RNA–Protein interactions for RNA: ENST00000478503.6

SH3D19-207, Transcript of SH3 domain containing 19, humanhuman

TSL 2

Gene SH3D19, Length 4,038 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-207ENST00000478503 C5P01031 1676 aa7.04□□□□□ -1.28
SH3D19-207ENST00000478503 KLF18A0A0U1RQI7 1052 aa7.04□□□□□ -1.28
SH3D19-207ENST00000478503 CCDC194A0A1B0GVG4 234 aa7.04□□□□□ -1.28
SH3D19-207ENST00000478503 GPAA1O43292 621 aa7.04□□□□□ -1.28
SH3D19-207ENST00000478503 TYRO3Q06418 890 aa7.04□□□□□ -1.28
SH3D19-207ENST00000478503 USPL1Q5W0Q7 1092 aa7.04□□□□□ -1.28
SH3D19-207ENST00000478503 CMTR1Q8N1G2 835 aaKnown RBP7.04□□□□□ -1.28
SH3D19-207ENST00000478503 RPS6KC1Q96S38 1066 aa7.04□□□□□ -1.28
SH3D19-207ENST00000478503 ZKSCAN3Q9BRR0 538 aa7.04□□□□□ -1.28
SH3D19-207ENST00000478503 OVOS2A0A0G2JMS6 1433 aa7.03□□□□□ -1.28
SH3D19-207ENST00000478503 GOLGA8BA8MQT2 603 aa7.03□□□□□ -1.28
SH3D19-207ENST00000478503 BIN1O00499 593 aa7.03□□□□□ -1.28
SH3D19-207ENST00000478503 PDIA3P30101 505 aaKnown RBP7.03□□□□□ -1.28
SH3D19-207ENST00000478503 DZIP3Q86Y13 1208 aaKnown RBP7.03□□□□□ -1.28
SH3D19-207ENST00000478503 TTLL11Q8NHH1 800 aa7.03□□□□□ -1.28
SH3D19-207ENST00000478503 TMEM51Q9NW97 253 aa7.03□□□□□ -1.28
SH3D19-207ENST00000478503 JAG2Q9Y219 1238 aa7.03□□□□□ -1.28
SH3D19-207ENST00000478503 COMMD10Q9Y6G5 202 aa7.03□□□□□ -1.28
SH3D19-207ENST00000478503 SMIM22K7EJ46 135 aa7.03□□□□□ -1.28
SH3D19-207ENST00000478503 CPLX1O14810 134 aa7.03□□□□□ -1.28
SH3D19-207ENST00000478503 PRC1O43663 620 aa7.03□□□□□ -1.28
SH3D19-207ENST00000478503 CCDC192P0DO97 292 aa7.03□□□□□ -1.28
SH3D19-207ENST00000478503 ADD1P35611 737 aaKnown RBP7.03□□□□□ -1.28
SH3D19-207ENST00000478503 NLRP10Q86W26 655 aa7.03□□□□□ -1.28
SH3D19-207ENST00000478503 MICU3Q86XE3 530 aa7.03□□□□□ -1.28
SH3D19-207ENST00000478503 MIGA1Q8NAN2 632 aa7.03□□□□□ -1.28
SH3D19-207ENST00000478503 TMEM87AQ8NBN3 555 aa7.03□□□□□ -1.28
SH3D19-207ENST00000478503 PHKBQ93100 1093 aa7.03□□□□□ -1.28
SH3D19-207ENST00000478503 ISCA1Q9BUE6 129 aa7.03□□□□□ -1.28
SH3D19-207ENST00000478503 TANGO6Q9C0B7 1094 aa7.03□□□□□ -1.28
SH3D19-207ENST00000478503 PIH1D3Q9NQM4 214 aaKnown RBP7.03□□□□□ -1.28
SH3D19-207ENST00000478503 MAP3K20Q9NYL2 800 aaKnown RBP7.03□□□□□ -1.28
SH3D19-207ENST00000478503 A0A1B0GVL5 298 aa7.03□□□□□ -1.28
SH3D19-207ENST00000478503 EXOC5O00471 708 aa7.03□□□□□ -1.28
SH3D19-207ENST00000478503 FOXP2O15409 715 aa7.03□□□□□ -1.28
SH3D19-207ENST00000478503 ATP2B1P20020 1258 aa7.03□□□□□ -1.28
SH3D19-207ENST00000478503 PIP4K2BP78356 416 aa7.03□□□□□ -1.28
SH3D19-207ENST00000478503 LRMPQ12912 555 aa7.03□□□□□ -1.28
SH3D19-207ENST00000478503 SND1Q7KZF4 910 aaKnown RBP eCLIP7.03□□□□□ -1.28
SH3D19-207ENST00000478503 RALYLQ86SE5 291 aaKnown RBP7.03□□□□□ -1.28
SH3D19-207ENST00000478503 TRIM5Q9C035 493 aa7.03□□□□□ -1.28
SH3D19-207ENST00000478503 ZHX3Q9H4I2 956 aa7.03□□□□□ -1.28
SH3D19-207ENST00000478503 B4E1Z4 1266 aa7.02□□□□□ -1.29
SH3D19-207ENST00000478503 OFD1O75665 1012 aa7.02□□□□□ -1.29
SH3D19-207ENST00000478503 PTGS1P23219 599 aa7.02□□□□□ -1.29
SH3D19-207ENST00000478503 RESTQ13127 1097 aa7.02□□□□□ -1.29
SH3D19-207ENST00000478503 CSPP1Q1MSJ5 1256 aa7.02□□□□□ -1.29
SH3D19-207ENST00000478503 CCAR1Q8IX12 1150 aaKnown RBP7.02□□□□□ -1.29
SH3D19-207ENST00000478503 UQCRHLA0A096LP55 91 aa7.02□□□□□ -1.29
SH3D19-207ENST00000478503 ZNF213O14771 459 aa7.02□□□□□ -1.29
SH3D19-207ENST00000478503 PRKAB2O43741 272 aa7.02□□□□□ -1.29
SH3D19-207ENST00000478503 UQCRHP07919 91 aa7.02□□□□□ -1.29
SH3D19-207ENST00000478503 MARCKSP29966 332 aaPredicted RBP7.02□□□□□ -1.29
SH3D19-207ENST00000478503 CTDSPL2Q05D32 466 aa7.02□□□□□ -1.29
SH3D19-207ENST00000478503 SF3A1Q15459 793 aaKnown RBP7.02□□□□□ -1.29
SH3D19-207ENST00000478503 PTPN21Q16825 1174 aa7.02□□□□□ -1.29
SH3D19-207ENST00000478503 IMMTQ16891 758 aaKnown RBP7.02□□□□□ -1.29
SH3D19-207ENST00000478503 ZBTB38Q8NAP3 1195 aaPredicted RBP7.02□□□□□ -1.29
SH3D19-207ENST00000478503 SCAND2PQ9GZW5 306 aaPredicted RBP7.02□□□□□ -1.29
SH3D19-207ENST00000478503 GOLPH3LQ9H4A5 285 aa7.02□□□□□ -1.29
SH3D19-207ENST00000478503 CBX8Q9HC52 389 aa7.02□□□□□ -1.29
SH3D19-207ENST00000478503 PYCARDQ9ULZ3 195 aa7.02□□□□□ -1.29
SH3D19-207ENST00000478503 FAN1Q9Y2M0 1017 aa7.02□□□□□ -1.29
SH3D19-207ENST00000478503 ADAMTSL3P82987 1691 aa7.02□□□□□ -1.29
SH3D19-207ENST00000478503 TUBGCP6Q96RT7 1819 aa7.02□□□□□ -1.29
SH3D19-207ENST00000478503 TRPM3Q9HCF6 1732 aaPredicted RBP7.02□□□□□ -1.29
SH3D19-207ENST00000478503 SOS2Q07890 1332 aaPredicted RBP7.02□□□□□ -1.29
SH3D19-207ENST00000478503 ANKRD18BA2A2Z9 1011 aa7.02□□□□□ -1.29
SH3D19-207ENST00000478503 KCNQ2O43526 872 aa7.02□□□□□ -1.29
SH3D19-207ENST00000478503 KIAA2012Q0VF49 1180 aa7.02□□□□□ -1.29
SH3D19-207ENST00000478503 SASS6Q6UVJ0 657 aa7.02□□□□□ -1.29
SH3D19-207ENST00000478503 GIGYF2Q6Y7W6 1299 aaKnown RBP7.02□□□□□ -1.29
SH3D19-207ENST00000478503 EP400NLQ6ZTU2 488 aa7.02□□□□□ -1.29
SH3D19-207ENST00000478503 HELLSQ9NRZ9 838 aa7.02□□□□□ -1.29
SH3D19-207ENST00000478503 HDAC9Q9UKV0 1011 aa7.02□□□□□ -1.29
SH3D19-207ENST00000478503 ZMYND10O75800 440 aa7.01□□□□□ -1.29
SH3D19-207ENST00000478503 ATXN8OSP0DMR3 200 aa7.01□□□□□ -1.29
SH3D19-207ENST00000478503 FDPSP14324 419 aaKnown RBP7.01□□□□□ -1.29
SH3D19-207ENST00000478503 BCAMP50895 628 aa7.01□□□□□ -1.29
SH3D19-207ENST00000478503 ARID5BQ14865 1188 aa7.01□□□□□ -1.29
SH3D19-207ENST00000478503 NFXL1Q6ZNB6 911 aa7.01□□□□□ -1.29
SH3D19-207ENST00000478503 DHX38Q92620 1227 aaKnown RBP7.01□□□□□ -1.29
SH3D19-207ENST00000478503 ORC3Q9UBD5 711 aaPredicted RBP7.01□□□□□ -1.29
SH3D19-207ENST00000478503 ABCF2Q9UG63 623 aa7.01□□□□□ -1.29
SH3D19-207ENST00000478503 KLF15Q9UIH9 416 aa7.01□□□□□ -1.29
SH3D19-207ENST00000478503 EP400Q96L91 3159 aa7.01□□□□□ -1.29
SH3D19-207ENST00000478503 COL5A2P05997 1499 aaPredicted RBP7.01□□□□□ -1.29
SH3D19-207ENST00000478503 MAP3K15Q6ZN16 1313 aa7.01□□□□□ -1.29
SH3D19-207ENST00000478503 ZNF532Q9HCE3 1301 aa7.01□□□□□ -1.29
SH3D19-207ENST00000478503 PFKFB2O60825 505 aa7.01□□□□□ -1.29
SH3D19-207ENST00000478503 ATP6V1AP38606 617 aa7.01□□□□□ -1.29
SH3D19-207ENST00000478503 ZNF165P49910 485 aa7.01□□□□□ -1.29
SH3D19-207ENST00000478503 EXOSC10Q01780 885 aaKnown RBP7.01□□□□□ -1.29
SH3D19-207ENST00000478503 CCDC102BQ68D86 513 aa7.01□□□□□ -1.29
SH3D19-207ENST00000478503 FSIP1Q8NA03 581 aa7.01□□□□□ -1.29
SH3D19-207ENST00000478503 RBM46Q8TBY0 533 aaKnown RBP7.01□□□□□ -1.29
SH3D19-207ENST00000478503 FUCA2Q9BTY2 467 aa7.01□□□□□ -1.29
SH3D19-207ENST00000478503 ARMT1Q9H993 441 aa7.01□□□□□ -1.29
SH3D19-207ENST00000478503 GNL3LQ9NVN8 582 aaKnown RBP7.01□□□□□ -1.29
SH3D19-207ENST00000478503 CLIC4Q9Y696 253 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms