RNA–Protein interactions for RNA: ENST00000464139.5

TUBGCP3-204, Transcript of tubulin gamma complex associated protein 3, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP3, Length 2,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-204ENST00000464139 PTF1AQ7RTS3 328 aa23.76■■□□□ 1.39
TUBGCP3-204ENST00000464139 TMEM87BQ96K49 555 aa23.76■■□□□ 1.39
TUBGCP3-204ENST00000464139 CDC5LQ99459 802 aaKnown RBP23.76■■□□□ 1.39
TUBGCP3-204ENST00000464139 TAF1P21675 1872 aa23.76■■□□□ 1.39
TUBGCP3-204ENST00000464139 GYG1P46976 350 aa23.75■■□□□ 1.39
TUBGCP3-204ENST00000464139 FAM160A1Q05DH4 1040 aa23.75■■□□□ 1.39
TUBGCP3-204ENST00000464139 LINC00301Q8NCQ3 95 aa23.75■■□□□ 1.39
TUBGCP3-204ENST00000464139 R3HCC1Q9Y3T6 440 aaKnown RBP23.75■■□□□ 1.39
TUBGCP3-204ENST00000464139 KIF23Q02241 960 aaPredicted RBP23.75■■□□□ 1.39
TUBGCP3-204ENST00000464139 STK38Q15208 465 aa23.75■■□□□ 1.39
TUBGCP3-204ENST00000464139 MYSM1Q5VVJ2 828 aa23.75■■□□□ 1.39
TUBGCP3-204ENST00000464139 CLEC4GQ6UXB4 293 aa23.75■■□□□ 1.39
TUBGCP3-204ENST00000464139 LAMB2P55268 1798 aa23.75■■□□□ 1.39
TUBGCP3-204ENST00000464139 ZBTB43O43298 467 aa23.74■■□□□ 1.39
TUBGCP3-204ENST00000464139 KINO60870 393 aaKnown RBP23.74■■□□□ 1.39
TUBGCP3-204ENST00000464139 TDO2P48775 406 aa23.74■■□□□ 1.39
TUBGCP3-204ENST00000464139 ALG1Q9BT22 464 aa23.74■■□□□ 1.39
TUBGCP3-204ENST00000464139 CICQ96RK0 1608 aaPredicted RBP23.74■■□□□ 1.39
TUBGCP3-204ENST00000464139 IFIT3O14879 490 aaKnown RBP23.74■■□□□ 1.39
TUBGCP3-204ENST00000464139 SF3A1Q15459 793 aaKnown RBP23.74■■□□□ 1.39
TUBGCP3-204ENST00000464139 RRP12Q5JTH9 1297 aaKnown RBP23.74■■□□□ 1.39
TUBGCP3-204ENST00000464139 AKNAD1Q5T1N1 836 aa23.74■■□□□ 1.39
TUBGCP3-204ENST00000464139 ANKRD18AQ8IVF6 992 aa23.74■■□□□ 1.39
TUBGCP3-204ENST00000464139 ABCF2Q9UG63 623 aa23.74■■□□□ 1.39
TUBGCP3-204ENST00000464139 COL5A3P25940 1745 aaPredicted RBP23.74■■□□□ 1.39
TUBGCP3-204ENST00000464139 A0A087WWV3 80 aa23.73■■□□□ 1.39
TUBGCP3-204ENST00000464139 A0A1B0GVL5 298 aa23.73■■□□□ 1.39
TUBGCP3-204ENST00000464139 BRAPQ7Z569 592 aa23.73■■□□□ 1.39
TUBGCP3-204ENST00000464139 ERCC4Q92889 916 aaPredicted RBP23.73■■□□□ 1.39
TUBGCP3-204ENST00000464139 TOMM22Q9NS69 142 aa23.73■■□□□ 1.39
TUBGCP3-204ENST00000464139 BCL9LQ86UU0 1499 aa23.73■■□□□ 1.39
TUBGCP3-204ENST00000464139 ADALQ6DHV7 355 aa23.73■■□□□ 1.39
TUBGCP3-204ENST00000464139 MFSD6Q6ZSS7 791 aa23.73■■□□□ 1.39
TUBGCP3-204ENST00000464139 ADGRA1Q86SQ6 560 aa23.73■■□□□ 1.39
TUBGCP3-204ENST00000464139 GOLGA8AA7E2F4 631 aa23.72■■□□□ 1.39
TUBGCP3-204ENST00000464139 CTAGE5O15320 804 aa23.72■■□□□ 1.39
TUBGCP3-204ENST00000464139 C17orf53Q8N3J3 647 aaPredicted RBP23.72■■□□□ 1.39
TUBGCP3-204ENST00000464139 MRPS27Q92552 414 aaKnown RBP23.72■■□□□ 1.39
TUBGCP3-204ENST00000464139 ZKSCAN3Q9BRR0 538 aa23.72■■□□□ 1.39
TUBGCP3-204ENST00000464139 FAM217BQ9NTX9 383 aaPredicted RBP23.72■■□□□ 1.39
TUBGCP3-204ENST00000464139 POLR3EQ9NVU0 708 aa23.72■■□□□ 1.39
TUBGCP3-204ENST00000464139 CHD4Q14839 1912 aa23.72■■□□□ 1.39
TUBGCP3-204ENST00000464139 TOM1O60784 492 aa23.72■■□□□ 1.39
TUBGCP3-204ENST00000464139 CYP7A1P22680 504 aa23.72■■□□□ 1.39
TUBGCP3-204ENST00000464139 SYNE3Q6ZMZ3 975 aa23.72■■□□□ 1.39
TUBGCP3-204ENST00000464139 C11orf57Q6ZUT1 292 aaPredicted RBP23.72■■□□□ 1.39
TUBGCP3-204ENST00000464139 SGMS1Q86VZ5 419 aa23.72■■□□□ 1.39
TUBGCP3-204ENST00000464139 NACAP1Q9BZK3 213 aa23.72■■□□□ 1.39
TUBGCP3-204ENST00000464139 BCORQ6W2J9 1755 aa23.72■■□□□ 1.39
TUBGCP3-204ENST00000464139 PNPLA7Q6ZV29 1317 aa23.71■■□□□ 1.39
TUBGCP3-204ENST00000464139 UBE2Q2LH0YL09 131 aa23.71■■□□□ 1.39
TUBGCP3-204ENST00000464139 CDKL5O76039 1030 aa23.71■■□□□ 1.39
TUBGCP3-204ENST00000464139 GTF2E1P29083 439 aaPredicted RBP23.71■■□□□ 1.39
TUBGCP3-204ENST00000464139 TDRD7Q8NHU6 1098 aaKnown RBP23.71■■□□□ 1.39
TUBGCP3-204ENST00000464139 C8orf37Q96NL8 207 aa23.71■■□□□ 1.39
TUBGCP3-204ENST00000464139 SPTLC2O15270 562 aa23.71■■□□□ 1.39
TUBGCP3-204ENST00000464139 RANBP6O60518 1105 aaKnown RBP23.71■■□□□ 1.39
TUBGCP3-204ENST00000464139 NTRK3Q16288 839 aa23.71■■□□□ 1.39
TUBGCP3-204ENST00000464139 TBC1D9BQ66K14 1250 aa23.71■■□□□ 1.39
TUBGCP3-204ENST00000464139 KRT40Q6A162 431 aa23.71■■□□□ 1.39
TUBGCP3-204ENST00000464139 CPLX2Q6PUV4 134 aaKnown RBP23.71■■□□□ 1.39
TUBGCP3-204ENST00000464139 FMR1NBQ8N0W7 255 aaPredicted RBP23.71■■□□□ 1.39
TUBGCP3-204ENST00000464139 SLC12A7Q9Y666 1083 aa23.71■■□□□ 1.39
TUBGCP3-204ENST00000464139 GNAT2P19087 354 aa23.7■■□□□ 1.38
TUBGCP3-204ENST00000464139 NDUFA8P51970 172 aa23.7■■□□□ 1.38
TUBGCP3-204ENST00000464139 SF3B3Q15393 1217 aaKnown RBP23.7■■□□□ 1.38
TUBGCP3-204ENST00000464139 CNNM2Q9H8M5 875 aa23.7■■□□□ 1.38
TUBGCP3-204ENST00000464139 RAI14Q9P0K7 980 aa23.7■■□□□ 1.38
TUBGCP3-204ENST00000464139 CCDC69A6NI79 296 aa23.7■■□□□ 1.38
TUBGCP3-204ENST00000464139 YEATS4O95619 227 aa23.7■■□□□ 1.38
TUBGCP3-204ENST00000464139 LIFRP42702 1097 aa23.7■■□□□ 1.38
TUBGCP3-204ENST00000464139 KCNG4Q8TDN1 519 aa23.7■■□□□ 1.38
TUBGCP3-204ENST00000464139 CELF1Q92879 486 aaKnown RBP23.7■■□□□ 1.38
TUBGCP3-204ENST00000464139 KRT23Q9C075 422 aa23.7■■□□□ 1.38
TUBGCP3-204ENST00000464139 IARSP41252 1262 aaKnown RBP23.69■■□□□ 1.38
TUBGCP3-204ENST00000464139 ANO1Q5XXA6 986 aa23.69■■□□□ 1.38
TUBGCP3-204ENST00000464139 SDR42E1Q8WUS8 393 aa23.69■■□□□ 1.38
TUBGCP3-204ENST00000464139 PIBF1Q8WXW3 757 aa23.69■■□□□ 1.38
TUBGCP3-204ENST00000464139 NGLY1Q96IV0 654 aa23.69■■□□□ 1.38
TUBGCP3-204ENST00000464139 TRIM5Q9C035 493 aa23.69■■□□□ 1.38
TUBGCP3-204ENST00000464139 KCNF1Q9H3M0 494 aa23.69■■□□□ 1.38
TUBGCP3-204ENST00000464139 BCL2L12Q9HB09 334 aa23.69■■□□□ 1.38
TUBGCP3-204ENST00000464139 MINPP1Q9UNW1 487 aa23.69■■□□□ 1.38
TUBGCP3-204ENST00000464139 ZNF804BA4D1E1 1349 aa23.69■■□□□ 1.38
TUBGCP3-204ENST00000464139 A0A1W2PQ27 194 aa23.69■■□□□ 1.38
TUBGCP3-204ENST00000464139 A0A1W2PQ64 194 aa23.69■■□□□ 1.38
TUBGCP3-204ENST00000464139 A0A1W2PQD8 194 aa23.69■■□□□ 1.38
TUBGCP3-204ENST00000464139 STX1AQ16623 288 aa23.69■■□□□ 1.38
TUBGCP3-204ENST00000464139 STAG1Q8WVM7 1258 aa23.69■■□□□ 1.38
TUBGCP3-204ENST00000464139 BSDC1Q9NW68 430 aaPredicted RBP23.69■■□□□ 1.38
TUBGCP3-204ENST00000464139 VPS37DQ86XT2 251 aa23.68■■□□□ 1.38
TUBGCP3-204ENST00000464139 IQCB1Q15051 598 aa23.68■■□□□ 1.38
TUBGCP3-204ENST00000464139 FBXW7Q969H0 707 aa23.68■■□□□ 1.38
TUBGCP3-204ENST00000464139 GNL3LQ9NVN8 582 aaKnown RBP23.68■■□□□ 1.38
TUBGCP3-204ENST00000464139 SRP68Q9UHB9 627 aaKnown RBP23.68■■□□□ 1.38
TUBGCP3-204ENST00000464139 COL1A1P02452 1464 aaPredicted RBP23.67■■□□□ 1.38
TUBGCP3-204ENST00000464139 SMIM22K7EJ46 135 aa23.67■■□□□ 1.38
TUBGCP3-204ENST00000464139 NOLC1Q14978 699 aaKnown RBP eCLIP23.67■■□□□ 1.38
TUBGCP3-204ENST00000464139 CCDC24Q8N4L8 307 aa23.67■■□□□ 1.38
TUBGCP3-204ENST00000464139 SDF4Q9BRK5 362 aa23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms