RNA–Protein interactions for RNA: ENST00000481690.2

GPCPD1-206, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 3

Gene GPCPD1, Length 819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-206ENST00000481690 HOOK2Q96ED9 719 aa27.48■■□□□ 1.99
GPCPD1-206ENST00000481690 XAGE2Q96GT9 111 aa27.48■■□□□ 1.99
GPCPD1-206ENST00000481690 NEUROD6Q96NK8 337 aa27.48■■□□□ 1.99
GPCPD1-206ENST00000481690 FKTNO75072 461 aa27.47■■□□□ 1.99
GPCPD1-206ENST00000481690 MVPQ14764 893 aaKnown RBP27.47■■□□□ 1.99
GPCPD1-206ENST00000481690 NOM1Q5C9Z4 860 aaKnown RBP27.47■■□□□ 1.99
GPCPD1-206ENST00000481690 CDC42EP5Q6NZY7 148 aa27.47■■□□□ 1.99
GPCPD1-206ENST00000481690 ZGPATQ8N5A5 531 aaKnown RBP27.47■■□□□ 1.99
GPCPD1-206ENST00000481690 TCP10Q12799 353 aa27.46■■□□□ 1.99
GPCPD1-206ENST00000481690 G3BP1Q13283 466 aaKnown RBP eCLIP27.46■■□□□ 1.99
GPCPD1-206ENST00000481690 OTUD7BQ6GQQ9 843 aa27.46■■□□□ 1.99
GPCPD1-206ENST00000481690 OTUD5Q96G74 571 aa27.46■■□□□ 1.99
GPCPD1-206ENST00000481690 WRNIP1Q96S55 665 aa27.46■■□□□ 1.99
GPCPD1-206ENST00000481690 ABCF2Q9UG63 623 aa27.46■■□□□ 1.99
GPCPD1-206ENST00000481690 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP27.46■■□□□ 1.99
GPCPD1-206ENST00000481690 ZBED9Q6R2W3 1325 aa27.45■■□□□ 1.99
GPCPD1-206ENST00000481690 DCAF15Q66K64 600 aa27.45■■□□□ 1.98
GPCPD1-206ENST00000481690 DZIP1Q86YF9 867 aaKnown RBP27.45■■□□□ 1.98
GPCPD1-206ENST00000481690 USP40Q9NVE5 1235 aa27.45■■□□□ 1.98
GPCPD1-206ENST00000481690 GORABQ5T7V8 394 aa27.44■■□□□ 1.98
GPCPD1-206ENST00000481690 ITPRIPQ8IWB1 547 aa27.44■■□□□ 1.98
GPCPD1-206ENST00000481690 FAM151AQ8WW52 585 aa27.44■■□□□ 1.98
GPCPD1-206ENST00000481690 DOCK2Q92608 1830 aa27.44■■□□□ 1.98
GPCPD1-206ENST00000481690 NFIAQ12857 509 aa27.43■■□□□ 1.98
GPCPD1-206ENST00000481690 PKN2Q16513 984 aaKnown RBP27.43■■□□□ 1.98
GPCPD1-206ENST00000481690 MIGA2Q7L4E1 593 aa27.43■■□□□ 1.98
GPCPD1-206ENST00000481690 C1orf115Q9H7X2 142 aa27.43■■□□□ 1.98
GPCPD1-206ENST00000481690 PDS5AQ29RF7 1337 aaKnown RBP27.42■■□□□ 1.98
GPCPD1-206ENST00000481690 ZBTB22O15209 634 aa27.42■■□□□ 1.98
GPCPD1-206ENST00000481690 ZKSCAN4Q969J2 545 aaPredicted RBP27.42■■□□□ 1.98
GPCPD1-206ENST00000481690 PTPN18Q99952 460 aa27.42■■□□□ 1.98
GPCPD1-206ENST00000481690 ZNF341Q9BYN7 854 aa27.42■■□□□ 1.98
GPCPD1-206ENST00000481690 SNCAIPQ9Y6H5 919 aa27.42■■□□□ 1.98
GPCPD1-206ENST00000481690 TESPA1A2RU30 521 aaPredicted RBP27.41■■□□□ 1.98
GPCPD1-206ENST00000481690 CRHR2Q13324 411 aa27.41■■□□□ 1.98
GPCPD1-206ENST00000481690 SPTY2D1Q68D10 685 aaPredicted RBP27.41■■□□□ 1.98
GPCPD1-206ENST00000481690 MS4A4AQ96JQ5 239 aa27.41■■□□□ 1.98
GPCPD1-206ENST00000481690 HPS5Q9UPZ3 1129 aa27.41■■□□□ 1.98
GPCPD1-206ENST00000481690 CCL15-CCL14A0A0B4J2E2 113 aa27.4■■□□□ 1.98
GPCPD1-206ENST00000481690 SPDYE5A6NIY4 337 aa27.4■■□□□ 1.98
GPCPD1-206ENST00000481690 RLBP1P12271 317 aa27.4■■□□□ 1.98
GPCPD1-206ENST00000481690 GTF2A2P52657 109 aa27.4■■□□□ 1.98
GPCPD1-206ENST00000481690 MLLT1Q03111 559 aaPredicted RBP27.4■■□□□ 1.98
GPCPD1-206ENST00000481690 OS9Q13438 667 aaPredicted RBP27.4■■□□□ 1.98
GPCPD1-206ENST00000481690 CCL15Q16663 113 aa27.4■■□□□ 1.98
GPCPD1-206ENST00000481690 FAM198AQ9UFP1 575 aa27.4■■□□□ 1.98
GPCPD1-206ENST00000481690 RGS19P49795 217 aa27.39■■□□□ 1.98
GPCPD1-206ENST00000481690 SOX10P56693 466 aa27.39■■□□□ 1.98
GPCPD1-206ENST00000481690 SLF2Q8IX21 1173 aa27.39■■□□□ 1.98
GPCPD1-206ENST00000481690 BRI3BPQ8WY22 251 aa27.39■■□□□ 1.98
GPCPD1-206ENST00000481690 GAKO14976 1311 aa27.39■■□□□ 1.97
GPCPD1-206ENST00000481690 POLA2Q14181 598 aa27.38■■□□□ 1.97
GPCPD1-206ENST00000481690 PI16Q6UXB8 463 aa27.38■■□□□ 1.97
GPCPD1-206ENST00000481690 ERICH6Q7L0X2 663 aa27.38■■□□□ 1.97
GPCPD1-206ENST00000481690 ERO1BQ86YB8 467 aa27.38■■□□□ 1.97
GPCPD1-206ENST00000481690 HMG20BQ9P0W2 317 aa27.38■■□□□ 1.97
GPCPD1-206ENST00000481690 INPP5BP32019 993 aa27.37■■□□□ 1.97
GPCPD1-206ENST00000481690 ATP8B2P98198 1209 aa27.37■■□□□ 1.97
GPCPD1-206ENST00000481690 SPATA5Q8NB90 893 aa27.37■■□□□ 1.97
GPCPD1-206ENST00000481690 BTDP43251 543 aa27.36■■□□□ 1.97
GPCPD1-206ENST00000481690 RGS3P49796 1198 aa27.36■■□□□ 1.97
GPCPD1-206ENST00000481690 FBXO46Q6PJ61 603 aaPredicted RBP27.36■■□□□ 1.97
GPCPD1-206ENST00000481690 ZFPM1Q8IX07 1006 aa27.36■■□□□ 1.97
GPCPD1-206ENST00000481690 SSH3Q8TE77 659 aa27.36■■□□□ 1.97
GPCPD1-206ENST00000481690 MROH7-TTC4A0A0A0MT08 1334 aa27.36■■□□□ 1.97
GPCPD1-206ENST00000481690 SURF6O75683 361 aaKnown RBP27.35■■□□□ 1.97
GPCPD1-206ENST00000481690 ARID4AP29374 1257 aaPredicted RBP27.35■■□□□ 1.97
GPCPD1-206ENST00000481690 MECOMQ03112 1051 aa27.35■■□□□ 1.97
GPCPD1-206ENST00000481690 TAF1CQ15572 869 aaPredicted RBP27.35■■□□□ 1.97
GPCPD1-206ENST00000481690 TRIM17Q9Y577 477 aa27.35■■□□□ 1.97
GPCPD1-206ENST00000481690 TBC1D9Q6ZT07 1266 aa27.34■■□□□ 1.97
GPCPD1-206ENST00000481690 ZSCAN29Q8IWY8 852 aaPredicted RBP27.34■■□□□ 1.97
GPCPD1-206ENST00000481690 FAM43AQ8N2R8 423 aa27.34■■□□□ 1.97
GPCPD1-206ENST00000481690 CD99L2Q8TCZ2 262 aa27.34■■□□□ 1.97
GPCPD1-206ENST00000481690 ERO1AQ96HE7 468 aa27.34■■□□□ 1.97
GPCPD1-206ENST00000481690 RFX7Q2KHR2 1363 aa27.34■■□□□ 1.97
GPCPD1-206ENST00000481690 IRF6O14896 467 aa27.33■■□□□ 1.97
GPCPD1-206ENST00000481690 ZBTB7BO15156 539 aaPredicted RBP27.33■■□□□ 1.97
GPCPD1-206ENST00000481690 UQCRFS1P1P0C7P4 283 aa27.33■■□□□ 1.97
GPCPD1-206ENST00000481690 CETPP11597 493 aa27.33■■□□□ 1.97
GPCPD1-206ENST00000481690 MCAMP43121 646 aa27.33■■□□□ 1.97
GPCPD1-206ENST00000481690 PPIL2Q13356 520 aa27.33■■□□□ 1.97
GPCPD1-206ENST00000481690 SNAPC2Q13487 334 aa27.33■■□□□ 1.97
GPCPD1-206ENST00000481690 PICALMQ13492 652 aa27.33■■□□□ 1.97
GPCPD1-206ENST00000481690 TNNI3KQ59H18 835 aa27.33■■□□□ 1.97
GPCPD1-206ENST00000481690 FAM163AQ96GL9 167 aaPredicted RBP27.33■■□□□ 1.97
GPCPD1-206ENST00000481690 IDI2Q9BXS1 227 aa27.33■■□□□ 1.97
GPCPD1-206ENST00000481690 RAI14Q9P0K7 980 aa27.33■■□□□ 1.97
GPCPD1-206ENST00000481690 FPGT-TNNI3KV9GXZ4 949 aa27.33■■□□□ 1.97
GPCPD1-206ENST00000481690 ENTPD3O75355 529 aa27.32■■□□□ 1.96
GPCPD1-206ENST00000481690 TTC39AQ5SRH9 613 aa27.32■■□□□ 1.96
GPCPD1-206ENST00000481690 ZFYVE28Q9HCC9 887 aa27.32■■□□□ 1.96
GPCPD1-206ENST00000481690 MAST2Q6P0Q8 1798 aa27.32■■□□□ 1.96
GPCPD1-206ENST00000481690 GSTO1P78417 241 aa27.31■■□□□ 1.96
GPCPD1-206ENST00000481690 SP3Q02447 781 aa27.31■■□□□ 1.96
GPCPD1-206ENST00000481690 PPATQ06203 517 aa27.31■■□□□ 1.96
GPCPD1-206ENST00000481690 OTOP1Q7RTM1 612 aa27.31■■□□□ 1.96
GPCPD1-206ENST00000481690 PANK1Q8TE04 598 aa27.31■■□□□ 1.96
GPCPD1-206ENST00000481690 DBNDD2Q9BQY9 259 aa27.31■■□□□ 1.96
GPCPD1-206ENST00000481690 GPR108Q9NPR9 543 aa27.31■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms