RNA–Protein interactions for RNA: ENST00000476994.1

SREBF1-211, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-211ENST00000476994 EDC3Q96F86 508 aaKnown RBP21.45■■□□□ 1.02
SREBF1-211ENST00000476994 ZIC5Q96T25 663 aa21.45■■□□□ 1.02
SREBF1-211ENST00000476994 SNRKQ9NRH2 765 aa21.45■■□□□ 1.02
SREBF1-211ENST00000476994 DENND2AQ9ULE3 1009 aa21.45■■□□□ 1.02
SREBF1-211ENST00000476994 MYH2Q9UKX2 1941 aa21.45■■□□□ 1.02
SREBF1-211ENST00000476994 CYP2E1P05181 493 aaPredicted RBP21.44■■□□□ 1.02
SREBF1-211ENST00000476994 DGKZQ13574 1117 aa21.44■■□□□ 1.02
SREBF1-211ENST00000476994 NBPF9Q3BBW0 867 aa21.44■■□□□ 1.02
SREBF1-211ENST00000476994 BMP2KLQ5H9B9 411 aa21.44■■□□□ 1.02
SREBF1-211ENST00000476994 ANTXR1Q9H6X2 564 aa21.44■■□□□ 1.02
SREBF1-211ENST00000476994 ECM29Q5VYK3 1845 aa21.43■■□□□ 1.02
SREBF1-211ENST00000476994 APOBEC3FQ8IUX4 373 aaKnown RBP21.43■■□□□ 1.02
SREBF1-211ENST00000476994 MXD3Q9BW11 206 aa21.43■■□□□ 1.02
SREBF1-211ENST00000476994 MCOLN1Q9GZU1 580 aa21.43■■□□□ 1.02
SREBF1-211ENST00000476994 WNT10BO00744 389 aa21.42■■□□□ 1.02
SREBF1-211ENST00000476994 TRPA1O75762 1119 aa21.42■■□□□ 1.02
SREBF1-211ENST00000476994 MAP4K4O95819 1239 aaPredicted RBP21.42■■□□□ 1.02
SREBF1-211ENST00000476994 GTF2IP78347 998 aa21.42■■□□□ 1.02
SREBF1-211ENST00000476994 KIAA0825Q8IV33 1275 aa21.42■■□□□ 1.02
SREBF1-211ENST00000476994 DNAJC2Q99543 621 aaKnown RBP21.42■■□□□ 1.02
SREBF1-211ENST00000476994 SALL1Q9NSC2 1324 aa21.42■■□□□ 1.02
SREBF1-211ENST00000476994 SDSP20132 328 aa21.41■■□□□ 1.02
SREBF1-211ENST00000476994 RASAL3Q86YV0 1011 aa21.41■■□□□ 1.02
SREBF1-211ENST00000476994 PIH1D3Q9NQM4 214 aaKnown RBP21.41■■□□□ 1.02
SREBF1-211ENST00000476994 PAG1Q9NWQ8 432 aa21.41■■□□□ 1.02
SREBF1-211ENST00000476994 RNF186Q9NXI6 227 aa21.41■■□□□ 1.02
SREBF1-211ENST00000476994 GOLIM4O00461 696 aa21.4■■□□□ 1.02
SREBF1-211ENST00000476994 CSRNP1Q96S65 589 aa21.4■■□□□ 1.02
SREBF1-211ENST00000476994 JAG2Q9Y219 1238 aa21.4■■□□□ 1.02
SREBF1-211ENST00000476994 CHAF1AQ13111 956 aaPredicted RBP21.39■■□□□ 1.01
SREBF1-211ENST00000476994 GRIK5Q16478 980 aa21.39■■□□□ 1.01
SREBF1-211ENST00000476994 TBC1D9Q6ZT07 1266 aa21.39■■□□□ 1.01
SREBF1-211ENST00000476994 ARMC9Q7Z3E5 817 aa21.39■■□□□ 1.01
SREBF1-211ENST00000476994 CERS5Q8N5B7 392 aa21.39■■□□□ 1.01
SREBF1-211ENST00000476994 CDK5RAP2Q96SN8 1893 aa21.39■■□□□ 1.01
SREBF1-211ENST00000476994 RFX7Q2KHR2 1363 aa21.38■■□□□ 1.01
SREBF1-211ENST00000476994 MYO1BO43795 1136 aa21.38■■□□□ 1.01
SREBF1-211ENST00000476994 DLGAP5Q15398 846 aa21.38■■□□□ 1.01
SREBF1-211ENST00000476994 KBTBD3Q8NAB2 608 aa21.38■■□□□ 1.01
SREBF1-211ENST00000476994 WDR66Q8TBY9 1149 aa21.38■■□□□ 1.01
SREBF1-211ENST00000476994 EVI5LQ96CN4 794 aa21.38■■□□□ 1.01
SREBF1-211ENST00000476994 SCAF8Q9UPN6 1271 aaKnown RBP21.38■■□□□ 1.01
SREBF1-211ENST00000476994 UBE2Q2LH0YL09 131 aa21.37■■□□□ 1.01
SREBF1-211ENST00000476994 FRAT2O75474 233 aaPredicted RBP21.37■■□□□ 1.01
SREBF1-211ENST00000476994 FKBP1AP62942 108 aaKnown RBP21.37■■□□□ 1.01
SREBF1-211ENST00000476994 MLLT1Q03111 559 aaPredicted RBP21.37■■□□□ 1.01
SREBF1-211ENST00000476994 PRAMEF18Q5VWM3 479 aa21.37■■□□□ 1.01
SREBF1-211ENST00000476994 ZNF384Q8TF68 577 aa21.37■■□□□ 1.01
SREBF1-211ENST00000476994 TBC1D22AQ8WUA7 517 aa21.36■■□□□ 1.01
SREBF1-211ENST00000476994 PRDX5P30044 214 aa21.35■■□□□ 1.01
SREBF1-211ENST00000476994 TTF1Q15361 905 aaPredicted RBP21.35■■□□□ 1.01
SREBF1-211ENST00000476994 MFSD14BQ5SR56 506 aa21.35■■□□□ 1.01
SREBF1-211ENST00000476994 MOB2Q70IA6 237 aa21.35■■□□□ 1.01
SREBF1-211ENST00000476994 TRIM6-TRIM34B2RNG4 842 aa21.34■■□□□ 1.01
SREBF1-211ENST00000476994 CHGBP05060 677 aa21.34■■□□□ 1.01
SREBF1-211ENST00000476994 SREBF2Q12772 1141 aa21.34■■□□□ 1.01
SREBF1-211ENST00000476994 TICAM2Q86XR7 235 aa21.34■■□□□ 1.01
SREBF1-211ENST00000476994 RILPL2Q969X0 211 aa21.34■■□□□ 1.01
SREBF1-211ENST00000476994 ZGPATQ8N5A5 531 aaKnown RBP21.33■■□□□ 1.01
SREBF1-211ENST00000476994 ABCF2Q9UG63 623 aa21.33■■□□□ 1.01
SREBF1-211ENST00000476994 SUGT1Q9Y2Z0 365 aa21.33■■□□□ 1.01
SREBF1-211ENST00000476994 FOCADQ5VW36 1801 aa21.33■■□□□ 1.01
SREBF1-211ENST00000476994 TCRBV5S4A2TA0A5A2 114 aa21.32■■□□□ 1
SREBF1-211ENST00000476994 F8W031 263 aaPredicted RBP21.32■■□□□ 1
SREBF1-211ENST00000476994 IGSF3O75054 1194 aa21.32■■□□□ 1
SREBF1-211ENST00000476994 RBM5P52756 815 aaKnown RBP eCLIP21.32■■□□□ 1
SREBF1-211ENST00000476994 PRKG1Q13976 671 aa21.32■■□□□ 1
SREBF1-211ENST00000476994 MTMR14Q8NCE2 650 aa21.32■■□□□ 1
SREBF1-211ENST00000476994 FSD1Q9BTV5 496 aa21.32■■□□□ 1
SREBF1-211ENST00000476994 PPP2R3BQ9Y5P8 575 aa21.32■■□□□ 1
SREBF1-211ENST00000476994 PPP1R12BO60237 982 aaPredicted RBP21.31■■□□□ 1
SREBF1-211ENST00000476994 IDH1O75874 414 aaKnown RBP21.31■■□□□ 1
SREBF1-211ENST00000476994 ADD2P35612 726 aa21.31■■□□□ 1
SREBF1-211ENST00000476994 RGS19P49795 217 aa21.31■■□□□ 1
SREBF1-211ENST00000476994 SLFNL1Q499Z3 407 aa21.31■■□□□ 1
SREBF1-211ENST00000476994 ERICH6Q7L0X2 663 aa21.31■■□□□ 1
SREBF1-211ENST00000476994 CTU1Q7Z7A3 348 aaKnown RBP21.31■■□□□ 1
SREBF1-211ENST00000476994 NSUN4Q96CB9 384 aaKnown RBP21.31■■□□□ 1
SREBF1-211ENST00000476994 ZBED3Q96IU2 234 aaPredicted RBP21.31■■□□□ 1
SREBF1-211ENST00000476994 DEFB129Q9H1M3 183 aa21.31■■□□□ 1
SREBF1-211ENST00000476994 ANGEL1Q9UNK9 670 aaKnown RBP21.31■■□□□ 1
SREBF1-211ENST00000476994 PDE6AP16499 860 aa21.3■■□□□ 1
SREBF1-211ENST00000476994 MECOMQ03112 1051 aa21.3■■□□□ 1
SREBF1-211ENST00000476994 SUPT20HL1Q3ZLR7 823 aa21.3■■□□□ 1
SREBF1-211ENST00000476994 CFAP100Q494V2 611 aa21.3■■□□□ 1
SREBF1-211ENST00000476994 SPTY2D1Q68D10 685 aaPredicted RBP21.3■■□□□ 1
SREBF1-211ENST00000476994 LRP2BPQ9P2M1 347 aa21.3■■□□□ 1
SREBF1-211ENST00000476994 LDHBP07195 334 aaKnown RBP21.29■■□□□ 1
SREBF1-211ENST00000476994 CHMLP26374 656 aa21.29■■□□□ 1
SREBF1-211ENST00000476994 TM4SF4P48230 202 aa21.29■■□□□ 1
SREBF1-211ENST00000476994 MAP3K12Q12852 859 aa21.29■■□□□ 1
SREBF1-211ENST00000476994 MKRN3Q13064 507 aaKnown RBP21.29■■□□□ 1
SREBF1-211ENST00000476994 VEZTQ9HBM0 779 aa21.29■■□□□ 1
SREBF1-211ENST00000476994 RNF113AO15541 343 aaKnown RBP21.28■■□□□ 1
SREBF1-211ENST00000476994 CDC45O75419 566 aa21.28■■□□□ 1
SREBF1-211ENST00000476994 TNFAIP1Q13829 316 aa21.28■■□□□ 1
SREBF1-211ENST00000476994 UBE3CQ15386 1083 aa21.28■■□□□ 1
SREBF1-211ENST00000476994 ZMYM1Q5SVZ6 1142 aa21.28■■□□□ 1
SREBF1-211ENST00000476994 ADGRA1Q86SQ6 560 aa21.28■■□□□ 1
SREBF1-211ENST00000476994 SLC10A4Q96EP9 437 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms