RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 MAST2Q6P0Q8 1798 aa12.35□□□□□ -0.43
HDLBP-228ENST00000459788 ZBTB7BO15156 539 aaPredicted RBP12.35□□□□□ -0.43
HDLBP-228ENST00000459788 NPM3O75607 178 aaKnown RBP12.35□□□□□ -0.43
HDLBP-228ENST00000459788 UQCRFS1P1P0C7P4 283 aa12.35□□□□□ -0.43
HDLBP-228ENST00000459788 ARID4AP29374 1257 aaPredicted RBP12.35□□□□□ -0.43
HDLBP-228ENST00000459788 PRDX5P30044 214 aa12.35□□□□□ -0.43
HDLBP-228ENST00000459788 RGS19P49795 217 aa12.35□□□□□ -0.43
HDLBP-228ENST00000459788 TIMM10P62072 90 aa12.35□□□□□ -0.43
HDLBP-228ENST00000459788 IFNL1Q8IU54 200 aa12.35□□□□□ -0.43
HDLBP-228ENST00000459788 CLMNQ96JQ2 1002 aa12.35□□□□□ -0.43
HDLBP-228ENST00000459788 IDI2Q9BXS1 227 aa12.35□□□□□ -0.43
HDLBP-228ENST00000459788 TMEM39BQ9GZU3 492 aa12.35□□□□□ -0.43
HDLBP-228ENST00000459788 NOP58Q9Y2X3 529 aaKnown RBP12.35□□□□□ -0.43
HDLBP-228ENST00000459788 PNMA6EA0A0J9YXQ4 647 aa12.34□□□□□ -0.43
HDLBP-228ENST00000459788 GPR25O00155 361 aa12.34□□□□□ -0.43
HDLBP-228ENST00000459788 ENTPD3O75355 529 aa12.34□□□□□ -0.43
HDLBP-228ENST00000459788 CAPN15O75808 1086 aa12.34□□□□□ -0.43
HDLBP-228ENST00000459788 GTF2A2P52657 109 aa12.34□□□□□ -0.43
HDLBP-228ENST00000459788 RASGRF1Q13972 1273 aa12.34□□□□□ -0.43
HDLBP-228ENST00000459788 TMED8Q6PL24 325 aaPredicted RBP12.34□□□□□ -0.43
HDLBP-228ENST00000459788 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.34□□□□□ -0.43
HDLBP-228ENST00000459788 ZNF512BQ96KM6 892 aaPredicted RBP12.34□□□□□ -0.43
HDLBP-228ENST00000459788 ZNF341Q9BYN7 854 aa12.34□□□□□ -0.43
HDLBP-228ENST00000459788 CHMP4BQ9H444 224 aaKnown RBP12.34□□□□□ -0.43
HDLBP-228ENST00000459788 FOCADQ5VW36 1801 aa12.33□□□□□ -0.44
HDLBP-228ENST00000459788 SPDYE5A6NIY4 337 aa12.33□□□□□ -0.44
HDLBP-228ENST00000459788 FKTNO75072 461 aa12.33□□□□□ -0.44
HDLBP-228ENST00000459788 LDHCP07864 332 aa12.33□□□□□ -0.44
HDLBP-228ENST00000459788 ADORA1P30542 326 aa12.33□□□□□ -0.44
HDLBP-228ENST00000459788 GSTO1P78417 241 aa12.33□□□□□ -0.44
HDLBP-228ENST00000459788 GORABQ5T7V8 394 aa12.33□□□□□ -0.44
HDLBP-228ENST00000459788 CDC42EP5Q6NZY7 148 aa12.33□□□□□ -0.44
HDLBP-228ENST00000459788 ERO1BQ86YB8 467 aa12.33□□□□□ -0.44
HDLBP-228ENST00000459788 OPTNQ96CV9 577 aa12.33□□□□□ -0.44
HDLBP-228ENST00000459788 ZNF112Q9UJU3 913 aa12.33□□□□□ -0.44
HDLBP-228ENST00000459788 TNNQ9UQP3 1299 aa12.33□□□□□ -0.44
HDLBP-228ENST00000459788 COL2A1P02458 1487 aaPredicted RBP12.33□□□□□ -0.44
HDLBP-228ENST00000459788 RFX7Q2KHR2 1363 aa12.32□□□□□ -0.44
HDLBP-228ENST00000459788 CDK5RAP2Q96SN8 1893 aa12.32□□□□□ -0.44
HDLBP-228ENST00000459788 WDHD1O75717 1129 aaPredicted RBP12.32□□□□□ -0.44
HDLBP-228ENST00000459788 MAP3K10Q02779 954 aa12.32□□□□□ -0.44
HDLBP-228ENST00000459788 VGLL4Q14135 290 aa12.32□□□□□ -0.44
HDLBP-228ENST00000459788 DIXDC1Q155Q3 683 aa12.32□□□□□ -0.44
HDLBP-228ENST00000459788 ERICH6Q7L0X2 663 aa12.32□□□□□ -0.44
HDLBP-228ENST00000459788 DZIP1Q86YF9 867 aaKnown RBP12.32□□□□□ -0.44
HDLBP-228ENST00000459788 ITPRIPQ8IWB1 547 aa12.32□□□□□ -0.44
HDLBP-228ENST00000459788 SPATA5Q8NB90 893 aa12.32□□□□□ -0.44
HDLBP-228ENST00000459788 ZNF296Q8WUU4 475 aaPredicted RBP12.32□□□□□ -0.44
HDLBP-228ENST00000459788 MS4A4AQ96JQ5 239 aa12.32□□□□□ -0.44
HDLBP-228ENST00000459788 NEUROD6Q96NK8 337 aa12.32□□□□□ -0.44
HDLBP-228ENST00000459788 USP40Q9NVE5 1235 aa12.32□□□□□ -0.44
HDLBP-228ENST00000459788 FZD1Q9UP38 647 aa12.32□□□□□ -0.44
HDLBP-228ENST00000459788 MYO5AQ9Y4I1 1855 aaKnown RBP12.31□□□□□ -0.44
HDLBP-228ENST00000459788 PTPRFP10586 1907 aa12.31□□□□□ -0.44
HDLBP-228ENST00000459788 PDE4DIPQ5VU43 2346 aa12.31□□□□□ -0.44
HDLBP-228ENST00000459788 GPR75-ASB3A0A0A6YYF3 556 aa12.31□□□□□ -0.44
HDLBP-228ENST00000459788 IGF2BP3O00425 579 aaKnown RBP eCLIP12.31□□□□□ -0.44
HDLBP-228ENST00000459788 TBC1D8O95759 1140 aa12.31□□□□□ -0.44
HDLBP-228ENST00000459788 GJA5P36382 358 aa12.31□□□□□ -0.44
HDLBP-228ENST00000459788 CACNB3P54284 484 aa12.31□□□□□ -0.44
HDLBP-228ENST00000459788 PPATQ06203 517 aa12.31□□□□□ -0.44
HDLBP-228ENST00000459788 PPIL2Q13356 520 aa12.31□□□□□ -0.44
HDLBP-228ENST00000459788 HSP90AB4PQ58FF6 505 aa12.31□□□□□ -0.44
HDLBP-228ENST00000459788 TNNI3KQ59H18 835 aa12.31□□□□□ -0.44
HDLBP-228ENST00000459788 CCDC158Q5M9N0 1113 aa12.31□□□□□ -0.44
HDLBP-228ENST00000459788 NOL9Q5SY16 702 aaKnown RBP12.31□□□□□ -0.44
HDLBP-228ENST00000459788 ERC1Q8IUD2 1116 aa12.31□□□□□ -0.44
HDLBP-228ENST00000459788 WRNIP1Q96S55 665 aa12.31□□□□□ -0.44
HDLBP-228ENST00000459788 ELP3Q9H9T3 547 aa12.31□□□□□ -0.44
HDLBP-228ENST00000459788 HMG20BQ9P0W2 317 aa12.31□□□□□ -0.44
HDLBP-228ENST00000459788 FPGT-TNNI3KV9GXZ4 949 aa12.31□□□□□ -0.44
HDLBP-228ENST00000459788 DOCK1Q14185 1865 aa12.31□□□□□ -0.44
HDLBP-228ENST00000459788 MROH7-TTC4A0A0A0MT08 1334 aa12.31□□□□□ -0.44
HDLBP-228ENST00000459788 SURF6O75683 361 aaKnown RBP12.3□□□□□ -0.44
HDLBP-228ENST00000459788 CETPP11597 493 aa12.3□□□□□ -0.44
HDLBP-228ENST00000459788 RLBP1P12271 317 aa12.3□□□□□ -0.44
HDLBP-228ENST00000459788 MKRN3Q13064 507 aaKnown RBP12.3□□□□□ -0.44
HDLBP-228ENST00000459788 OS9Q13438 667 aaPredicted RBP12.3□□□□□ -0.44
HDLBP-228ENST00000459788 ARHGEF6Q15052 776 aa12.3□□□□□ -0.44
HDLBP-228ENST00000459788 CDAN1Q8IWY9 1227 aa12.3□□□□□ -0.44
HDLBP-228ENST00000459788 ERO1AQ96HE7 468 aa12.3□□□□□ -0.44
HDLBP-228ENST00000459788 FAM198AQ9UFP1 575 aa12.3□□□□□ -0.44
HDLBP-228ENST00000459788 ABCF2Q9UG63 623 aa12.3□□□□□ -0.44
HDLBP-228ENST00000459788 DDX19BQ9UMR2 479 aa12.3□□□□□ -0.44
HDLBP-228ENST00000459788 SNCAIPQ9Y6H5 919 aa12.3□□□□□ -0.44
HDLBP-228ENST00000459788 RBBP6Q7Z6E9 1792 aaKnown RBP12.3□□□□□ -0.44
HDLBP-228ENST00000459788 PHIPQ8WWQ0 1821 aa12.3□□□□□ -0.44
HDLBP-228ENST00000459788 ATRNL1Q5VV63 1379 aa12.3□□□□□ -0.44
HDLBP-228ENST00000459788 CCDC85CA6NKD9 419 aa12.29□□□□□ -0.44
HDLBP-228ENST00000459788 TBC1D12O60347 775 aa12.29□□□□□ -0.44
HDLBP-228ENST00000459788 MECOMQ03112 1051 aa12.29□□□□□ -0.44
HDLBP-228ENST00000459788 SNAPC2Q13487 334 aa12.29□□□□□ -0.44
HDLBP-228ENST00000459788 FBXO46Q6PJ61 603 aaPredicted RBP12.29□□□□□ -0.44
HDLBP-228ENST00000459788 CERS3Q8IU89 383 aa12.29□□□□□ -0.44
HDLBP-228ENST00000459788 RPAP2Q8IXW5 612 aaPredicted RBP12.29□□□□□ -0.44
HDLBP-228ENST00000459788 NSUN4Q96CB9 384 aaKnown RBP12.29□□□□□ -0.44
HDLBP-228ENST00000459788 ATAD5Q96QE3 1844 aa12.29□□□□□ -0.44
HDLBP-228ENST00000459788 CCL15-CCL14A0A0B4J2E2 113 aa12.28□□□□□ -0.44
HDLBP-228ENST00000459788 PLCG2P16885 1265 aa12.28□□□□□ -0.44
HDLBP-228ENST00000459788 MCAMP43121 646 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms