□□□□ 0.35
GCA-210ENST00000487445 SAP30BPQ9UHR5 308 aaKnown RBP17.21■□□□□ 0.35
GCA-210ENST00000487445 FER1L6Q2WGJ9 1857 aa17.21■□□□□ 0.35
GCA-210ENST00000487445 ZNF541Q9H0D2 1346 aa17.21■□□□□ 0.35
GCA-210ENST00000487445 DLGAP5Q15398 846 aa17.21■□□□□ 0.35
GCA-210ENST00000487445 TOMM22Q9NS69 142 aa17.21■□□□□ 0.35
GCA-210ENST00000487445 PDRG1Q9NUG6 133 aa17.21■□□□□ 0.35
GCA-210ENST00000487445 SMIM22K7EJ46 135 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms