RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 CYP7A1P22680 504 aa13.77□□□□□ -0.21
NUP50-216ENST00000486184 NBPF9Q3BBW0 867 aa13.77□□□□□ -0.21
NUP50-216ENST00000486184 TTC22Q5TAA0 569 aa13.77□□□□□ -0.21
NUP50-216ENST00000486184 FOCADQ5VW36 1801 aa13.77□□□□□ -0.21
NUP50-216ENST00000486184 ZC3H15Q8WU90 426 aaKnown RBP13.77□□□□□ -0.21
NUP50-216ENST00000486184 DCPSQ96C86 337 aaKnown RBP13.77□□□□□ -0.21
NUP50-216ENST00000486184 DAGLAQ9Y4D2 1042 aa13.77□□□□□ -0.21
NUP50-216ENST00000486184 GTF3C3Q9Y5Q9 886 aa13.77□□□□□ -0.21
NUP50-216ENST00000486184 KIF3CO14782 793 aa13.76□□□□□ -0.21
NUP50-216ENST00000486184 ZFYP08048 801 aaPredicted RBP13.76□□□□□ -0.21
NUP50-216ENST00000486184 PDE6AP16499 860 aa13.76□□□□□ -0.21
NUP50-216ENST00000486184 BTDP43251 543 aa13.76□□□□□ -0.21
NUP50-216ENST00000486184 ANGEL2Q5VTE6 544 aaKnown RBP13.76□□□□□ -0.21
NUP50-216ENST00000486184 PRMT6Q96LA8 375 aaPredicted RBP13.76□□□□□ -0.21
NUP50-216ENST00000486184 VEZTQ9HBM0 779 aa13.76□□□□□ -0.21
NUP50-216ENST00000486184 GGA3Q9NZ52 723 aa13.76□□□□□ -0.21
NUP50-216ENST00000486184 GAKO14976 1311 aa13.75□□□□□ -0.21
NUP50-216ENST00000486184 ZNF532Q9HCE3 1301 aa13.75□□□□□ -0.21
NUP50-216ENST00000486184 PLCG2P16885 1265 aa13.75□□□□□ -0.21
NUP50-216ENST00000486184 HIRAP54198 1017 aaPredicted RBP13.75□□□□□ -0.21
NUP50-216ENST00000486184 TNFAIP1Q13829 316 aa13.75□□□□□ -0.21
NUP50-216ENST00000486184 CHADLQ6NUI6 762 aa13.75□□□□□ -0.21
NUP50-216ENST00000486184 CERS3Q8IU89 383 aa13.75□□□□□ -0.21
NUP50-216ENST00000486184 APOBEC3FQ8IUX4 373 aaKnown RBP13.75□□□□□ -0.21
NUP50-216ENST00000486184 SULF1Q8IWU6 871 aa13.75□□□□□ -0.21
NUP50-216ENST00000486184 FAM163AQ96GL9 167 aaPredicted RBP13.75□□□□□ -0.21
NUP50-216ENST00000486184 TDRD3Q9H7E2 651 aaKnown RBP13.75□□□□□ -0.21
NUP50-216ENST00000486184 PCDHAC2Q9Y5I4 1007 aa13.75□□□□□ -0.21
NUP50-216ENST00000486184 TRPM7Q96QT4 1865 aa13.75□□□□□ -0.21
NUP50-216ENST00000486184 NAV1Q8NEY1 1877 aa13.74□□□□□ -0.21
NUP50-216ENST00000486184 RFX7Q2KHR2 1363 aa13.74□□□□□ -0.21
NUP50-216ENST00000486184 PITPNM2Q9BZ72 1349 aa13.74□□□□□ -0.21
NUP50-216ENST00000486184 GPR75-ASB3A0A0A6YYF3 556 aa13.74□□□□□ -0.21
NUP50-216ENST00000486184 CLRN2A0PK11 232 aa13.74□□□□□ -0.21
NUP50-216ENST00000486184 RNF113AO15541 343 aaKnown RBP13.74□□□□□ -0.21
NUP50-216ENST00000486184 TOMM70O94826 608 aa13.74□□□□□ -0.21
NUP50-216ENST00000486184 POTEIP0CG38 1075 aa13.74□□□□□ -0.21
NUP50-216ENST00000486184 POTEJP0CG39 1038 aa13.74□□□□□ -0.21
NUP50-216ENST00000486184 ADD2P35612 726 aa13.74□□□□□ -0.21
NUP50-216ENST00000486184 TNNI2P48788 182 aa13.74□□□□□ -0.21
NUP50-216ENST00000486184 UBE3CQ15386 1083 aa13.74□□□□□ -0.21
NUP50-216ENST00000486184 SMC1BQ8NDV3 1235 aa13.74□□□□□ -0.21
NUP50-216ENST00000486184 ZBED3Q96IU2 234 aaPredicted RBP13.74□□□□□ -0.21
NUP50-216ENST00000486184 USP40Q9NVE5 1235 aa13.74□□□□□ -0.21
NUP50-216ENST00000486184 AATFQ9NY61 560 aaKnown RBP eCLIP13.74□□□□□ -0.21
NUP50-216ENST00000486184 ZNF70Q9UC06 446 aaPredicted RBP13.74□□□□□ -0.21
NUP50-216ENST00000486184 MYH1P12882 1939 aa13.74□□□□□ -0.21
NUP50-216ENST00000486184 MAGEB6P1A0A0J9YX57 407 aa13.73□□□□□ -0.21
NUP50-216ENST00000486184 HIP1O00291 1037 aa13.73□□□□□ -0.21
NUP50-216ENST00000486184 SPDYE2Q495Y8 402 aa13.73□□□□□ -0.21
NUP50-216ENST00000486184 MAP1SQ66K74 1059 aaPredicted RBP13.73□□□□□ -0.21
NUP50-216ENST00000486184 APOBEC3HQ6NTF7 200 aaKnown RBP13.73□□□□□ -0.21
NUP50-216ENST00000486184 SKAP1Q86WV1 359 aa13.73□□□□□ -0.21
NUP50-216ENST00000486184 MIGA1Q8NAN2 632 aa13.73□□□□□ -0.21
NUP50-216ENST00000486184 RBM46Q8TBY0 533 aaKnown RBP13.73□□□□□ -0.21
NUP50-216ENST00000486184 ZNF384Q8TF68 577 aa13.73□□□□□ -0.21
NUP50-216ENST00000486184 ASTN2O75129 1339 aaPredicted RBP13.72□□□□□ -0.21
NUP50-216ENST00000486184 TCP10L2B9ZVM9 353 aa13.72□□□□□ -0.21
NUP50-216ENST00000486184 CDC42EP5Q6NZY7 148 aa13.72□□□□□ -0.21
NUP50-216ENST00000486184 CDC37L1Q7L3B6 337 aa13.72□□□□□ -0.21
NUP50-216ENST00000486184 KRT26Q7Z3Y9 468 aa13.72□□□□□ -0.21
NUP50-216ENST00000486184 ADGRA1Q86SQ6 560 aa13.72□□□□□ -0.21
NUP50-216ENST00000486184 TICAM2Q86XR7 235 aa13.72□□□□□ -0.21
NUP50-216ENST00000486184 TEX11Q8IYF3 940 aa13.72□□□□□ -0.21
NUP50-216ENST00000486184 APPBP2Q92624 585 aa13.72□□□□□ -0.21
NUP50-216ENST00000486184 AIDAQ96BJ3 306 aa13.72□□□□□ -0.21
NUP50-216ENST00000486184 DIAPH3Q9NSV4 1193 aa13.72□□□□□ -0.21
NUP50-216ENST00000486184 TCRBV5S4A2TA0A5A2 114 aa13.71□□□□□ -0.21
NUP50-216ENST00000486184 GSPT1P15170 499 aaKnown RBP13.71□□□□□ -0.21
NUP50-216ENST00000486184 SDSP20132 328 aa13.71□□□□□ -0.21
NUP50-216ENST00000486184 CACNB3P54284 484 aa13.71□□□□□ -0.21
NUP50-216ENST00000486184 CRNKL1Q9BZJ0 848 aaKnown RBP13.71□□□□□ -0.21
NUP50-216ENST00000486184 PGAP2Q9UHJ9 254 aa13.71□□□□□ -0.21
NUP50-216ENST00000486184 MBD4O95243 580 aa13.7□□□□□ -0.22
NUP50-216ENST00000486184 USP5P45974 858 aa13.7□□□□□ -0.22
NUP50-216ENST00000486184 PPP4CP60510 307 aa13.7□□□□□ -0.22
NUP50-216ENST00000486184 DYNLL1P63167 89 aaKnown RBP13.7□□□□□ -0.22
NUP50-216ENST00000486184 FSTL1Q12841 308 aa13.7□□□□□ -0.22
NUP50-216ENST00000486184 PICALMQ13492 652 aa13.7□□□□□ -0.22
NUP50-216ENST00000486184 BMP2KLQ5H9B9 411 aa13.7□□□□□ -0.22
NUP50-216ENST00000486184 FKBP1CQ5VVH2 108 aa13.7□□□□□ -0.22
NUP50-216ENST00000486184 USP48Q86UV5 1035 aa13.7□□□□□ -0.22
NUP50-216ENST00000486184 SH3RF3Q8TEJ3 882 aaPredicted RBP13.7□□□□□ -0.22
NUP50-216ENST00000486184 DDRGK1Q96HY6 314 aa13.7□□□□□ -0.22
NUP50-216ENST00000486184 GLIS2Q9BZE0 524 aaPredicted RBP13.7□□□□□ -0.22
NUP50-216ENST00000486184 PPP2R3BQ9Y5P8 575 aa13.7□□□□□ -0.22
NUP50-216ENST00000486184 BAZ2AQ9UIF9 1905 aaKnown RBP13.7□□□□□ -0.22
NUP50-216ENST00000486184 MYH8P13535 1937 aa13.69□□□□□ -0.22
NUP50-216ENST00000486184 ADM5C9JUS6 153 aa13.69□□□□□ -0.22
NUP50-216ENST00000486184 NF2P35240 595 aa13.69□□□□□ -0.22
NUP50-216ENST00000486184 SLFNL1Q499Z3 407 aa13.69□□□□□ -0.22
NUP50-216ENST00000486184 DEFB129Q9H1M3 183 aa13.69□□□□□ -0.22
NUP50-216ENST00000486184 ARMT1Q9H993 441 aa13.69□□□□□ -0.22
NUP50-216ENST00000486184 SCAF8Q9UPN6 1271 aaKnown RBP13.69□□□□□ -0.22
NUP50-216ENST00000486184 LAMB1P07942 1786 aa13.68□□□□□ -0.22
NUP50-216ENST00000486184 ENTPD3O75355 529 aa13.68□□□□□ -0.22
NUP50-216ENST00000486184 CHGBP05060 677 aa13.68□□□□□ -0.22
NUP50-216ENST00000486184 MFAP1P55081 439 aaKnown RBP13.68□□□□□ -0.22
NUP50-216ENST00000486184 RHBDL3P58872 404 aa13.68□□□□□ -0.22
NUP50-216ENST00000486184 TCP10Q12799 353 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms