RNA–Protein interactions for RNA: ENST00000478909.5

CMSS1-203, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 5

Gene CMSS1, Length 753 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-203ENST00000478909 DDX21Q9NR30 783 aaKnown RBP eCLIP7.45□□□□□ -1.22
CMSS1-203ENST00000478909 ISY1Q9ULR0 285 aaKnown RBP7.45□□□□□ -1.22
CMSS1-203ENST00000478909 NOD1Q9Y239 953 aa7.45□□□□□ -1.22
CMSS1-203ENST00000478909 RGPD5Q99666 1765 aa7.45□□□□□ -1.22
CMSS1-203ENST00000478909 UTYO14607 1347 aa7.45□□□□□ -1.22
CMSS1-203ENST00000478909 SALL3Q9BXA9 1300 aa7.45□□□□□ -1.22
CMSS1-203ENST00000478909 USP42Q9H9J4 1324 aaKnown RBP7.45□□□□□ -1.22
CMSS1-203ENST00000478909 NHSL1Q5SYE7 1610 aa7.45□□□□□ -1.22
CMSS1-203ENST00000478909 ABCA3Q99758 1704 aa7.44□□□□□ -1.22
CMSS1-203ENST00000478909 STRCQ7RTU9 1775 aa7.44□□□□□ -1.22
CMSS1-203ENST00000478909 ERC2O15083 957 aa7.44□□□□□ -1.22
CMSS1-203ENST00000478909 LZTS3O60299 673 aaPredicted RBP7.44□□□□□ -1.22
CMSS1-203ENST00000478909 CSB-PGBD3P0DP91 1061 aa7.44□□□□□ -1.22
CMSS1-203ENST00000478909 MX1P20591 662 aa7.44□□□□□ -1.22
CMSS1-203ENST00000478909 MX2P20592 715 aa7.44□□□□□ -1.22
CMSS1-203ENST00000478909 PLA2G4AP47712 749 aa7.44□□□□□ -1.22
CMSS1-203ENST00000478909 PDE1AP54750 535 aa7.44□□□□□ -1.22
CMSS1-203ENST00000478909 BEND3Q5T5X7 828 aa7.44□□□□□ -1.22
CMSS1-203ENST00000478909 KSR2Q6VAB6 950 aa7.44□□□□□ -1.22
CMSS1-203ENST00000478909 DEPDC4Q8N2C3 294 aa7.44□□□□□ -1.22
CMSS1-203ENST00000478909 PGBD3Q8N328 593 aa7.44□□□□□ -1.22
CMSS1-203ENST00000478909 LINS1Q8NG48 757 aa7.44□□□□□ -1.22
CMSS1-203ENST00000478909 KIF1BPQ96EK5 621 aa7.44□□□□□ -1.22
CMSS1-203ENST00000478909 GPATCH3Q96I76 525 aa7.44□□□□□ -1.22
CMSS1-203ENST00000478909 USP44Q9H0E7 712 aa7.44□□□□□ -1.22
CMSS1-203ENST00000478909 SLC52A2Q9HAB3 445 aa7.44□□□□□ -1.22
CMSS1-203ENST00000478909 MIS18AQ9NYP9 233 aa7.44□□□□□ -1.22
CMSS1-203ENST00000478909 TTC41PQ6P2S7 1318 aa7.44□□□□□ -1.22
CMSS1-203ENST00000478909 PAPPAQ13219 1627 aa7.43□□□□□ -1.22
CMSS1-203ENST00000478909 USP17L5A8MUK1 530 aa7.43□□□□□ -1.22
CMSS1-203ENST00000478909 K7ELQ4 463 aaPredicted RBP7.43□□□□□ -1.22
CMSS1-203ENST00000478909 GSPT1P15170 499 aaKnown RBP7.43□□□□□ -1.22
CMSS1-203ENST00000478909 PHKG2P15735 406 aa7.43□□□□□ -1.22
CMSS1-203ENST00000478909 GTF2IP78347 998 aa7.43□□□□□ -1.22
CMSS1-203ENST00000478909 MAP3K10Q02779 954 aa7.43□□□□□ -1.22
CMSS1-203ENST00000478909 NEXNQ0ZGT2 675 aa7.43□□□□□ -1.22
CMSS1-203ENST00000478909 LBRQ14739 615 aaKnown RBP7.43□□□□□ -1.22
CMSS1-203ENST00000478909 MTFR1Q15390 333 aa7.43□□□□□ -1.22
CMSS1-203ENST00000478909 ZNF790Q6PG37 636 aa7.43□□□□□ -1.22
CMSS1-203ENST00000478909 ZNF295-AS1Q8N0V1 137 aa7.43□□□□□ -1.22
CMSS1-203ENST00000478909 USHBP1Q8N6Y0 703 aa7.43□□□□□ -1.22
CMSS1-203ENST00000478909 CFHR5Q9BXR6 569 aa7.43□□□□□ -1.22
CMSS1-203ENST00000478909 NIFKQ9BYG3 293 aaKnown RBP7.43□□□□□ -1.22
CMSS1-203ENST00000478909 CHPF2Q9P2E5 772 aa7.43□□□□□ -1.22
CMSS1-203ENST00000478909 IQSEC3Q9UPP2 1182 aaPredicted RBP7.43□□□□□ -1.22
CMSS1-203ENST00000478909 WDR17Q8IZU2 1322 aa7.43□□□□□ -1.22
CMSS1-203ENST00000478909 PCDH11XQ9BZA7 1347 aa7.43□□□□□ -1.22
CMSS1-203ENST00000478909 PCDH11YQ9BZA8 1340 aa7.43□□□□□ -1.22
CMSS1-203ENST00000478909 ADCY9O60503 1353 aa7.43□□□□□ -1.22
CMSS1-203ENST00000478909 UBR2Q8IWV8 1755 aa7.43□□□□□ -1.22
CMSS1-203ENST00000478909 KDM6AO15550 1401 aaPredicted RBP7.43□□□□□ -1.22
CMSS1-203ENST00000478909 MEGF6O75095 1541 aa7.42□□□□□ -1.22
CMSS1-203ENST00000478909 A6NJY4 79 aa7.42□□□□□ -1.22
CMSS1-203ENST00000478909 ERVV-2B6SEH9 535 aa7.42□□□□□ -1.22
CMSS1-203ENST00000478909 F6X3S4 739 aa7.42□□□□□ -1.22
CMSS1-203ENST00000478909 CDK2AP1O14519 115 aa7.42□□□□□ -1.22
CMSS1-203ENST00000478909 SNRPA1P09661 255 aaKnown RBP7.42□□□□□ -1.22
CMSS1-203ENST00000478909 SDSP20132 328 aa7.42□□□□□ -1.22
CMSS1-203ENST00000478909 DDIT3P35638 169 aa7.42□□□□□ -1.22
CMSS1-203ENST00000478909 DEKP35659 375 aaKnown RBP7.42□□□□□ -1.22
CMSS1-203ENST00000478909 EFHC2Q5JST6 749 aa7.42□□□□□ -1.22
CMSS1-203ENST00000478909 LARP1Q6PKG0 1096 aaKnown RBP7.42□□□□□ -1.22
CMSS1-203ENST00000478909 MPRIPQ6WCQ1 1025 aa7.42□□□□□ -1.22
CMSS1-203ENST00000478909 TTC5Q8N0Z6 440 aa7.42□□□□□ -1.22
CMSS1-203ENST00000478909 LRRC59Q96AG4 307 aaKnown RBP7.42□□□□□ -1.22
CMSS1-203ENST00000478909 ACDQ96AP0 544 aa7.42□□□□□ -1.22
CMSS1-203ENST00000478909 GBP4Q96PP9 640 aa7.42□□□□□ -1.22
CMSS1-203ENST00000478909 FMNL2Q96PY5 1086 aa7.42□□□□□ -1.22
CMSS1-203ENST00000478909 UCN2Q96RP3 112 aa7.42□□□□□ -1.22
CMSS1-203ENST00000478909 CRISPLD1Q9H336 500 aa7.42□□□□□ -1.22
CMSS1-203ENST00000478909 LGR6Q9HBX8 967 aa7.42□□□□□ -1.22
CMSS1-203ENST00000478909 CWC22Q9HCG8 908 aaKnown RBP7.42□□□□□ -1.22
CMSS1-203ENST00000478909 NLRP2Q9NX02 1062 aa7.42□□□□□ -1.22
CMSS1-203ENST00000478909 LRRFIP2Q9Y608 721 aaKnown RBP7.42□□□□□ -1.22
CMSS1-203ENST00000478909 USP3Q9Y6I4 520 aa7.42□□□□□ -1.22
CMSS1-203ENST00000478909 AK9Q5TCS8 1911 aa7.42□□□□□ -1.22
CMSS1-203ENST00000478909 LRP6O75581 1613 aa7.41□□□□□ -1.22
CMSS1-203ENST00000478909 PI4KAP2A4QPH2 592 aa7.41□□□□□ -1.22
CMSS1-203ENST00000478909 RNF225M0QZC1 329 aaPredicted RBP7.41□□□□□ -1.22
CMSS1-203ENST00000478909 HIP1O00291 1037 aa7.41□□□□□ -1.22
CMSS1-203ENST00000478909 PDIA4P13667 645 aaKnown RBP7.41□□□□□ -1.22
CMSS1-203ENST00000478909 ATP4AP20648 1035 aa7.41□□□□□ -1.22
CMSS1-203ENST00000478909 SKOR2Q2VWA4 1001 aaPredicted RBP7.41□□□□□ -1.22
CMSS1-203ENST00000478909 CLEC17AQ6ZS10 378 aa7.41□□□□□ -1.22
CMSS1-203ENST00000478909 BRINP3Q76B58 766 aa7.41□□□□□ -1.22
CMSS1-203ENST00000478909 PI4KAP1Q8N8J0 262 aa7.41□□□□□ -1.22
CMSS1-203ENST00000478909 USP26Q9BXU7 913 aa7.41□□□□□ -1.22
CMSS1-203ENST00000478909 NSFL1CQ9UNZ2 370 aaKnown RBP7.41□□□□□ -1.22
CMSS1-203ENST00000478909 PHF24Q9UPV7 400 aa7.41□□□□□ -1.22
CMSS1-203ENST00000478909 RFX7Q2KHR2 1363 aa7.41□□□□□ -1.22
CMSS1-203ENST00000478909 COL5A2P05997 1499 aaPredicted RBP7.41□□□□□ -1.22
CMSS1-203ENST00000478909 PLCH1Q4KWH8 1693 aa7.41□□□□□ -1.22
CMSS1-203ENST00000478909 GOLGA6L22H0YM25 854 aa7.4□□□□□ -1.22
CMSS1-203ENST00000478909 SRGAP3O43295 1099 aa7.4□□□□□ -1.22
CMSS1-203ENST00000478909 GLRX3O76003 335 aaKnown RBP7.4□□□□□ -1.22
CMSS1-203ENST00000478909 BCRP11274 1271 aa7.4□□□□□ -1.22
CMSS1-203ENST00000478909 MARSP56192 900 aaKnown RBP7.4□□□□□ -1.22
CMSS1-203ENST00000478909 NUCB2P80303 420 aa7.4□□□□□ -1.22
CMSS1-203ENST00000478909 RASSF7Q02833 373 aa7.4□□□□□ -1.22
CMSS1-203ENST00000478909 PPP1R42Q7Z4L9 355 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms