RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 TMOD2Q9NZR1 351 aa13.13□□□□□ -0.31
HDAC3-203ENST00000467533 TRIM35Q9UPQ4 493 aa13.13□□□□□ -0.31
HDAC3-203ENST00000467533 VCANP13611 3396 aa13.12□□□□□ -0.31
HDAC3-203ENST00000467533 COL2A1P02458 1487 aaPredicted RBP13.12□□□□□ -0.31
HDAC3-203ENST00000467533 ANKRD18BA2A2Z9 1011 aa13.12□□□□□ -0.31
HDAC3-203ENST00000467533 NEURL1BA8MQ27 555 aa13.12□□□□□ -0.31
HDAC3-203ENST00000467533 ZNF697Q5TEC3 545 aa13.12□□□□□ -0.31
HDAC3-203ENST00000467533 FAM109BQ6ICB4 259 aaPredicted RBP13.12□□□□□ -0.31
HDAC3-203ENST00000467533 MAFAQ8NHW3 353 aaPredicted RBP13.12□□□□□ -0.31
HDAC3-203ENST00000467533 KCNH4Q9UQ05 1017 aa13.12□□□□□ -0.31
HDAC3-203ENST00000467533 RPAP1Q9BWH6 1393 aaPredicted RBP13.11□□□□□ -0.31
HDAC3-203ENST00000467533 PI4KAP2A4QPH2 592 aa13.11□□□□□ -0.31
HDAC3-203ENST00000467533 POTEB2H3BUK9 544 aa13.11□□□□□ -0.31
HDAC3-203ENST00000467533 H7C1W4 665 aa13.11□□□□□ -0.31
HDAC3-203ENST00000467533 KSR2Q6VAB6 950 aa13.11□□□□□ -0.31
HDAC3-203ENST00000467533 PI4KAP1Q8N8J0 262 aa13.11□□□□□ -0.31
HDAC3-203ENST00000467533 CCER1Q8TC90 406 aaPredicted RBP13.11□□□□□ -0.31
HDAC3-203ENST00000467533 SYMPKQ92797 1274 aaKnown RBP13.11□□□□□ -0.31
HDAC3-203ENST00000467533 AK9Q5TCS8 1911 aa13.11□□□□□ -0.31
HDAC3-203ENST00000467533 PLIN1O60240 522 aa13.1□□□□□ -0.31
HDAC3-203ENST00000467533 MDM2Q00987 491 aaPredicted RBP13.1□□□□□ -0.31
HDAC3-203ENST00000467533 MOGSQ13724 837 aa13.1□□□□□ -0.31
HDAC3-203ENST00000467533 MIGA2Q7L4E1 593 aa13.1□□□□□ -0.31
HDAC3-203ENST00000467533 FAM83AQ86UY5 434 aa13.1□□□□□ -0.31
HDAC3-203ENST00000467533 PLA2G12BQ9BX93 195 aa13.1□□□□□ -0.31
HDAC3-203ENST00000467533 RAPGEFL1Q9UHV5 662 aa13.1□□□□□ -0.31
HDAC3-203ENST00000467533 CHMP3Q9Y3E7 222 aa13.1□□□□□ -0.31
HDAC3-203ENST00000467533 CSF1RP07333 972 aa13.09□□□□□ -0.31
HDAC3-203ENST00000467533 CCDC30Q5VVM6 783 aa13.09□□□□□ -0.31
HDAC3-203ENST00000467533 GPAT2Q6NUI2 795 aa13.09□□□□□ -0.31
HDAC3-203ENST00000467533 TEKT1Q969V4 418 aa13.09□□□□□ -0.31
HDAC3-203ENST00000467533 COA7Q96BR5 231 aa13.09□□□□□ -0.31
HDAC3-203ENST00000467533 EYSQ5T1H1 3165 aa13.09□□□□□ -0.31
HDAC3-203ENST00000467533 PTPRFP10586 1907 aa13.08□□□□□ -0.32
HDAC3-203ENST00000467533 PLA2G5P39877 138 aa13.08□□□□□ -0.32
HDAC3-203ENST00000467533 IFIT5Q13325 482 aaKnown RBP13.08□□□□□ -0.32
HDAC3-203ENST00000467533 TDRD7Q8NHU6 1098 aaKnown RBP13.08□□□□□ -0.32
HDAC3-203ENST00000467533 SMCR8Q8TEV9 937 aaPredicted RBP13.08□□□□□ -0.32
HDAC3-203ENST00000467533 CDX2Q99626 313 aaPredicted RBP13.08□□□□□ -0.32
HDAC3-203ENST00000467533 DOCK2Q92608 1830 aa13.08□□□□□ -0.32
HDAC3-203ENST00000467533 MAST2Q6P0Q8 1798 aa13.07□□□□□ -0.32
HDAC3-203ENST00000467533 HMGCRP04035 888 aa13.07□□□□□ -0.32
HDAC3-203ENST00000467533 HIBADHP31937 336 aaKnown RBP13.07□□□□□ -0.32
HDAC3-203ENST00000467533 GYG1P46976 350 aa13.07□□□□□ -0.32
HDAC3-203ENST00000467533 GCKRQ14397 625 aa13.07□□□□□ -0.32
HDAC3-203ENST00000467533 GRIK5Q16478 980 aa13.07□□□□□ -0.32
HDAC3-203ENST00000467533 TAF7LQ5H9L4 462 aa13.07□□□□□ -0.32
HDAC3-203ENST00000467533 GADL1Q6ZQY3 521 aa13.07□□□□□ -0.32
HDAC3-203ENST00000467533 FAM122AQ96E09 287 aa13.07□□□□□ -0.32
HDAC3-203ENST00000467533 HMX1Q9NP08 348 aaPredicted RBP13.07□□□□□ -0.32
HDAC3-203ENST00000467533 DOCK3Q8IZD9 2030 aa13.06□□□□□ -0.32
HDAC3-203ENST00000467533 CXCL11O14625 94 aa13.06□□□□□ -0.32
HDAC3-203ENST00000467533 CASP7P55210 303 aa13.06□□□□□ -0.32
HDAC3-203ENST00000467533 HDLBPQ00341 1268 aaKnown RBP13.06□□□□□ -0.32
HDAC3-203ENST00000467533 CHAF1AQ13111 956 aaPredicted RBP13.06□□□□□ -0.32
HDAC3-203ENST00000467533 NOL9Q5SY16 702 aaKnown RBP13.06□□□□□ -0.32
HDAC3-203ENST00000467533 FKBP1CQ5VVH2 108 aa13.06□□□□□ -0.32
HDAC3-203ENST00000467533 FASTKD5Q7L8L6 764 aaKnown RBP13.06□□□□□ -0.32
HDAC3-203ENST00000467533 RUNDC1Q96C34 613 aa13.06□□□□□ -0.32
HDAC3-203ENST00000467533 CHMP4AQ9BY43 222 aa13.06□□□□□ -0.32
HDAC3-203ENST00000467533 MYH16Q9H6N6 1097 aa13.06□□□□□ -0.32
HDAC3-203ENST00000467533 CNNM1Q9NRU3 951 aa13.06□□□□□ -0.32
HDAC3-203ENST00000467533 PFASO15067 1338 aa13.06□□□□□ -0.32
HDAC3-203ENST00000467533 TNFRSF10AO00220 468 aa13.05□□□□□ -0.32
HDAC3-203ENST00000467533 C8orf58Q8NAV2 365 aa13.05□□□□□ -0.32
HDAC3-203ENST00000467533 MYLIPQ8WY64 445 aa13.05□□□□□ -0.32
HDAC3-203ENST00000467533 ZDHHC15Q96MV8 337 aa13.05□□□□□ -0.32
HDAC3-203ENST00000467533 LBHD1Q9BQE6 289 aaPredicted RBP13.05□□□□□ -0.32
HDAC3-203ENST00000467533 ZNF112Q9UJU3 913 aa13.05□□□□□ -0.32
HDAC3-203ENST00000467533 IQSEC3Q9UPP2 1182 aaPredicted RBP13.05□□□□□ -0.32
HDAC3-203ENST00000467533 DOCK1Q14185 1865 aa13.05□□□□□ -0.32
HDAC3-203ENST00000467533 LTBP2Q14767 1821 aa13.04□□□□□ -0.32
HDAC3-203ENST00000467533 MYH13Q9UKX3 1938 aa13.04□□□□□ -0.32
HDAC3-203ENST00000467533 PRUNE2Q8WUY3 3088 aa13.04□□□□□ -0.32
HDAC3-203ENST00000467533 TMEM265A0A087WTH1 108 aa13.04□□□□□ -0.32
HDAC3-203ENST00000467533 A0A0G2JLL6 359 aaPredicted RBP13.04□□□□□ -0.32
HDAC3-203ENST00000467533 ZNF853P0CG23 659 aa13.04□□□□□ -0.32
HDAC3-203ENST00000467533 FOSL2P15408 326 aa13.04□□□□□ -0.32
HDAC3-203ENST00000467533 TRIM32Q13049 653 aa13.04□□□□□ -0.32
HDAC3-203ENST00000467533 LDHAL6AQ6ZMR3 332 aa13.04□□□□□ -0.32
HDAC3-203ENST00000467533 PRRT2Q7Z6L0 340 aaPredicted RBP13.04□□□□□ -0.32
HDAC3-203ENST00000467533 ANKRD13CQ8N6S4 541 aa13.04□□□□□ -0.32
HDAC3-203ENST00000467533 TBC1D22AQ8WUA7 517 aa13.04□□□□□ -0.32
HDAC3-203ENST00000467533 STK31Q9BXU1 1019 aa13.04□□□□□ -0.32
HDAC3-203ENST00000467533 IFT57Q9NWB7 429 aa13.04□□□□□ -0.32
HDAC3-203ENST00000467533 OGDHLQ9ULD0 1010 aa13.04□□□□□ -0.32
HDAC3-203ENST00000467533 FRMPD3Q5JV73 1810 aa13.04□□□□□ -0.32
HDAC3-203ENST00000467533 FRAT2O75474 233 aaPredicted RBP13.03□□□□□ -0.32
HDAC3-203ENST00000467533 GNAI1P63096 354 aa13.03□□□□□ -0.32
HDAC3-203ENST00000467533 TCP10Q12799 353 aa13.03□□□□□ -0.32
HDAC3-203ENST00000467533 UBE4AQ14139 1066 aa13.03□□□□□ -0.32
HDAC3-203ENST00000467533 LRRC26Q2I0M4 334 aa13.03□□□□□ -0.32
HDAC3-203ENST00000467533 VPS37DQ86XT2 251 aa13.03□□□□□ -0.32
HDAC3-203ENST00000467533 FAM151AQ8WW52 585 aa13.03□□□□□ -0.32
HDAC3-203ENST00000467533 ZNF594Q96JF6 807 aaPredicted RBP13.03□□□□□ -0.32
HDAC3-203ENST00000467533 FAM84BQ96KN1 310 aaPredicted RBP13.03□□□□□ -0.32
HDAC3-203ENST00000467533 SLC45A1Q9Y2W3 748 aa13.03□□□□□ -0.32
HDAC3-203ENST00000467533 PLXNB2O15031 1838 aa13.03□□□□□ -0.32
HDAC3-203ENST00000467533 PHIPQ8WWQ0 1821 aa13.03□□□□□ -0.32
HDAC3-203ENST00000467533 MAST3O60307 1309 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms