RNA–Protein interactions for RNA: ENST00000484186.5

NUP50-215, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-215ENST00000484186 A0A1B0GUL7 405 aa11.68□□□□□ -0.54
NUP50-215ENST00000484186 GTF2A2P52657 109 aa11.68□□□□□ -0.54
NUP50-215ENST00000484186 DCAF15Q66K64 600 aa11.68□□□□□ -0.54
NUP50-215ENST00000484186 CDC42EP5Q6NZY7 148 aa11.68□□□□□ -0.54
NUP50-215ENST00000484186 ZGPATQ8N5A5 531 aaKnown RBP11.68□□□□□ -0.54
NUP50-215ENST00000484186 CNKSR2Q8WXI2 1034 aa11.68□□□□□ -0.54
NUP50-215ENST00000484186 XAGE2Q96GT9 111 aa11.68□□□□□ -0.54
NUP50-215ENST00000484186 USP40Q9NVE5 1235 aa11.68□□□□□ -0.54
NUP50-215ENST00000484186 HPS5Q9UPZ3 1129 aa11.68□□□□□ -0.54
NUP50-215ENST00000484186 RPAP1Q9BWH6 1393 aaPredicted RBP11.67□□□□□ -0.54
NUP50-215ENST00000484186 TCP10Q12799 353 aa11.67□□□□□ -0.54
NUP50-215ENST00000484186 G3BP1Q13283 466 aaKnown RBP eCLIP11.67□□□□□ -0.54
NUP50-215ENST00000484186 CRHR2Q13324 411 aa11.67□□□□□ -0.54
NUP50-215ENST00000484186 RASGRF1Q13972 1273 aa11.67□□□□□ -0.54
NUP50-215ENST00000484186 MVPQ14764 893 aaKnown RBP11.67□□□□□ -0.54
NUP50-215ENST00000484186 FBXO46Q6PJ61 603 aaPredicted RBP11.67□□□□□ -0.54
NUP50-215ENST00000484186 TMEM57Q8N5G2 664 aa11.67□□□□□ -0.54
NUP50-215ENST00000484186 ZKSCAN4Q969J2 545 aaPredicted RBP11.67□□□□□ -0.54
NUP50-215ENST00000484186 NEUROD6Q96NK8 337 aa11.67□□□□□ -0.54
NUP50-215ENST00000484186 WRNIP1Q96S55 665 aa11.67□□□□□ -0.54
NUP50-215ENST00000484186 ZNF341Q9BYN7 854 aa11.67□□□□□ -0.54
NUP50-215ENST00000484186 MYH13Q9UKX3 1938 aa11.66□□□□□ -0.54
NUP50-215ENST00000484186 PDS5AQ29RF7 1337 aaKnown RBP11.66□□□□□ -0.54
NUP50-215ENST00000484186 CCL15-CCL14A0A0B4J2E2 113 aa11.66□□□□□ -0.54
NUP50-215ENST00000484186 PNMA6EA0A0J9YXQ4 647 aa11.66□□□□□ -0.54
NUP50-215ENST00000484186 SPDYE5A6NIY4 337 aa11.66□□□□□ -0.54
NUP50-215ENST00000484186 SOX10P56693 466 aa11.66□□□□□ -0.54
NUP50-215ENST00000484186 NFIAQ12857 509 aa11.66□□□□□ -0.54
NUP50-215ENST00000484186 CCL15Q16663 113 aa11.66□□□□□ -0.54
NUP50-215ENST00000484186 SPTY2D1Q68D10 685 aaPredicted RBP11.66□□□□□ -0.54
NUP50-215ENST00000484186 MIGA2Q7L4E1 593 aa11.66□□□□□ -0.54
NUP50-215ENST00000484186 ERO1BQ86YB8 467 aa11.66□□□□□ -0.54
NUP50-215ENST00000484186 SLF2Q8IX21 1173 aa11.66□□□□□ -0.54
NUP50-215ENST00000484186 BRI3BPQ8WY22 251 aa11.66□□□□□ -0.54
NUP50-215ENST00000484186 OTUD5Q96G74 571 aa11.66□□□□□ -0.54
NUP50-215ENST00000484186 FAM198AQ9UFP1 575 aa11.66□□□□□ -0.54
NUP50-215ENST00000484186 ABCF2Q9UG63 623 aa11.66□□□□□ -0.54
NUP50-215ENST00000484186 SNCAIPQ9Y6H5 919 aa11.66□□□□□ -0.54
NUP50-215ENST00000484186 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.66□□□□□ -0.54
NUP50-215ENST00000484186 OTOFQ9HC10 1997 aa11.65□□□□□ -0.54
NUP50-215ENST00000484186 LAMB1P07942 1786 aa11.65□□□□□ -0.54
NUP50-215ENST00000484186 GORABQ5T7V8 394 aa11.65□□□□□ -0.54
NUP50-215ENST00000484186 DZIP1Q86YF9 867 aaKnown RBP11.65□□□□□ -0.54
NUP50-215ENST00000484186 FAM163AQ96GL9 167 aaPredicted RBP11.65□□□□□ -0.54
NUP50-215ENST00000484186 ERO1AQ96HE7 468 aa11.65□□□□□ -0.54
NUP50-215ENST00000484186 ZFYVE28Q9HCC9 887 aa11.65□□□□□ -0.54
NUP50-215ENST00000484186 ZNF112Q9UJU3 913 aa11.65□□□□□ -0.54
NUP50-215ENST00000484186 TRIM17Q9Y577 477 aa11.65□□□□□ -0.54
NUP50-215ENST00000484186 GAKO14976 1311 aa11.64□□□□□ -0.55
NUP50-215ENST00000484186 IRF6O14896 467 aa11.64□□□□□ -0.55
NUP50-215ENST00000484186 CETPP11597 493 aa11.64□□□□□ -0.55
NUP50-215ENST00000484186 INPP5BP32019 993 aa11.64□□□□□ -0.55
NUP50-215ENST00000484186 ATP8B2P98198 1209 aa11.64□□□□□ -0.55
NUP50-215ENST00000484186 SP3Q02447 781 aa11.64□□□□□ -0.55
NUP50-215ENST00000484186 PPATQ06203 517 aa11.64□□□□□ -0.55
NUP50-215ENST00000484186 PPIL2Q13356 520 aa11.64□□□□□ -0.55
NUP50-215ENST00000484186 SNAPC2Q13487 334 aa11.64□□□□□ -0.55
NUP50-215ENST00000484186 POLA2Q14181 598 aa11.64□□□□□ -0.55
NUP50-215ENST00000484186 TAF1CQ15572 869 aaPredicted RBP11.64□□□□□ -0.55
NUP50-215ENST00000484186 ERICH6Q7L0X2 663 aa11.64□□□□□ -0.55
NUP50-215ENST00000484186 OTOP1Q7RTM1 612 aa11.64□□□□□ -0.55
NUP50-215ENST00000484186 FAM43AQ8N2R8 423 aa11.64□□□□□ -0.55
NUP50-215ENST00000484186 CD99L2Q8TCZ2 262 aa11.64□□□□□ -0.55
NUP50-215ENST00000484186 IDI2Q9BXS1 227 aa11.64□□□□□ -0.55
NUP50-215ENST00000484186 HMG20BQ9P0W2 317 aa11.64□□□□□ -0.55
NUP50-215ENST00000484186 ENTPD3O75355 529 aa11.63□□□□□ -0.55
NUP50-215ENST00000484186 ARID4AP29374 1257 aaPredicted RBP11.63□□□□□ -0.55
NUP50-215ENST00000484186 MECOMQ03112 1051 aa11.63□□□□□ -0.55
NUP50-215ENST00000484186 ZFPM1Q8IX07 1006 aa11.63□□□□□ -0.55
NUP50-215ENST00000484186 FTSJ3Q8IY81 847 aaKnown RBP11.63□□□□□ -0.55
NUP50-215ENST00000484186 SPATA5Q8NB90 893 aa11.63□□□□□ -0.55
NUP50-215ENST00000484186 SSH3Q8TE77 659 aa11.63□□□□□ -0.55
NUP50-215ENST00000484186 BTBD19C9JJ37 291 aa11.62□□□□□ -0.55
NUP50-215ENST00000484186 ZBTB7BO15156 539 aaPredicted RBP11.62□□□□□ -0.55
NUP50-215ENST00000484186 WDHD1O75717 1129 aaPredicted RBP11.62□□□□□ -0.55
NUP50-215ENST00000484186 BTDP43251 543 aa11.62□□□□□ -0.55
NUP50-215ENST00000484186 RGS3P49796 1198 aa11.62□□□□□ -0.55
NUP50-215ENST00000484186 NOL9Q5SY16 702 aaKnown RBP11.62□□□□□ -0.55
NUP50-215ENST00000484186 ITPRIPQ8IWB1 547 aa11.62□□□□□ -0.55
NUP50-215ENST00000484186 EFCC1Q9HA90 598 aa11.62□□□□□ -0.55
NUP50-215ENST00000484186 ZCCHC17Q9NP64 241 aaKnown RBP11.62□□□□□ -0.55
NUP50-215ENST00000484186 GPR108Q9NPR9 543 aa11.62□□□□□ -0.55
NUP50-215ENST00000484186 PTPN22Q9Y2R2 807 aa11.62□□□□□ -0.55
NUP50-215ENST00000484186 MROH7-TTC4A0A0A0MT08 1334 aa11.61□□□□□ -0.55
NUP50-215ENST00000484186 ZBED9Q6R2W3 1325 aa11.61□□□□□ -0.55
NUP50-215ENST00000484186 GPR75-ASB3A0A0A6YYF3 556 aa11.61□□□□□ -0.55
NUP50-215ENST00000484186 SURF6O75683 361 aaKnown RBP11.61□□□□□ -0.55
NUP50-215ENST00000484186 LDHCP07864 332 aa11.61□□□□□ -0.55
NUP50-215ENST00000484186 UQCRFS1P1P0C7P4 283 aa11.61□□□□□ -0.55
NUP50-215ENST00000484186 RLBP1P12271 317 aa11.61□□□□□ -0.55
NUP50-215ENST00000484186 MCAMP43121 646 aa11.61□□□□□ -0.55
NUP50-215ENST00000484186 GSTO1P78417 241 aa11.61□□□□□ -0.55
NUP50-215ENST00000484186 MAP3K10Q02779 954 aa11.61□□□□□ -0.55
NUP50-215ENST00000484186 OS9Q13438 667 aaPredicted RBP11.61□□□□□ -0.55
NUP50-215ENST00000484186 ARHGEF6Q15052 776 aa11.61□□□□□ -0.55
NUP50-215ENST00000484186 PI16Q6UXB8 463 aa11.61□□□□□ -0.55
NUP50-215ENST00000484186 TBC1D9Q6ZT07 1266 aa11.61□□□□□ -0.55
NUP50-215ENST00000484186 SH3BP5LQ7L8J4 393 aa11.61□□□□□ -0.55
NUP50-215ENST00000484186 ZNF384Q8TF68 577 aa11.61□□□□□ -0.55
NUP50-215ENST00000484186 NSUN4Q96CB9 384 aaKnown RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms