RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 AIDAQ96BJ3 306 aa17.22■□□□□ 0.35
COL6A1-202ENST00000463060 DSCC1Q9BVC3 393 aa17.22■□□□□ 0.35
COL6A1-202ENST00000463060 PCDHAC2Q9Y5I4 1007 aa17.22■□□□□ 0.35
COL6A1-202ENST00000463060 ADAMTSL1Q8N6G6 1762 aa17.21■□□□□ 0.35
COL6A1-202ENST00000463060 DCAF8L1A6NGE4 600 aa17.21■□□□□ 0.35
COL6A1-202ENST00000463060 GSG1L2A8MUP6 293 aa17.21■□□□□ 0.35
COL6A1-202ENST00000463060 PATL2C9JE40 543 aaKnown RBP17.21■□□□□ 0.35
COL6A1-202ENST00000463060 PRKAB2O43741 272 aa17.21■□□□□ 0.35
COL6A1-202ENST00000463060 BAG3O95817 575 aa17.21■□□□□ 0.35
COL6A1-202ENST00000463060 BTDP43251 543 aa17.21■□□□□ 0.35
COL6A1-202ENST00000463060 ALX1Q15699 326 aa17.21■□□□□ 0.35
COL6A1-202ENST00000463060 CERS3Q8IU89 383 aa17.21■□□□□ 0.35
COL6A1-202ENST00000463060 ANO2Q9NQ90 1003 aa17.21■□□□□ 0.35
COL6A1-202ENST00000463060 AATFQ9NY61 560 aaKnown RBP eCLIP17.21■□□□□ 0.35
COL6A1-202ENST00000463060 MKRN1Q9UHC7 482 aaKnown RBP17.21■□□□□ 0.35
COL6A1-202ENST00000463060 GJA3Q9Y6H8 435 aa17.21■□□□□ 0.35
COL6A1-202ENST00000463060 RPAP1Q9BWH6 1393 aaPredicted RBP17.2■□□□□ 0.34
COL6A1-202ENST00000463060 SHTN1A0MZ66 631 aa17.2■□□□□ 0.34
COL6A1-202ENST00000463060 GNAT2P19087 354 aa17.2■□□□□ 0.34
COL6A1-202ENST00000463060 CFAP100Q494V2 611 aa17.2■□□□□ 0.34
COL6A1-202ENST00000463060 KIAA1211Q6ZU35 1233 aa17.2■□□□□ 0.34
COL6A1-202ENST00000463060 SH3RF3Q8TEJ3 882 aaPredicted RBP17.2■□□□□ 0.34
COL6A1-202ENST00000463060 PRMT6Q96LA8 375 aaPredicted RBP17.2■□□□□ 0.34
COL6A1-202ENST00000463060 DDNO94850 711 aaPredicted RBP17.19■□□□□ 0.34
COL6A1-202ENST00000463060 NECTIN1Q15223 517 aa17.19■□□□□ 0.34
COL6A1-202ENST00000463060 CDC42EP5Q6NZY7 148 aa17.19■□□□□ 0.34
COL6A1-202ENST00000463060 OGFOD1Q8N543 542 aa17.19■□□□□ 0.34
COL6A1-202ENST00000463060 KCNB2Q92953 911 aa17.19■□□□□ 0.34
COL6A1-202ENST00000463060 EPB41L4AQ9HCS5 686 aaPredicted RBP17.19■□□□□ 0.34
COL6A1-202ENST00000463060 GPRC5DQ9NZD1 345 aa17.19■□□□□ 0.34
COL6A1-202ENST00000463060 CNOT7Q9UIV1 285 aaKnown RBP17.19■□□□□ 0.34
COL6A1-202ENST00000463060 HDAC9Q9UKV0 1011 aa17.19■□□□□ 0.34
COL6A1-202ENST00000463060 SPDYE2BA6NHP3 402 aa17.18■□□□□ 0.34
COL6A1-202ENST00000463060 FGAP02671 866 aa17.18■□□□□ 0.34
COL6A1-202ENST00000463060 SPDYE6P0CI01 402 aa17.18■□□□□ 0.34
COL6A1-202ENST00000463060 PLCG2P16885 1265 aa17.18■□□□□ 0.34
COL6A1-202ENST00000463060 GIMAP6Q6P9H5 292 aa17.18■□□□□ 0.34
COL6A1-202ENST00000463060 IFNL3Q8IZI9 196 aa17.18■□□□□ 0.34
COL6A1-202ENST00000463060 L3MBTL3Q96JM7 780 aaPredicted RBP17.18■□□□□ 0.34
COL6A1-202ENST00000463060 CRNKL1Q9BZJ0 848 aaKnown RBP17.18■□□□□ 0.34
COL6A1-202ENST00000463060 MYOZ2Q9NPC6 264 aa17.18■□□□□ 0.34
COL6A1-202ENST00000463060 SLC4A4Q9Y6R1 1079 aa17.18■□□□□ 0.34
COL6A1-202ENST00000463060 ZMYM6O95789 1325 aa17.18■□□□□ 0.34
COL6A1-202ENST00000463060 GLTPD2A6NH11 291 aa17.17■□□□□ 0.34
COL6A1-202ENST00000463060 WDHD1O75717 1129 aaPredicted RBP17.17■□□□□ 0.34
COL6A1-202ENST00000463060 EGFRP00533 1210 aa17.17■□□□□ 0.34
COL6A1-202ENST00000463060 RBM25P49756 843 aaKnown RBP17.17■□□□□ 0.34
COL6A1-202ENST00000463060 MICALL2Q8IY33 904 aa17.17■□□□□ 0.34
COL6A1-202ENST00000463060 IL17RAQ96F46 866 aa17.17■□□□□ 0.34
COL6A1-202ENST00000463060 NOL10Q9BSC4 688 aaKnown RBP17.17■□□□□ 0.34
COL6A1-202ENST00000463060 ATP8A2Q9NTI2 1148 aa17.17■□□□□ 0.34
COL6A1-202ENST00000463060 USP40Q9NVE5 1235 aa17.17■□□□□ 0.34
COL6A1-202ENST00000463060 RBM8AQ9Y5S9 174 aaKnown RBP17.17■□□□□ 0.34
COL6A1-202ENST00000463060 CDK5RAP2Q96SN8 1893 aa17.16■□□□□ 0.34
COL6A1-202ENST00000463060 NPM3O75607 178 aaKnown RBP17.16■□□□□ 0.34
COL6A1-202ENST00000463060 HSPA4P34932 840 aa17.16■□□□□ 0.34
COL6A1-202ENST00000463060 DLGAP5Q15398 846 aa17.16■□□□□ 0.34
COL6A1-202ENST00000463060 DPY19L2Q6NUT2 758 aa17.16■□□□□ 0.34
COL6A1-202ENST00000463060 SDR42E1Q8WUS8 393 aa17.16■□□□□ 0.34
COL6A1-202ENST00000463060 TBC1D32Q96NH3 1257 aa17.16■□□□□ 0.34
COL6A1-202ENST00000463060 IDI2Q9BXS1 227 aa17.16■□□□□ 0.34
COL6A1-202ENST00000463060 U3KPZ7 1027 aaPredicted RBP17.16■□□□□ 0.34
COL6A1-202ENST00000463060 WNT10BO00744 389 aa17.15■□□□□ 0.34
COL6A1-202ENST00000463060 EPS15P42566 896 aa17.15■□□□□ 0.34
COL6A1-202ENST00000463060 RBM5P52756 815 aaKnown RBP eCLIP17.15■□□□□ 0.34
COL6A1-202ENST00000463060 TEX11Q8IYF3 940 aa17.15■□□□□ 0.34
COL6A1-202ENST00000463060 C22orf23Q9BZE7 217 aa17.15■□□□□ 0.34
COL6A1-202ENST00000463060 TDRD3Q9H7E2 651 aaKnown RBP17.15■□□□□ 0.34
COL6A1-202ENST00000463060 DCP1AQ9NPI6 582 aaPredicted RBP17.15■□□□□ 0.34
COL6A1-202ENST00000463060 FOCADQ5VW36 1801 aa17.14■□□□□ 0.34
COL6A1-202ENST00000463060 H7C1D1 291 aa17.14■□□□□ 0.33
COL6A1-202ENST00000463060 NBPF9Q3BBW0 867 aa17.14■□□□□ 0.33
COL6A1-202ENST00000463060 TSGA10IPQ3SY00 556 aa17.14■□□□□ 0.33
COL6A1-202ENST00000463060 CREB3L3Q68CJ9 461 aa17.14■□□□□ 0.33
COL6A1-202ENST00000463060 SAMD7Q7Z3H4 446 aa17.14■□□□□ 0.33
COL6A1-202ENST00000463060 TGFBRAP1Q8WUH2 860 aa17.14■□□□□ 0.33
COL6A1-202ENST00000463060 DDX4Q9NQI0 724 aaKnown RBP17.14■□□□□ 0.33
COL6A1-202ENST00000463060 ECM29Q5VYK3 1845 aa17.14■□□□□ 0.33
COL6A1-202ENST00000463060 POTECB2RU33 542 aa17.13■□□□□ 0.33
COL6A1-202ENST00000463060 APPP05067 770 aa17.13■□□□□ 0.33
COL6A1-202ENST00000463060 CYP21A2P08686 494 aa17.13■□□□□ 0.33
COL6A1-202ENST00000463060 HIRAP54198 1017 aaPredicted RBP17.13■□□□□ 0.33
COL6A1-202ENST00000463060 SPDYE2Q495Y8 402 aa17.13■□□□□ 0.33
COL6A1-202ENST00000463060 SBK1Q52WX2 424 aa17.13■□□□□ 0.33
COL6A1-202ENST00000463060 FKBP1CQ5VVH2 108 aa17.13■□□□□ 0.33
COL6A1-202ENST00000463060 CTR9Q6PD62 1173 aa17.13■□□□□ 0.33
COL6A1-202ENST00000463060 RASEFQ8IZ41 740 aa17.13■□□□□ 0.33
COL6A1-202ENST00000463060 KIF2CQ99661 725 aa17.13■□□□□ 0.33
COL6A1-202ENST00000463060 ZNF70Q9UC06 446 aaPredicted RBP17.13■□□□□ 0.33
COL6A1-202ENST00000463060 FAM198AQ9UFP1 575 aa17.13■□□□□ 0.33
COL6A1-202ENST00000463060 CTNNA3Q9UI47 895 aa17.13■□□□□ 0.33
COL6A1-202ENST00000463060 PALD1Q9ULE6 856 aa17.13■□□□□ 0.33
COL6A1-202ENST00000463060 TAF6LQ9Y6J9 622 aa17.13■□□□□ 0.33
COL6A1-202ENST00000463060 SLC27A2O14975 620 aa17.12■□□□□ 0.33
COL6A1-202ENST00000463060 NFIAQ12857 509 aa17.12■□□□□ 0.33
COL6A1-202ENST00000463060 TRPM4Q8TD43 1214 aa17.12■□□□□ 0.33
COL6A1-202ENST00000463060 NACAP1Q9BZK3 213 aa17.12■□□□□ 0.33
COL6A1-202ENST00000463060 NBPF3Q9H094 633 aa17.12■□□□□ 0.33
COL6A1-202ENST00000463060 UPF2Q9HAU5 1272 aaKnown RBP17.12■□□□□ 0.33
COL6A1-202ENST00000463060 ANAPC4Q9UJX5 808 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms