RNA–Protein interactions for RNA: ENST00000464800.5

MCF2L-220, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 720 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-220ENST00000464800 PPATQ06203 517 aa18.35■□□□□ 0.53
MCF2L-220ENST00000464800 PUM3Q15397 648 aaKnown RBP18.35■□□□□ 0.53
MCF2L-220ENST00000464800 HHIPL2Q6UWX4 724 aa18.35■□□□□ 0.53
MCF2L-220ENST00000464800 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.35■□□□□ 0.53
MCF2L-220ENST00000464800 MGAMO43451 1857 aa18.35■□□□□ 0.53
MCF2L-220ENST00000464800 DOCK2Q92608 1830 aa18.35■□□□□ 0.53
MCF2L-220ENST00000464800 H0YGN5 161 aa18.34■□□□□ 0.53
MCF2L-220ENST00000464800 IFIT1P09914 478 aaKnown RBP18.34■□□□□ 0.53
MCF2L-220ENST00000464800 C17orf99Q6UX52 265 aa18.34■□□□□ 0.53
MCF2L-220ENST00000464800 MIGA2Q7L4E1 593 aa18.34■□□□□ 0.53
MCF2L-220ENST00000464800 ANKRD23Q86SG2 305 aa18.34■□□□□ 0.53
MCF2L-220ENST00000464800 CPA4Q9UI42 421 aa18.34■□□□□ 0.53
MCF2L-220ENST00000464800 ECM2O94769 699 aaPredicted RBP18.33■□□□□ 0.52
MCF2L-220ENST00000464800 INPP5BP32019 993 aa18.33■□□□□ 0.52
MCF2L-220ENST00000464800 KLHDC4Q8TBB5 520 aa18.33■□□□□ 0.52
MCF2L-220ENST00000464800 SRRDQ9UH36 339 aa18.33■□□□□ 0.52
MCF2L-220ENST00000464800 ADGRA2Q96PE1 1338 aa18.32■□□□□ 0.52
MCF2L-220ENST00000464800 PDHXO00330 501 aa18.32■□□□□ 0.52
MCF2L-220ENST00000464800 HOXD10P28358 340 aa18.32■□□□□ 0.52
MCF2L-220ENST00000464800 PSMC4P43686 418 aa18.32■□□□□ 0.52
MCF2L-220ENST00000464800 WDR66Q8TBY9 1149 aa18.32■□□□□ 0.52
MCF2L-220ENST00000464800 FAM151AQ8WW52 585 aa18.32■□□□□ 0.52
MCF2L-220ENST00000464800 SHISA4Q96DD7 197 aa18.32■□□□□ 0.52
MCF2L-220ENST00000464800 TRIM47Q96LD4 638 aa18.32■□□□□ 0.52
MCF2L-220ENST00000464800 TRIOBPQ9H2D6 2365 aa18.32■□□□□ 0.52
MCF2L-220ENST00000464800 SLC5A1P13866 664 aa18.31■□□□□ 0.52
MCF2L-220ENST00000464800 FGFR2P21802 821 aa18.31■□□□□ 0.52
MCF2L-220ENST00000464800 CTGFP29279 349 aa18.31■□□□□ 0.52
MCF2L-220ENST00000464800 MTFR1Q15390 333 aa18.31■□□□□ 0.52
MCF2L-220ENST00000464800 RAET1EQ8TD07 263 aa18.31■□□□□ 0.52
MCF2L-220ENST00000464800 KCNH4Q9UQ05 1017 aa18.31■□□□□ 0.52
MCF2L-220ENST00000464800 PTPRCP08575 1304 aa18.3■□□□□ 0.52
MCF2L-220ENST00000464800 MYPNQ86TC9 1320 aa18.3■□□□□ 0.52
MCF2L-220ENST00000464800 ANP32CO43423 234 aa18.3■□□□□ 0.52
MCF2L-220ENST00000464800 FMNL1O95466 1100 aaPredicted RBP18.3■□□□□ 0.52
MCF2L-220ENST00000464800 OSBPP22059 807 aa18.3■□□□□ 0.52
MCF2L-220ENST00000464800 GRK4P32298 578 aa18.3■□□□□ 0.52
MCF2L-220ENST00000464800 ZEB1P37275 1124 aaPredicted RBP18.3■□□□□ 0.52
MCF2L-220ENST00000464800 TCP10Q12799 353 aa18.3■□□□□ 0.52
MCF2L-220ENST00000464800 NKX2-3Q8TAU0 364 aa18.3■□□□□ 0.52
MCF2L-220ENST00000464800 ZNF112Q9UJU3 913 aa18.3■□□□□ 0.52
MCF2L-220ENST00000464800 DAGLAQ9Y4D2 1042 aa18.3■□□□□ 0.52
MCF2L-220ENST00000464800 NOL9Q5SY16 702 aaKnown RBP18.29■□□□□ 0.52
MCF2L-220ENST00000464800 CDC42EP5Q6NZY7 148 aa18.29■□□□□ 0.52
MCF2L-220ENST00000464800 CHRDL2Q6WN34 429 aa18.29■□□□□ 0.52
MCF2L-220ENST00000464800 LPIN2Q92539 896 aa18.29■□□□□ 0.52
MCF2L-220ENST00000464800 DPF3Q92784 378 aa18.29■□□□□ 0.52
MCF2L-220ENST00000464800 PARK7Q99497 189 aaKnown RBP18.29■□□□□ 0.52
MCF2L-220ENST00000464800 MYH2Q9UKX2 1941 aa18.28■□□□□ 0.52
MCF2L-220ENST00000464800 DIXDC1Q155Q3 683 aa18.28■□□□□ 0.52
MCF2L-220ENST00000464800 MRPL50Q8N5N7 158 aaKnown RBP18.28■□□□□ 0.52
MCF2L-220ENST00000464800 PTPRFP10586 1907 aa18.27■□□□□ 0.52
MCF2L-220ENST00000464800 DOCK1Q14185 1865 aa18.27■□□□□ 0.52
MCF2L-220ENST00000464800 EYA2O00167 538 aa18.27■□□□□ 0.52
MCF2L-220ENST00000464800 CCL5P13501 91 aa18.27■□□□□ 0.52
MCF2L-220ENST00000464800 FCGRTP55899 365 aa18.27■□□□□ 0.52
MCF2L-220ENST00000464800 NFIAQ12857 509 aa18.27■□□□□ 0.52
MCF2L-220ENST00000464800 MOGSQ13724 837 aa18.27■□□□□ 0.52
MCF2L-220ENST00000464800 USP44Q9H0E7 712 aa18.27■□□□□ 0.52
MCF2L-220ENST00000464800 BIN2Q9UBW5 565 aaPredicted RBP18.27■□□□□ 0.52
MCF2L-220ENST00000464800 GJB1P08034 283 aa18.26■□□□□ 0.51
MCF2L-220ENST00000464800 PRDX5P30044 214 aa18.26■□□□□ 0.51
MCF2L-220ENST00000464800 GJA8P48165 433 aa18.26■□□□□ 0.51
MCF2L-220ENST00000464800 UBXN2AP68543 259 aa18.26■□□□□ 0.51
MCF2L-220ENST00000464800 HTATIP2Q9BUP3 242 aa18.26■□□□□ 0.51
MCF2L-220ENST00000464800 RNF208Q9H0X6 261 aa18.26■□□□□ 0.51
MCF2L-220ENST00000464800 FAM198AQ9UFP1 575 aa18.26■□□□□ 0.51
MCF2L-220ENST00000464800 LDHBP07195 334 aaKnown RBP18.25■□□□□ 0.51
MCF2L-220ENST00000464800 RFX5P48382 616 aaPredicted RBP18.25■□□□□ 0.51
MCF2L-220ENST00000464800 PRKCZQ05513 592 aa18.25■□□□□ 0.51
MCF2L-220ENST00000464800 FAM9BQ8IZU0 186 aa18.25■□□□□ 0.51
MCF2L-220ENST00000464800 SLAIN1Q8ND83 568 aa18.25■□□□□ 0.51
MCF2L-220ENST00000464800 USP40Q9NVE5 1235 aa18.25■□□□□ 0.51
MCF2L-220ENST00000464800 GNL3LQ9NVN8 582 aaKnown RBP18.25■□□□□ 0.51
MCF2L-220ENST00000464800 PHIPQ8WWQ0 1821 aa18.24■□□□□ 0.51
MCF2L-220ENST00000464800 CXCL11O14625 94 aa18.24■□□□□ 0.51
MCF2L-220ENST00000464800 CYP2C8P10632 490 aa18.24■□□□□ 0.51
MCF2L-220ENST00000464800 BCRP11274 1271 aa18.24■□□□□ 0.51
MCF2L-220ENST00000464800 GPAT2Q6NUI2 795 aa18.24■□□□□ 0.51
MCF2L-220ENST00000464800 UBE2Q1Q7Z7E8 422 aa18.24■□□□□ 0.51
MCF2L-220ENST00000464800 RBM27Q9P2N5 1060 aaKnown RBP18.24■□□□□ 0.51
MCF2L-220ENST00000464800 ZNF521Q96K83 1311 aa18.23■□□□□ 0.51
MCF2L-220ENST00000464800 SALL1Q9NSC2 1324 aa18.23■□□□□ 0.51
MCF2L-220ENST00000464800 ATRNL1Q5VV63 1379 aa18.23■□□□□ 0.51
MCF2L-220ENST00000464800 ATP2B3Q16720 1220 aa18.23■□□□□ 0.51
MCF2L-220ENST00000464800 ATG9AQ7Z3C6 839 aa18.23■□□□□ 0.51
MCF2L-220ENST00000464800 SCYL3Q8IZE3 742 aa18.23■□□□□ 0.51
MCF2L-220ENST00000464800 PICK1Q9NRD5 415 aa18.23■□□□□ 0.51
MCF2L-220ENST00000464800 FARP2O94887 1054 aaPredicted RBP18.22■□□□□ 0.51
MCF2L-220ENST00000464800 FASTKD5Q7L8L6 764 aaKnown RBP18.22■□□□□ 0.51
MCF2L-220ENST00000464800 U2AF1L4Q8WU68 220 aaKnown RBP18.22■□□□□ 0.51
MCF2L-220ENST00000464800 SIL1Q9H173 461 aa18.22■□□□□ 0.51
MCF2L-220ENST00000464800 RFX7Q2KHR2 1363 aa18.21■□□□□ 0.51
MCF2L-220ENST00000464800 A0A0G2JLL6 359 aaPredicted RBP18.21■□□□□ 0.51
MCF2L-220ENST00000464800 SEMA3EO15041 775 aa18.21■□□□□ 0.51
MCF2L-220ENST00000464800 CIAO1O76071 339 aa18.21■□□□□ 0.51
MCF2L-220ENST00000464800 RGS3P49796 1198 aa18.21■□□□□ 0.51
MCF2L-220ENST00000464800 PRRT2Q7Z6L0 340 aaPredicted RBP18.21■□□□□ 0.51
MCF2L-220ENST00000464800 ZFPM1Q8IX07 1006 aa18.21■□□□□ 0.51
MCF2L-220ENST00000464800 SSH1Q8WYL5 1049 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms