RNA–Protein interactions for RNA: ENST00000485790.1

SCAF4-206, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 2

Gene SCAF4, Length 1,282 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-206ENST00000485790 AKAP11Q9UKA4 1901 aa17.06■□□□□ 0.32
SCAF4-206ENST00000485790 SPDYE5A6NIY4 337 aa17.05■□□□□ 0.32
SCAF4-206ENST00000485790 SRGAP3O43295 1099 aa17.05■□□□□ 0.32
SCAF4-206ENST00000485790 KIF22Q14807 665 aa17.05■□□□□ 0.32
SCAF4-206ENST00000485790 MIGA2Q7L4E1 593 aa17.05■□□□□ 0.32
SCAF4-206ENST00000485790 BRI3BPQ8WY22 251 aa17.05■□□□□ 0.32
SCAF4-206ENST00000485790 PTPN22Q9Y2R2 807 aa17.05■□□□□ 0.32
SCAF4-206ENST00000485790 TIMM10P62072 90 aa17.04■□□□□ 0.32
SCAF4-206ENST00000485790 PPATQ06203 517 aa17.04■□□□□ 0.32
SCAF4-206ENST00000485790 TCP10Q12799 353 aa17.04■□□□□ 0.32
SCAF4-206ENST00000485790 GORABQ5T7V8 394 aa17.04■□□□□ 0.32
SCAF4-206ENST00000485790 CDC42EP5Q6NZY7 148 aa17.04■□□□□ 0.32
SCAF4-206ENST00000485790 CD99L2Q8TCZ2 262 aa17.04■□□□□ 0.32
SCAF4-206ENST00000485790 CNKSR2Q8WXI2 1034 aa17.04■□□□□ 0.32
SCAF4-206ENST00000485790 MEIS3Q99687 375 aa17.04■□□□□ 0.32
SCAF4-206ENST00000485790 ZCCHC17Q9NP64 241 aaKnown RBP17.04■□□□□ 0.32
SCAF4-206ENST00000485790 PA2G4Q9UQ80 394 aaKnown RBP17.04■□□□□ 0.32
SCAF4-206ENST00000485790 DAGLAQ9Y4D2 1042 aa17.04■□□□□ 0.32
SCAF4-206ENST00000485790 SALL1Q9NSC2 1324 aa17.03■□□□□ 0.32
SCAF4-206ENST00000485790 ZBTB22O15209 634 aa17.03■□□□□ 0.32
SCAF4-206ENST00000485790 PPIL2Q13356 520 aa17.03■□□□□ 0.32
SCAF4-206ENST00000485790 MVPQ14764 893 aaKnown RBP17.03■□□□□ 0.32
SCAF4-206ENST00000485790 CCDC102BQ68D86 513 aa17.03■□□□□ 0.32
SCAF4-206ENST00000485790 NBPF11Q86T75 865 aa17.03■□□□□ 0.32
SCAF4-206ENST00000485790 FRAT1Q92837 279 aaPredicted RBP17.03■□□□□ 0.32
SCAF4-206ENST00000485790 NEUROD6Q96NK8 337 aa17.03■□□□□ 0.32
SCAF4-206ENST00000485790 ABCF2Q9UG63 623 aa17.03■□□□□ 0.32
SCAF4-206ENST00000485790 IRF6O14896 467 aa17.02■□□□□ 0.32
SCAF4-206ENST00000485790 GNAI2P04899 355 aa17.02■□□□□ 0.32
SCAF4-206ENST00000485790 PRDX5P30044 214 aa17.02■□□□□ 0.32
SCAF4-206ENST00000485790 PHKA1P46020 1223 aa17.02■□□□□ 0.32
SCAF4-206ENST00000485790 G3BP1Q13283 466 aaKnown RBP eCLIP17.02■□□□□ 0.32
SCAF4-206ENST00000485790 DIXDC1Q155Q3 683 aa17.02■□□□□ 0.32
SCAF4-206ENST00000485790 DZIP1Q86YF9 867 aaKnown RBP17.02■□□□□ 0.32
SCAF4-206ENST00000485790 SNCAIPQ9Y6H5 919 aa17.02■□□□□ 0.32
SCAF4-206ENST00000485790 ATF7IPQ6VMQ6 1270 aa17.01■□□□□ 0.31
SCAF4-206ENST00000485790 ZSCAN29Q8IWY8 852 aaPredicted RBP17.01■□□□□ 0.31
SCAF4-206ENST00000485790 FAM43AQ8N2R8 423 aa17.01■□□□□ 0.31
SCAF4-206ENST00000485790 TMEM106CQ9BVX2 250 aa17.01■□□□□ 0.31
SCAF4-206ENST00000485790 TLR2O60603 784 aa17■□□□□ 0.31
SCAF4-206ENST00000485790 ENTPD3O75355 529 aa17■□□□□ 0.31
SCAF4-206ENST00000485790 GNRH1P01148 92 aa17■□□□□ 0.31
SCAF4-206ENST00000485790 LDHCP07864 332 aa17■□□□□ 0.31
SCAF4-206ENST00000485790 TFCP2Q12800 502 aa17■□□□□ 0.31
SCAF4-206ENST00000485790 MTX1Q13505 466 aa17■□□□□ 0.31
SCAF4-206ENST00000485790 FAM163AQ96GL9 167 aaPredicted RBP17■□□□□ 0.31
SCAF4-206ENST00000485790 XAGE2Q96GT9 111 aa17■□□□□ 0.31
SCAF4-206ENST00000485790 ZNF112Q9UJU3 913 aa17■□□□□ 0.31
SCAF4-206ENST00000485790 ZNF646O15015 1829 aaPredicted RBP16.99■□□□□ 0.31
SCAF4-206ENST00000485790 A0A1B0GUL7 405 aa16.99■□□□□ 0.31
SCAF4-206ENST00000485790 BTBD19C9JJ37 291 aa16.99■□□□□ 0.31
SCAF4-206ENST00000485790 ADORA1P30542 326 aa16.99■□□□□ 0.31
SCAF4-206ENST00000485790 GSTO1P78417 241 aa16.99■□□□□ 0.31
SCAF4-206ENST00000485790 ERICH6Q7L0X2 663 aa16.99■□□□□ 0.31
SCAF4-206ENST00000485790 IDI2Q9BXS1 227 aa16.99■□□□□ 0.31
SCAF4-206ENST00000485790 PDS5AQ29RF7 1337 aaKnown RBP16.98■□□□□ 0.31
SCAF4-206ENST00000485790 CXCL11O14625 94 aa16.98■□□□□ 0.31
SCAF4-206ENST00000485790 INPP5BP32019 993 aa16.98■□□□□ 0.31
SCAF4-206ENST00000485790 NFIAQ12857 509 aa16.98■□□□□ 0.31
SCAF4-206ENST00000485790 PRPF38BQ5VTL8 546 aaKnown RBP16.98■□□□□ 0.31
SCAF4-206ENST00000485790 PICK1Q9NRD5 415 aa16.98■□□□□ 0.31
SCAF4-206ENST00000485790 FAM198AQ9UFP1 575 aa16.98■□□□□ 0.31
SCAF4-206ENST00000485790 RPAP1Q9BWH6 1393 aaPredicted RBP16.98■□□□□ 0.31
SCAF4-206ENST00000485790 BCAR3O75815 825 aa16.97■□□□□ 0.31
SCAF4-206ENST00000485790 MAP4K4O95819 1239 aaPredicted RBP16.97■□□□□ 0.31
SCAF4-206ENST00000485790 TRIM27P14373 513 aa16.97■□□□□ 0.31
SCAF4-206ENST00000485790 HOXD10P28358 340 aa16.97■□□□□ 0.31
SCAF4-206ENST00000485790 RGS3P49796 1198 aa16.97■□□□□ 0.31
SCAF4-206ENST00000485790 PRMT2P55345 433 aa16.97■□□□□ 0.31
SCAF4-206ENST00000485790 RASGRF1Q13972 1273 aa16.97■□□□□ 0.31
SCAF4-206ENST00000485790 ZKSCAN2Q63HK3 967 aa16.97■□□□□ 0.31
SCAF4-206ENST00000485790 ANKRD23Q86SG2 305 aa16.97■□□□□ 0.31
SCAF4-206ENST00000485790 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.97■□□□□ 0.31
SCAF4-206ENST00000485790 CLUAP1Q96AJ1 413 aa16.97■□□□□ 0.31
SCAF4-206ENST00000485790 ARMC5Q96C12 935 aa16.97■□□□□ 0.31
SCAF4-206ENST00000485790 PDHXO00330 501 aa16.96■□□□□ 0.31
SCAF4-206ENST00000485790 UQCRFS1P1P0C7P4 283 aa16.96■□□□□ 0.31
SCAF4-206ENST00000485790 SLC9C1Q4G0N8 1177 aa16.96■□□□□ 0.31
SCAF4-206ENST00000485790 NOL9Q5SY16 702 aaKnown RBP16.96■□□□□ 0.31
SCAF4-206ENST00000485790 FASTKD5Q7L8L6 764 aaKnown RBP16.96■□□□□ 0.31
SCAF4-206ENST00000485790 SPATA5Q8NB90 893 aa16.96■□□□□ 0.31
SCAF4-206ENST00000485790 KCNH4Q9UQ05 1017 aa16.96■□□□□ 0.31
SCAF4-206ENST00000485790 LACTBP83111 547 aaPredicted RBP16.95■□□□□ 0.3
SCAF4-206ENST00000485790 ZFPM1Q8IX07 1006 aa16.95■□□□□ 0.3
SCAF4-206ENST00000485790 ZHX2Q9Y6X8 837 aa16.95■□□□□ 0.3
SCAF4-206ENST00000485790 GAKO14976 1311 aa16.95■□□□□ 0.3
SCAF4-206ENST00000485790 GPR75-ASB3A0A0A6YYF3 556 aa16.94■□□□□ 0.3
SCAF4-206ENST00000485790 CTNND1O60716 968 aaKnown RBP16.94■□□□□ 0.3
SCAF4-206ENST00000485790 BTDP43251 543 aa16.94■□□□□ 0.3
SCAF4-206ENST00000485790 MECOMQ03112 1051 aa16.94■□□□□ 0.3
SCAF4-206ENST00000485790 OS9Q13438 667 aaPredicted RBP16.94■□□□□ 0.3
SCAF4-206ENST00000485790 SLC4A8Q2Y0W8 1093 aa16.94■□□□□ 0.3
SCAF4-206ENST00000485790 NOL10Q9BSC4 688 aaKnown RBP16.94■□□□□ 0.3
SCAF4-206ENST00000485790 RAI14Q9P0K7 980 aa16.94■□□□□ 0.3
SCAF4-206ENST00000485790 LRP2BPQ9P2M1 347 aa16.94■□□□□ 0.3
SCAF4-206ENST00000485790 SLC34A2O95436 690 aa16.93■□□□□ 0.3
SCAF4-206ENST00000485790 FMNL1O95466 1100 aaPredicted RBP16.93■□□□□ 0.3
SCAF4-206ENST00000485790 MAP3K10Q02779 954 aa16.93■□□□□ 0.3
SCAF4-206ENST00000485790 PICALMQ13492 652 aa16.93■□□□□ 0.3
SCAF4-206ENST00000485790 CCDC158Q5M9N0 1113 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms