RNA–Protein interactions for RNA: ENST00000461525.5

COL1A2-202, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL1A2, Length 776 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-202ENST00000461525 WRNIP1Q96S55 665 aa21.92■■□□□ 1.1
COL1A2-202ENST00000461525 HPS5Q9UPZ3 1129 aa21.92■■□□□ 1.1
COL1A2-202ENST00000461525 A0A1B0GUL7 405 aa21.91■■□□□ 1.1
COL1A2-202ENST00000461525 MVPQ14764 893 aaKnown RBP21.91■■□□□ 1.1
COL1A2-202ENST00000461525 DCAF15Q66K64 600 aa21.91■■□□□ 1.1
COL1A2-202ENST00000461525 CDC42EP5Q6NZY7 148 aa21.91■■□□□ 1.1
COL1A2-202ENST00000461525 OTUD5Q96G74 571 aa21.91■■□□□ 1.1
COL1A2-202ENST00000461525 CRHR2Q13324 411 aa21.9■■□□□ 1.1
COL1A2-202ENST00000461525 RASGRF1Q13972 1273 aa21.9■■□□□ 1.1
COL1A2-202ENST00000461525 FAM151AQ8WW52 585 aa21.9■■□□□ 1.1
COL1A2-202ENST00000461525 MS4A4AQ96JQ5 239 aa21.9■■□□□ 1.1
COL1A2-202ENST00000461525 PTPN18Q99952 460 aa21.9■■□□□ 1.1
COL1A2-202ENST00000461525 CCL15-CCL14A0A0B4J2E2 113 aa21.89■■□□□ 1.09
COL1A2-202ENST00000461525 SPDYE5A6NIY4 337 aa21.89■■□□□ 1.09
COL1A2-202ENST00000461525 GTF2A2P52657 109 aa21.89■■□□□ 1.09
COL1A2-202ENST00000461525 SOX10P56693 466 aa21.89■■□□□ 1.09
COL1A2-202ENST00000461525 CCL15Q16663 113 aa21.89■■□□□ 1.09
COL1A2-202ENST00000461525 FBXO46Q6PJ61 603 aaPredicted RBP21.89■■□□□ 1.09
COL1A2-202ENST00000461525 TMEM57Q8N5G2 664 aa21.89■■□□□ 1.09
COL1A2-202ENST00000461525 XAGE2Q96GT9 111 aa21.89■■□□□ 1.09
COL1A2-202ENST00000461525 SNCAIPQ9Y6H5 919 aa21.89■■□□□ 1.09
COL1A2-202ENST00000461525 PDS5AQ29RF7 1337 aaKnown RBP21.88■■□□□ 1.09
COL1A2-202ENST00000461525 PNMA6EA0A0J9YXQ4 647 aa21.88■■□□□ 1.09
COL1A2-202ENST00000461525 TCP10Q12799 353 aa21.88■■□□□ 1.09
COL1A2-202ENST00000461525 NFIAQ12857 509 aa21.88■■□□□ 1.09
COL1A2-202ENST00000461525 ERO1BQ86YB8 467 aa21.88■■□□□ 1.09
COL1A2-202ENST00000461525 DZIP1Q86YF9 867 aaKnown RBP21.88■■□□□ 1.09
COL1A2-202ENST00000461525 BRI3BPQ8WY22 251 aa21.88■■□□□ 1.09
COL1A2-202ENST00000461525 ZNF341Q9BYN7 854 aa21.88■■□□□ 1.09
COL1A2-202ENST00000461525 USP40Q9NVE5 1235 aa21.88■■□□□ 1.09
COL1A2-202ENST00000461525 ABCF2Q9UG63 623 aa21.88■■□□□ 1.09
COL1A2-202ENST00000461525 OTOFQ9HC10 1997 aa21.87■■□□□ 1.09
COL1A2-202ENST00000461525 G3BP1Q13283 466 aaKnown RBP eCLIP21.87■■□□□ 1.09
COL1A2-202ENST00000461525 MIGA2Q7L4E1 593 aa21.87■■□□□ 1.09
COL1A2-202ENST00000461525 ZKSCAN4Q969J2 545 aaPredicted RBP21.87■■□□□ 1.09
COL1A2-202ENST00000461525 NEUROD6Q96NK8 337 aa21.87■■□□□ 1.09
COL1A2-202ENST00000461525 GORABQ5T7V8 394 aa21.86■■□□□ 1.09
COL1A2-202ENST00000461525 SPTY2D1Q68D10 685 aaPredicted RBP21.86■■□□□ 1.09
COL1A2-202ENST00000461525 SLF2Q8IX21 1173 aa21.86■■□□□ 1.09
COL1A2-202ENST00000461525 FTSJ3Q8IY81 847 aaKnown RBP21.86■■□□□ 1.09
COL1A2-202ENST00000461525 ERO1AQ96HE7 468 aa21.86■■□□□ 1.09
COL1A2-202ENST00000461525 TRIM17Q9Y577 477 aa21.86■■□□□ 1.09
COL1A2-202ENST00000461525 GAKO14976 1311 aa21.85■■□□□ 1.09
COL1A2-202ENST00000461525 FAM198AQ9UFP1 575 aa21.85■■□□□ 1.09
COL1A2-202ENST00000461525 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.85■■□□□ 1.09
COL1A2-202ENST00000461525 CETPP11597 493 aa21.84■■□□□ 1.09
COL1A2-202ENST00000461525 INPP5BP32019 993 aa21.84■■□□□ 1.09
COL1A2-202ENST00000461525 TAF1CQ15572 869 aaPredicted RBP21.84■■□□□ 1.09
COL1A2-202ENST00000461525 OTOP1Q7RTM1 612 aa21.84■■□□□ 1.09
COL1A2-202ENST00000461525 MYH13Q9UKX3 1938 aa21.84■■□□□ 1.09
COL1A2-202ENST00000461525 PPIL2Q13356 520 aa21.83■■□□□ 1.09
COL1A2-202ENST00000461525 SNAPC2Q13487 334 aa21.83■■□□□ 1.09
COL1A2-202ENST00000461525 FAM43AQ8N2R8 423 aa21.83■■□□□ 1.09
COL1A2-202ENST00000461525 CD99L2Q8TCZ2 262 aa21.83■■□□□ 1.09
COL1A2-202ENST00000461525 ZFYVE28Q9HCC9 887 aa21.83■■□□□ 1.09
COL1A2-202ENST00000461525 LAMB1P07942 1786 aa21.83■■□□□ 1.09
COL1A2-202ENST00000461525 IRF6O14896 467 aa21.82■■□□□ 1.08
COL1A2-202ENST00000461525 WDHD1O75717 1129 aaPredicted RBP21.82■■□□□ 1.08
COL1A2-202ENST00000461525 RGS3P49796 1198 aa21.82■■□□□ 1.08
COL1A2-202ENST00000461525 SP3Q02447 781 aa21.82■■□□□ 1.08
COL1A2-202ENST00000461525 ERICH6Q7L0X2 663 aa21.82■■□□□ 1.08
COL1A2-202ENST00000461525 ITPRIPQ8IWB1 547 aa21.82■■□□□ 1.08
COL1A2-202ENST00000461525 FAM163AQ96GL9 167 aaPredicted RBP21.82■■□□□ 1.08
COL1A2-202ENST00000461525 IDI2Q9BXS1 227 aa21.82■■□□□ 1.08
COL1A2-202ENST00000461525 HMG20BQ9P0W2 317 aa21.82■■□□□ 1.08
COL1A2-202ENST00000461525 ZBED9Q6R2W3 1325 aa21.81■■□□□ 1.08
COL1A2-202ENST00000461525 ENTPD3O75355 529 aa21.81■■□□□ 1.08
COL1A2-202ENST00000461525 BTDP43251 543 aa21.81■■□□□ 1.08
COL1A2-202ENST00000461525 PPATQ06203 517 aa21.81■■□□□ 1.08
COL1A2-202ENST00000461525 OS9Q13438 667 aaPredicted RBP21.81■■□□□ 1.08
COL1A2-202ENST00000461525 POLA2Q14181 598 aa21.81■■□□□ 1.08
COL1A2-202ENST00000461525 ZFPM1Q8IX07 1006 aa21.81■■□□□ 1.08
COL1A2-202ENST00000461525 SPATA5Q8NB90 893 aa21.81■■□□□ 1.08
COL1A2-202ENST00000461525 ZNF112Q9UJU3 913 aa21.81■■□□□ 1.08
COL1A2-202ENST00000461525 MROH7-TTC4A0A0A0MT08 1334 aa21.8■■□□□ 1.08
COL1A2-202ENST00000461525 ARID4AP29374 1257 aaPredicted RBP21.8■■□□□ 1.08
COL1A2-202ENST00000461525 MECOMQ03112 1051 aa21.8■■□□□ 1.08
COL1A2-202ENST00000461525 PI16Q6UXB8 463 aa21.8■■□□□ 1.08
COL1A2-202ENST00000461525 C1orf115Q9H7X2 142 aa21.8■■□□□ 1.08
COL1A2-202ENST00000461525 EFCC1Q9HA90 598 aa21.8■■□□□ 1.08
COL1A2-202ENST00000461525 ZCCHC17Q9NP64 241 aaKnown RBP21.8■■□□□ 1.08
COL1A2-202ENST00000461525 RFX7Q2KHR2 1363 aa21.79■■□□□ 1.08
COL1A2-202ENST00000461525 UQCRFS1P1P0C7P4 283 aa21.79■■□□□ 1.08
COL1A2-202ENST00000461525 ATP8B2P98198 1209 aa21.79■■□□□ 1.08
COL1A2-202ENST00000461525 NOL9Q5SY16 702 aaKnown RBP21.79■■□□□ 1.08
COL1A2-202ENST00000461525 ZSCAN29Q8IWY8 852 aaPredicted RBP21.79■■□□□ 1.08
COL1A2-202ENST00000461525 SSH3Q8TE77 659 aa21.79■■□□□ 1.08
COL1A2-202ENST00000461525 BTBD19C9JJ37 291 aa21.78■■□□□ 1.08
COL1A2-202ENST00000461525 RLBP1P12271 317 aa21.78■■□□□ 1.08
COL1A2-202ENST00000461525 GSTO1P78417 241 aa21.78■■□□□ 1.08
COL1A2-202ENST00000461525 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.78■■□□□ 1.08
COL1A2-202ENST00000461525 GPR108Q9NPR9 543 aa21.78■■□□□ 1.08
COL1A2-202ENST00000461525 ATRNL1Q5VV63 1379 aa21.77■■□□□ 1.08
COL1A2-202ENST00000461525 GPR75-ASB3A0A0A6YYF3 556 aa21.77■■□□□ 1.08
COL1A2-202ENST00000461525 SURF6O75683 361 aaKnown RBP21.77■■□□□ 1.08
COL1A2-202ENST00000461525 PICALMQ13492 652 aa21.77■■□□□ 1.08
COL1A2-202ENST00000461525 ARHGEF6Q15052 776 aa21.77■■□□□ 1.08
COL1A2-202ENST00000461525 TNNI3KQ59H18 835 aa21.77■■□□□ 1.08
COL1A2-202ENST00000461525 TBC1D9Q6ZT07 1266 aa21.77■■□□□ 1.08
COL1A2-202ENST00000461525 RAI14Q9P0K7 980 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms