RNA–Protein interactions for RNA: ENST00000479712.1

UPF3A-205, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-205ENST00000479712 CPB1P15086 417 aa8.05□□□□□ -1.12
UPF3A-205ENST00000479712 DNAJA1P31689 397 aaKnown RBP8.05□□□□□ -1.12
UPF3A-205ENST00000479712 MAP3K11Q16584 847 aa8.05□□□□□ -1.12
UPF3A-205ENST00000479712 FAM35AQ86V20 835 aa8.05□□□□□ -1.12
UPF3A-205ENST00000479712 RELL1Q8IUW5 271 aa8.05□□□□□ -1.12
UPF3A-205ENST00000479712 TNFRSF25Q93038 417 aa8.05□□□□□ -1.12
UPF3A-205ENST00000479712 ZNF576Q9H609 170 aa8.05□□□□□ -1.12
UPF3A-205ENST00000479712 SLC6A14Q9UN76 642 aa8.05□□□□□ -1.12
UPF3A-205ENST00000479712 IGF1RP08069 1367 aa8.05□□□□□ -1.12
UPF3A-205ENST00000479712 CELA3AP09093 270 aa8.04□□□□□ -1.12
UPF3A-205ENST00000479712 GBP2P32456 591 aaPredicted RBP8.04□□□□□ -1.12
UPF3A-205ENST00000479712 RBM6P78332 1123 aaKnown RBP8.04□□□□□ -1.12
UPF3A-205ENST00000479712 ARID5AQ03989 594 aa8.04□□□□□ -1.12
UPF3A-205ENST00000479712 PAK2Q13177 524 aa8.04□□□□□ -1.12
UPF3A-205ENST00000479712 CEP135Q66GS9 1140 aa8.04□□□□□ -1.12
UPF3A-205ENST00000479712 MICALL1Q8N3F8 863 aa8.04□□□□□ -1.12
UPF3A-205ENST00000479712 ZMYM3Q14202 1370 aa8.04□□□□□ -1.12
UPF3A-205ENST00000479712 DIP2CQ9Y2E4 1556 aa8.03□□□□□ -1.12
UPF3A-205ENST00000479712 MINDY4BA8MYZ0 360 aa8.03□□□□□ -1.12
UPF3A-205ENST00000479712 ARAFP10398 606 aa8.03□□□□□ -1.12
UPF3A-205ENST00000479712 ATP2B1P20020 1258 aa8.03□□□□□ -1.12
UPF3A-205ENST00000479712 ADH6P28332 368 aa8.03□□□□□ -1.12
UPF3A-205ENST00000479712 ADH7P40394 386 aa8.03□□□□□ -1.12
UPF3A-205ENST00000479712 GAS6Q14393 721 aa8.03□□□□□ -1.12
UPF3A-205ENST00000479712 RPS26P11Q5JNZ5 115 aaPredicted RBP8.03□□□□□ -1.12
UPF3A-205ENST00000479712 VPS37DQ86XT2 251 aa8.03□□□□□ -1.12
UPF3A-205ENST00000479712 NPAS3Q8IXF0 933 aa8.03□□□□□ -1.12
UPF3A-205ENST00000479712 PLD4Q96BZ4 506 aa8.03□□□□□ -1.12
UPF3A-205ENST00000479712 TMEM74Q96NL1 305 aa8.03□□□□□ -1.12
UPF3A-205ENST00000479712 GMLQ99445 158 aa8.03□□□□□ -1.12
UPF3A-205ENST00000479712 POP1Q99575 1024 aaKnown RBP8.03□□□□□ -1.12
UPF3A-205ENST00000479712 SPON2Q9BUD6 331 aa8.03□□□□□ -1.12
UPF3A-205ENST00000479712 GPN3Q9UHW5 284 aaPredicted RBP8.03□□□□□ -1.12
UPF3A-205ENST00000479712 NPHP4O75161 1426 aaPredicted RBP8.03□□□□□ -1.12
UPF3A-205ENST00000479712 CNTLNQ9NXG0 1405 aa8.03□□□□□ -1.12
UPF3A-205ENST00000479712 BCL9LQ86UU0 1499 aa8.02□□□□□ -1.13
UPF3A-205ENST00000479712 GJA8P48165 433 aa8.02□□□□□ -1.13
UPF3A-205ENST00000479712 LIG3P49916 1009 aa8.02□□□□□ -1.13
UPF3A-205ENST00000479712 ELMSAN1Q6PJG2 1045 aa8.02□□□□□ -1.13
UPF3A-205ENST00000479712 KIAA0825Q8IV33 1275 aa8.02□□□□□ -1.13
UPF3A-205ENST00000479712 BSNDQ8WZ55 320 aa8.02□□□□□ -1.13
UPF3A-205ENST00000479712 IRF7Q92985 503 aa8.02□□□□□ -1.13
UPF3A-205ENST00000479712 GPRASP2Q96D09 838 aa8.02□□□□□ -1.13
UPF3A-205ENST00000479712 NECAB3Q96P71 396 aaPredicted RBP8.02□□□□□ -1.13
UPF3A-205ENST00000479712 MUC3BQ9H195 1237 aa8.02□□□□□ -1.13
UPF3A-205ENST00000479712 SEC31BQ9NQW1 1179 aa8.02□□□□□ -1.13
UPF3A-205ENST00000479712 NAGPAQ9UK23 515 aa8.02□□□□□ -1.13
UPF3A-205ENST00000479712 NSFL1CQ9UNZ2 370 aaKnown RBP8.02□□□□□ -1.13
UPF3A-205ENST00000479712 AGLP35573 1532 aa8.02□□□□□ -1.13
UPF3A-205ENST00000479712 SPATA31A6Q5VVP1 1343 aa8.02□□□□□ -1.13
UPF3A-205ENST00000479712 MROH2AA6NES4 1674 aa8.02□□□□□ -1.13
UPF3A-205ENST00000479712 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.01□□□□□ -1.13
UPF3A-205ENST00000479712 COL16A1Q07092 1604 aaPredicted RBP8.01□□□□□ -1.13
UPF3A-205ENST00000479712 ENC1O14682 589 aa8.01□□□□□ -1.13
UPF3A-205ENST00000479712 MAP2K3P46734 347 aa8.01□□□□□ -1.13
UPF3A-205ENST00000479712 FAAP100Q0VG06 881 aa8.01□□□□□ -1.13
UPF3A-205ENST00000479712 PERM1Q5SV97 790 aa8.01□□□□□ -1.13
UPF3A-205ENST00000479712 SMG9Q9H0W8 520 aaKnown RBP8.01□□□□□ -1.13
UPF3A-205ENST00000479712 CLEC4MQ9H2X3 399 aaPredicted RBP8.01□□□□□ -1.13
UPF3A-205ENST00000479712 MBIPQ9NS73 344 aa8.01□□□□□ -1.13
UPF3A-205ENST00000479712 ADAMTS1Q9UHI8 967 aa8.01□□□□□ -1.13
UPF3A-205ENST00000479712 KLF15Q9UIH9 416 aa8.01□□□□□ -1.13
UPF3A-205ENST00000479712 KDM5CP41229 1560 aa8.01□□□□□ -1.13
UPF3A-205ENST00000479712 A2ML1A8K2U0 1454 aa8□□□□□ -1.13
UPF3A-205ENST00000479712 CAMTA1Q9Y6Y1 1673 aa8□□□□□ -1.13
UPF3A-205ENST00000479712 ADARB2-AS1A8MUL3 147 aa8□□□□□ -1.13
UPF3A-205ENST00000479712 PTPRAP18433 802 aa8□□□□□ -1.13
UPF3A-205ENST00000479712 EIF4A3P38919 411 aaKnown RBP8□□□□□ -1.13
UPF3A-205ENST00000479712 TTBK2Q6IQ55 1244 aa8□□□□□ -1.13
UPF3A-205ENST00000479712 PHC3Q8NDX5 983 aa8□□□□□ -1.13
UPF3A-205ENST00000479712 RHOVQ96L33 236 aa8□□□□□ -1.13
UPF3A-205ENST00000479712 TLR6Q9Y2C9 796 aa8□□□□□ -1.13
UPF3A-205ENST00000479712 EP400Q96L91 3159 aa8□□□□□ -1.13
UPF3A-205ENST00000479712 ABCA6Q8N139 1617 aa8□□□□□ -1.13
UPF3A-205ENST00000479712 IQGAP1P46940 1657 aa7.99□□□□□ -1.13
UPF3A-205ENST00000479712 FAM177BA6PVY3 158 aa7.99□□□□□ -1.13
UPF3A-205ENST00000479712 NEURL1BA8MQ27 555 aa7.99□□□□□ -1.13
UPF3A-205ENST00000479712 GTF2F1P35269 517 aaKnown RBP eCLIP7.99□□□□□ -1.13
UPF3A-205ENST00000479712 ZNF157P51786 506 aaPredicted RBP7.99□□□□□ -1.13
UPF3A-205ENST00000479712 PPP2R3AQ06190 1150 aa7.99□□□□□ -1.13
UPF3A-205ENST00000479712 PCDH1Q08174 1060 aa7.99□□□□□ -1.13
UPF3A-205ENST00000479712 SUZ12Q15022 739 aaKnown RBP7.99□□□□□ -1.13
UPF3A-205ENST00000479712 FCHSD1Q86WN1 690 aa7.99□□□□□ -1.13
UPF3A-205ENST00000479712 RASGRP4Q8TDF6 673 aa7.99□□□□□ -1.13
UPF3A-205ENST00000479712 DHX38Q92620 1227 aaKnown RBP7.99□□□□□ -1.13
UPF3A-205ENST00000479712 LPIN3Q9BQK8 851 aa7.99□□□□□ -1.13
UPF3A-205ENST00000479712 LACRTQ9GZZ8 138 aa7.99□□□□□ -1.13
UPF3A-205ENST00000479712 TMEM39AQ9NV64 488 aa7.99□□□□□ -1.13
UPF3A-205ENST00000479712 FRRS1LQ9P0K9 344 aa7.99□□□□□ -1.13
UPF3A-205ENST00000479712 TRIM33Q9UPN9 1127 aa7.99□□□□□ -1.13
UPF3A-205ENST00000479712 CLTCQ00610 1675 aaKnown RBP7.98□□□□□ -1.13
UPF3A-205ENST00000479712 CARMIL1Q5VZK9 1371 aa7.98□□□□□ -1.13
UPF3A-205ENST00000479712 NWD1Q149M9 1564 aa7.98□□□□□ -1.13
UPF3A-205ENST00000479712 H3BM21 787 aa7.98□□□□□ -1.13
UPF3A-205ENST00000479712 PAGE1O75459 146 aa7.98□□□□□ -1.13
UPF3A-205ENST00000479712 ATF4P18848 351 aaPredicted RBP7.98□□□□□ -1.13
UPF3A-205ENST00000479712 FAM160A1Q05DH4 1040 aa7.98□□□□□ -1.13
UPF3A-205ENST00000479712 PCNX4Q63HM2 1172 aa7.98□□□□□ -1.13
UPF3A-205ENST00000479712 ANKLE2Q86XL3 938 aa7.98□□□□□ -1.13
UPF3A-205ENST00000479712 GPR161Q8N6U8 529 aaKnown RBP7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms