RNA–Protein interactions for RNA: ENST00000461660.1

ATP13A3-206, Transcript of ATPase 13A3, humanhuman

TSL 1 (best)

Gene ATP13A3, Length 3,517 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-206ENST00000461660 PNPLA7Q6ZV29 1317 aa4.83□□□□□ -1.64
ATP13A3-206ENST00000461660 RPAP1Q9BWH6 1393 aaPredicted RBP4.83□□□□□ -1.64
ATP13A3-206ENST00000461660 ZBTB43O43298 467 aa4.83□□□□□ -1.64
ATP13A3-206ENST00000461660 STX6O43752 255 aa4.83□□□□□ -1.64
ATP13A3-206ENST00000461660 IGSF3O75054 1194 aa4.83□□□□□ -1.64
ATP13A3-206ENST00000461660 ZBTB7AO95365 584 aa4.83□□□□□ -1.64
ATP13A3-206ENST00000461660 SRGNP10124 158 aa4.83□□□□□ -1.64
ATP13A3-206ENST00000461660 KLRK1P26718 216 aa4.83□□□□□ -1.64
ATP13A3-206ENST00000461660 PRDX5P30044 214 aa4.83□□□□□ -1.64
ATP13A3-206ENST00000461660 METAP2P50579 478 aaKnown RBP eCLIP4.83□□□□□ -1.64
ATP13A3-206ENST00000461660 MECOMQ03112 1051 aa4.83□□□□□ -1.64
ATP13A3-206ENST00000461660 RAB3GAP1Q15042 981 aa4.83□□□□□ -1.64
ATP13A3-206ENST00000461660 SF3A1Q15459 793 aaKnown RBP4.83□□□□□ -1.64
ATP13A3-206ENST00000461660 SLC4A8Q2Y0W8 1093 aa4.83□□□□□ -1.64
ATP13A3-206ENST00000461660 CRY2Q49AN0 593 aa4.83□□□□□ -1.64
ATP13A3-206ENST00000461660 TMTC2Q8N394 836 aa4.83□□□□□ -1.64
ATP13A3-206ENST00000461660 LARGE2Q8N3Y3 721 aa4.83□□□□□ -1.64
ATP13A3-206ENST00000461660 TTLL6Q8N841 843 aa4.83□□□□□ -1.64
ATP13A3-206ENST00000461660 TMEM87BQ96K49 555 aa4.83□□□□□ -1.64
ATP13A3-206ENST00000461660 ANGEL1Q9UNK9 670 aaKnown RBP4.83□□□□□ -1.64
ATP13A3-206ENST00000461660 USP17L12C9JPN9 530 aa4.82□□□□□ -1.64
ATP13A3-206ENST00000461660 USP17L21D6R901 530 aa4.82□□□□□ -1.64
ATP13A3-206ENST00000461660 PRKAB2O43741 272 aa4.82□□□□□ -1.64
ATP13A3-206ENST00000461660 TRAK2O60296 914 aa4.82□□□□□ -1.64
ATP13A3-206ENST00000461660 HLA-DOAP06340 250 aa4.82□□□□□ -1.64
ATP13A3-206ENST00000461660 XBP1P17861 261 aa4.82□□□□□ -1.64
ATP13A3-206ENST00000461660 CHRNA5P30532 468 aa4.82□□□□□ -1.64
ATP13A3-206ENST00000461660 DYNLL1P63167 89 aaKnown RBP4.82□□□□□ -1.64
ATP13A3-206ENST00000461660 CTDSPL2Q05D32 466 aa4.82□□□□□ -1.64
ATP13A3-206ENST00000461660 PPARAQ07869 468 aa4.82□□□□□ -1.64
ATP13A3-206ENST00000461660 CUL4AQ13619 759 aa4.82□□□□□ -1.64
ATP13A3-206ENST00000461660 CCDC93Q567U6 631 aa4.82□□□□□ -1.64
ATP13A3-206ENST00000461660 STYK1Q6J9G0 422 aa4.82□□□□□ -1.64
ATP13A3-206ENST00000461660 CATIPQ7Z7H3 387 aa4.82□□□□□ -1.64
ATP13A3-206ENST00000461660 RAB11FIP4Q86YS3 637 aa4.82□□□□□ -1.64
ATP13A3-206ENST00000461660 CRACR2BQ8N4Y2 399 aaPredicted RBP4.82□□□□□ -1.64
ATP13A3-206ENST00000461660 ANO8Q9HCE9 1232 aaPredicted RBP4.82□□□□□ -1.64
ATP13A3-206ENST00000461660 ATP8A2Q9NTI2 1148 aa4.82□□□□□ -1.64
ATP13A3-206ENST00000461660 TTF2Q9UNY4 1162 aaKnown RBP4.82□□□□□ -1.64
ATP13A3-206ENST00000461660 MTMR7Q9Y216 660 aa4.82□□□□□ -1.64
ATP13A3-206ENST00000461660 ATF5Q9Y2D1 282 aaPredicted RBP4.82□□□□□ -1.64
ATP13A3-206ENST00000461660 FIBPO43427 364 aa4.82□□□□□ -1.64
ATP13A3-206ENST00000461660 MBD3O95983 291 aa4.82□□□□□ -1.64
ATP13A3-206ENST00000461660 HOXD11P31277 338 aaPredicted RBP4.82□□□□□ -1.64
ATP13A3-206ENST00000461660 KRT85P78386 507 aa4.82□□□□□ -1.64
ATP13A3-206ENST00000461660 ZRSR1Q15695 479 aaKnown RBP4.82□□□□□ -1.64
ATP13A3-206ENST00000461660 ALX1Q15699 326 aa4.82□□□□□ -1.64
ATP13A3-206ENST00000461660 ME3Q16798 604 aa4.82□□□□□ -1.64
ATP13A3-206ENST00000461660 TSGA10IPQ3SY00 556 aa4.82□□□□□ -1.64
ATP13A3-206ENST00000461660 SOGA3Q5TF21 947 aa4.82□□□□□ -1.64
ATP13A3-206ENST00000461660 FERMT3Q86UX7 667 aa4.82□□□□□ -1.64
ATP13A3-206ENST00000461660 OGFOD1Q8N543 542 aa4.82□□□□□ -1.64
ATP13A3-206ENST00000461660 CTCFLQ8NI51 663 aaPredicted RBP4.82□□□□□ -1.64
ATP13A3-206ENST00000461660 CNKSR2Q8WXI2 1034 aa4.82□□□□□ -1.64
ATP13A3-206ENST00000461660 JDP2Q8WYK2 163 aa4.82□□□□□ -1.64
ATP13A3-206ENST00000461660 WASF1Q92558 559 aa4.82□□□□□ -1.64
ATP13A3-206ENST00000461660 ORC3Q9UBD5 711 aaPredicted RBP4.82□□□□□ -1.64
ATP13A3-206ENST00000461660 ARPP21Q9UBL0 812 aaPredicted RBP4.82□□□□□ -1.64
ATP13A3-206ENST00000461660 HDAC9Q9UKV0 1011 aa4.82□□□□□ -1.64
ATP13A3-206ENST00000461660 TPCN1Q9ULQ1 816 aa4.82□□□□□ -1.64
ATP13A3-206ENST00000461660 RAD21O60216 631 aa4.81□□□□□ -1.64
ATP13A3-206ENST00000461660 PRPF40AO75400 957 aaKnown RBP4.81□□□□□ -1.64
ATP13A3-206ENST00000461660 BAG4O95429 457 aaKnown RBP4.81□□□□□ -1.64
ATP13A3-206ENST00000461660 BTDP43251 543 aa4.81□□□□□ -1.64
ATP13A3-206ENST00000461660 PICALMQ13492 652 aa4.81□□□□□ -1.64
ATP13A3-206ENST00000461660 DIXDC1Q155Q3 683 aa4.81□□□□□ -1.64
ATP13A3-206ENST00000461660 TDRD7Q8NHU6 1098 aaKnown RBP4.81□□□□□ -1.64
ATP13A3-206ENST00000461660 TEKT1Q969V4 418 aa4.81□□□□□ -1.64
ATP13A3-206ENST00000461660 C8orf76Q96K31 380 aa4.81□□□□□ -1.64
ATP13A3-206ENST00000461660 TTC14Q96N46 770 aa4.81□□□□□ -1.64
ATP13A3-206ENST00000461660 CAMKK2Q96RR4 588 aa4.81□□□□□ -1.64
ATP13A3-206ENST00000461660 DBNDD1Q9H9R9 158 aa4.81□□□□□ -1.64
ATP13A3-206ENST00000461660 PDS5AQ29RF7 1337 aaKnown RBP4.81□□□□□ -1.64
ATP13A3-206ENST00000461660 C4BP0C0L5 1744 aa4.81□□□□□ -1.64
ATP13A3-206ENST00000461660 NUP188Q5SRE5 1749 aa4.81□□□□□ -1.64
ATP13A3-206ENST00000461660 PTPDC1A2A3K4 754 aa4.81□□□□□ -1.64
ATP13A3-206ENST00000461660 PRDM1O75626 825 aa4.81□□□□□ -1.64
ATP13A3-206ENST00000461660 ZSCAN22P10073 491 aaPredicted RBP4.81□□□□□ -1.64
ATP13A3-206ENST00000461660 PCP11498 1178 aaKnown RBP4.81□□□□□ -1.64
ATP13A3-206ENST00000461660 IARSP41252 1262 aaKnown RBP4.81□□□□□ -1.64
ATP13A3-206ENST00000461660 ATP2B2Q01814 1243 aa4.81□□□□□ -1.64
ATP13A3-206ENST00000461660 RTN1Q16799 776 aa4.81□□□□□ -1.64
ATP13A3-206ENST00000461660 CCDC178Q5BJE1 867 aa4.81□□□□□ -1.64
ATP13A3-206ENST00000461660 IFIT1BQ5T764 474 aaKnown RBP4.81□□□□□ -1.64
ATP13A3-206ENST00000461660 TTC6Q86TZ1 520 aa4.81□□□□□ -1.64
ATP13A3-206ENST00000461660 TXNRD3Q86VQ6 643 aa4.81□□□□□ -1.64
ATP13A3-206ENST00000461660 MAPKAPK5Q8IW41 473 aa4.81□□□□□ -1.64
ATP13A3-206ENST00000461660 NIM1KQ8IY84 436 aa4.81□□□□□ -1.64
ATP13A3-206ENST00000461660 CCDC144CPQ8IYA2 1237 aa4.81□□□□□ -1.64
ATP13A3-206ENST00000461660 TGFBRAP1Q8WUH2 860 aa4.81□□□□□ -1.64
ATP13A3-206ENST00000461660 KCNB2Q92953 911 aa4.81□□□□□ -1.64
ATP13A3-206ENST00000461660 GTF3C6Q969F1 213 aa4.81□□□□□ -1.64
ATP13A3-206ENST00000461660 LLPHQ9BRT6 129 aaKnown RBP4.81□□□□□ -1.64
ATP13A3-206ENST00000461660 SAP30BPQ9UHR5 308 aaKnown RBP4.81□□□□□ -1.64
ATP13A3-206ENST00000461660 MYH14Q7Z406 1995 aaKnown RBP4.81□□□□□ -1.64
ATP13A3-206ENST00000461660 GSG1L2A8MUP6 293 aa4.81□□□□□ -1.64
ATP13A3-206ENST00000461660 C21orf2O43822 256 aa4.81□□□□□ -1.64
ATP13A3-206ENST00000461660 TSPY3P0CV98 308 aa4.81□□□□□ -1.64
ATP13A3-206ENST00000461660 TSPY8P0CW00 308 aa4.81□□□□□ -1.64
ATP13A3-206ENST00000461660 SYT1P21579 422 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms