RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 NEURL1BA8MQ27 555 aa16.99■□□□□ 0.31
HDAC6-215ENST00000465457 MYO1BO43795 1136 aa16.99■□□□□ 0.31
HDAC6-215ENST00000465457 ALDH1L1O75891 902 aa16.99■□□□□ 0.31
HDAC6-215ENST00000465457 RBM5P52756 815 aaKnown RBP eCLIP16.99■□□□□ 0.31
HDAC6-215ENST00000465457 KSR2Q6VAB6 950 aa16.99■□□□□ 0.31
HDAC6-215ENST00000465457 SIRT2Q8IXJ6 389 aa16.99■□□□□ 0.31
HDAC6-215ENST00000465457 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.99■□□□□ 0.31
HDAC6-215ENST00000465457 TMEM39BQ9GZU3 492 aa16.99■□□□□ 0.31
HDAC6-215ENST00000465457 ANKRD2Q9GZV1 360 aa16.99■□□□□ 0.31
HDAC6-215ENST00000465457 DCTPP1Q9H773 170 aa16.99■□□□□ 0.31
HDAC6-215ENST00000465457 UBTFL1P0CB47 393 aaPredicted RBP16.98■□□□□ 0.31
HDAC6-215ENST00000465457 SPDYE2Q495Y8 402 aa16.98■□□□□ 0.31
HDAC6-215ENST00000465457 SKAP1Q86WV1 359 aa16.98■□□□□ 0.31
HDAC6-215ENST00000465457 TDRD3Q9H7E2 651 aaKnown RBP16.98■□□□□ 0.31
HDAC6-215ENST00000465457 ZNF70Q9UC06 446 aaPredicted RBP16.98■□□□□ 0.31
HDAC6-215ENST00000465457 BTBD19C9JJ37 291 aa16.97■□□□□ 0.31
HDAC6-215ENST00000465457 TLR2O60603 784 aa16.97■□□□□ 0.31
HDAC6-215ENST00000465457 GTF2A2P52657 109 aa16.97■□□□□ 0.31
HDAC6-215ENST00000465457 CASP7P55210 303 aa16.97■□□□□ 0.31
HDAC6-215ENST00000465457 C8orf34Q49A92 452 aa16.97■□□□□ 0.31
HDAC6-215ENST00000465457 MPHOSPH8Q99549 860 aa16.97■□□□□ 0.31
HDAC6-215ENST00000465457 TCP10L2B9ZVM9 353 aa16.96■□□□□ 0.31
HDAC6-215ENST00000465457 H7C1W4 665 aa16.96■□□□□ 0.31
HDAC6-215ENST00000465457 IL1R1P14778 569 aa16.96■□□□□ 0.31
HDAC6-215ENST00000465457 BEND3Q5T5X7 828 aa16.96■□□□□ 0.31
HDAC6-215ENST00000465457 SNCAIPQ9Y6H5 919 aa16.96■□□□□ 0.31
HDAC6-215ENST00000465457 EIF5BO60841 1220 aaKnown RBP16.95■□□□□ 0.3
HDAC6-215ENST00000465457 ARHGEF6Q15052 776 aa16.95■□□□□ 0.3
HDAC6-215ENST00000465457 TRIM47Q96LD4 638 aa16.95■□□□□ 0.3
HDAC6-215ENST00000465457 CPA4Q9UI42 421 aa16.95■□□□□ 0.3
HDAC6-215ENST00000465457 SPDYE5A6NIY4 337 aa16.94■□□□□ 0.3
HDAC6-215ENST00000465457 CACNB3P54284 484 aa16.94■□□□□ 0.3
HDAC6-215ENST00000465457 GRIK5Q16478 980 aa16.94■□□□□ 0.3
HDAC6-215ENST00000465457 ANKRD45Q5TZF3 282 aa16.94■□□□□ 0.3
HDAC6-215ENST00000465457 C15orf52Q6ZUT6 534 aaKnown RBP16.94■□□□□ 0.3
HDAC6-215ENST00000465457 LINS1Q8NG48 757 aa16.94■□□□□ 0.3
HDAC6-215ENST00000465457 IRF6O14896 467 aa16.93■□□□□ 0.3
HDAC6-215ENST00000465457 CSF1RP07333 972 aa16.93■□□□□ 0.3
HDAC6-215ENST00000465457 CCL5P13501 91 aa16.93■□□□□ 0.3
HDAC6-215ENST00000465457 OSBPP22059 807 aa16.93■□□□□ 0.3
HDAC6-215ENST00000465457 GJA8P48165 433 aa16.93■□□□□ 0.3
HDAC6-215ENST00000465457 FKBP1AP62942 108 aaKnown RBP16.93■□□□□ 0.3
HDAC6-215ENST00000465457 MAP3K9P80192 1104 aa16.93■□□□□ 0.3
HDAC6-215ENST00000465457 ATP8B2P98198 1209 aa16.93■□□□□ 0.3
HDAC6-215ENST00000465457 NEXNQ0ZGT2 675 aa16.93■□□□□ 0.3
HDAC6-215ENST00000465457 ZNF804AQ7Z570 1209 aa16.93■□□□□ 0.3
HDAC6-215ENST00000465457 ZKSCAN4Q969J2 545 aaPredicted RBP16.93■□□□□ 0.3
HDAC6-215ENST00000465457 PLA2G12BQ9BX93 195 aa16.93■□□□□ 0.3
HDAC6-215ENST00000465457 USP44Q9H0E7 712 aa16.93■□□□□ 0.3
HDAC6-215ENST00000465457 TTF2Q9UNY4 1162 aaKnown RBP16.93■□□□□ 0.3
HDAC6-215ENST00000465457 CSADQ9Y600 493 aa16.93■□□□□ 0.3
HDAC6-215ENST00000465457 ADGRA2Q96PE1 1338 aa16.93■□□□□ 0.3
HDAC6-215ENST00000465457 TNFAIP1Q13829 316 aa16.92■□□□□ 0.3
HDAC6-215ENST00000465457 GCKRQ14397 625 aa16.92■□□□□ 0.3
HDAC6-215ENST00000465457 KIF22Q14807 665 aa16.92■□□□□ 0.3
HDAC6-215ENST00000465457 LNPKQ9C0E8 428 aa16.92■□□□□ 0.3
HDAC6-215ENST00000465457 SRRDQ9UH36 339 aa16.92■□□□□ 0.3
HDAC6-215ENST00000465457 RIPOR2Q9Y4F9 1068 aa16.92■□□□□ 0.3
HDAC6-215ENST00000465457 DOCK3Q8IZD9 2030 aa16.91■□□□□ 0.3
HDAC6-215ENST00000465457 FARP2O94887 1054 aaPredicted RBP16.91■□□□□ 0.3
HDAC6-215ENST00000465457 GRK4P32298 578 aa16.91■□□□□ 0.3
HDAC6-215ENST00000465457 PSMC4P43686 418 aa16.91■□□□□ 0.3
HDAC6-215ENST00000465457 BMP2KLQ5H9B9 411 aa16.91■□□□□ 0.3
HDAC6-215ENST00000465457 MFSD14BQ5SR56 506 aa16.91■□□□□ 0.3
HDAC6-215ENST00000465457 C17orf99Q6UX52 265 aa16.91■□□□□ 0.3
HDAC6-215ENST00000465457 UPF2Q9HAU5 1272 aaKnown RBP16.91■□□□□ 0.3
HDAC6-215ENST00000465457 VCANP13611 3396 aa16.91■□□□□ 0.3
HDAC6-215ENST00000465457 GJB1P08034 283 aa16.9■□□□□ 0.3
HDAC6-215ENST00000465457 CETPP11597 493 aa16.9■□□□□ 0.3
HDAC6-215ENST00000465457 ZNF594Q96JF6 807 aaPredicted RBP16.9■□□□□ 0.3
HDAC6-215ENST00000465457 WRNIP1Q96S55 665 aa16.9■□□□□ 0.3
HDAC6-215ENST00000465457 HTATIP2Q9BUP3 242 aa16.9■□□□□ 0.3
HDAC6-215ENST00000465457 RNF208Q9H0X6 261 aa16.9■□□□□ 0.3
HDAC6-215ENST00000465457 UNC93B1Q9H1C4 597 aa16.9■□□□□ 0.3
HDAC6-215ENST00000465457 STAP2Q9UGK3 403 aa16.9■□□□□ 0.3
HDAC6-215ENST00000465457 UTYO14607 1347 aa16.9■□□□□ 0.3
HDAC6-215ENST00000465457 MYPNQ86TC9 1320 aa16.9■□□□□ 0.3
HDAC6-215ENST00000465457 ANKRD18BA2A2Z9 1011 aa16.89■□□□□ 0.29
HDAC6-215ENST00000465457 GNRH1P01148 92 aa16.89■□□□□ 0.29
HDAC6-215ENST00000465457 CRKP46108 304 aa16.89■□□□□ 0.29
HDAC6-215ENST00000465457 PRKCZQ05513 592 aa16.89■□□□□ 0.29
HDAC6-215ENST00000465457 MTX1Q13505 466 aa16.89■□□□□ 0.29
HDAC6-215ENST00000465457 Q7L0L9 218 aa16.89■□□□□ 0.29
HDAC6-215ENST00000465457 RAET1EQ8TD07 263 aa16.89■□□□□ 0.29
HDAC6-215ENST00000465457 U2AF1L4Q8WU68 220 aaKnown RBP16.89■□□□□ 0.29
HDAC6-215ENST00000465457 DDRGK1Q96HY6 314 aa16.89■□□□□ 0.29
HDAC6-215ENST00000465457 SERPINA10Q9UK55 444 aa16.89■□□□□ 0.29
HDAC6-215ENST00000465457 LRRFIP2Q9Y608 721 aaKnown RBP16.89■□□□□ 0.29
HDAC6-215ENST00000465457 FAM205AQ6ZU69 1335 aa16.89■□□□□ 0.29
HDAC6-215ENST00000465457 PTPRFP10586 1907 aa16.88■□□□□ 0.29
HDAC6-215ENST00000465457 AK9Q5TCS8 1911 aa16.88■□□□□ 0.29
HDAC6-215ENST00000465457 GYG1P46976 350 aa16.88■□□□□ 0.29
HDAC6-215ENST00000465457 PRMT2P55345 433 aa16.88■□□□□ 0.29
HDAC6-215ENST00000465457 SNAPC2Q13487 334 aa16.88■□□□□ 0.29
HDAC6-215ENST00000465457 HSP90AB4PQ58FF6 505 aa16.88■□□□□ 0.29
HDAC6-215ENST00000465457 ERO1BQ86YB8 467 aa16.88■□□□□ 0.29
HDAC6-215ENST00000465457 SSH3Q8TE77 659 aa16.88■□□□□ 0.29
HDAC6-215ENST00000465457 C9orf78Q9NZ63 289 aaPredicted RBP16.88■□□□□ 0.29
HDAC6-215ENST00000465457 GABRQQ9UN88 632 aa16.88■□□□□ 0.29
HDAC6-215ENST00000465457 EYSQ5T1H1 3165 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms