RNA–Protein interactions for RNA: ENST00000458059.7

CNEP1R1-203, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,965 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-203ENST00000458059 TRMT44Q8IYL2 757 aaKnown RBP22.6■■□□□ 1.21
CNEP1R1-203ENST00000458059 HSD3B7Q9H2F3 369 aa22.6■■□□□ 1.21
CNEP1R1-203ENST00000458059 ASAP1Q9ULH1 1129 aa22.6■■□□□ 1.21
CNEP1R1-203ENST00000458059 ZNF532Q9HCE3 1301 aa22.6■■□□□ 1.21
CNEP1R1-203ENST00000458059 PHKA1P46020 1223 aa22.6■■□□□ 1.21
CNEP1R1-203ENST00000458059 ADAMTS7Q9UKP4 1686 aa22.6■■□□□ 1.21
CNEP1R1-203ENST00000458059 LRRFIP1Q32MZ4 808 aaKnown RBP22.59■■□□□ 1.21
CNEP1R1-203ENST00000458059 CCDC150Q8NCX0 1101 aa22.59■■□□□ 1.21
CNEP1R1-203ENST00000458059 TRPM3Q9HCF6 1732 aaPredicted RBP22.59■■□□□ 1.21
CNEP1R1-203ENST00000458059 URI1O94763 535 aaPredicted RBP22.59■■□□□ 1.21
CNEP1R1-203ENST00000458059 EVCP57679 992 aa22.59■■□□□ 1.21
CNEP1R1-203ENST00000458059 SYCP1Q15431 976 aa22.59■■□□□ 1.21
CNEP1R1-203ENST00000458059 APOA5Q6Q788 366 aa22.59■■□□□ 1.21
CNEP1R1-203ENST00000458059 NWD2Q9ULI1 1742 aa22.59■■□□□ 1.21
CNEP1R1-203ENST00000458059 GOLGA8AA7E2F4 631 aa22.59■■□□□ 1.21
CNEP1R1-203ENST00000458059 ZFYP08048 801 aaPredicted RBP22.59■■□□□ 1.21
CNEP1R1-203ENST00000458059 GUCY1A2P33402 732 aa22.59■■□□□ 1.21
CNEP1R1-203ENST00000458059 PDE4BQ07343 736 aa22.59■■□□□ 1.21
CNEP1R1-203ENST00000458059 FOXP4Q8IVH2 680 aaPredicted RBP22.59■■□□□ 1.21
CNEP1R1-203ENST00000458059 CNNM3Q8NE01 707 aa22.59■■□□□ 1.21
CNEP1R1-203ENST00000458059 ZNF446Q9NWS9 450 aa22.59■■□□□ 1.21
CNEP1R1-203ENST00000458059 RANBP6O60518 1105 aaKnown RBP22.58■■□□□ 1.21
CNEP1R1-203ENST00000458059 ARHGAP29Q52LW3 1261 aa22.58■■□□□ 1.21
CNEP1R1-203ENST00000458059 TMEM67Q5HYA8 995 aa22.58■■□□□ 1.21
CNEP1R1-203ENST00000458059 PCDHA5Q9Y5H7 936 aa22.58■■□□□ 1.21
CNEP1R1-203ENST00000458059 TMEM94Q12767 1356 aa22.58■■□□□ 1.21
CNEP1R1-203ENST00000458059 CAMTA1Q9Y6Y1 1673 aa22.58■■□□□ 1.2
CNEP1R1-203ENST00000458059 IARSP41252 1262 aaKnown RBP22.58■■□□□ 1.2
CNEP1R1-203ENST00000458059 ZBTB43O43298 467 aa22.57■■□□□ 1.2
CNEP1R1-203ENST00000458059 METTL16Q86W50 562 aaKnown RBP22.57■■□□□ 1.2
CNEP1R1-203ENST00000458059 IMPACTQ9P2X3 320 aa22.57■■□□□ 1.2
CNEP1R1-203ENST00000458059 NRDCO43847 1150 aa22.57■■□□□ 1.2
CNEP1R1-203ENST00000458059 TRIM29Q14134 588 aa22.57■■□□□ 1.2
CNEP1R1-203ENST00000458059 KRT222Q8N1A0 295 aa22.57■■□□□ 1.2
CNEP1R1-203ENST00000458059 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.57■■□□□ 1.2
CNEP1R1-203ENST00000458059 BTBD18B2RXH4 712 aa22.56■■□□□ 1.2
CNEP1R1-203ENST00000458059 KIF6Q6ZMV9 814 aa22.56■■□□□ 1.2
CNEP1R1-203ENST00000458059 ISCA1Q9BUE6 129 aa22.56■■□□□ 1.2
CNEP1R1-203ENST00000458059 PCDH11XQ9BZA7 1347 aa22.56■■□□□ 1.2
CNEP1R1-203ENST00000458059 PCDH11YQ9BZA8 1340 aa22.56■■□□□ 1.2
CNEP1R1-203ENST00000458059 AIDAQ96BJ3 306 aa22.56■■□□□ 1.2
CNEP1R1-203ENST00000458059 ABCC6O95255 1503 aa22.56■■□□□ 1.2
CNEP1R1-203ENST00000458059 ZMYM6O95789 1325 aa22.56■■□□□ 1.2
CNEP1R1-203ENST00000458059 SH2B2O14492 632 aaPredicted RBP22.56■■□□□ 1.2
CNEP1R1-203ENST00000458059 FANCGO15287 622 aa22.56■■□□□ 1.2
CNEP1R1-203ENST00000458059 TOP1P11387 765 aaKnown RBP22.56■■□□□ 1.2
CNEP1R1-203ENST00000458059 ADD2P35612 726 aa22.56■■□□□ 1.2
CNEP1R1-203ENST00000458059 MYL5Q02045 173 aa22.56■■□□□ 1.2
CNEP1R1-203ENST00000458059 MORC2Q9Y6X9 1032 aaPredicted RBP22.56■■□□□ 1.2
CNEP1R1-203ENST00000458059 hCG_1642624A0A1W2PR95 340 aa22.55■■□□□ 1.2
CNEP1R1-203ENST00000458059 IFIT3O14879 490 aaKnown RBP22.55■■□□□ 1.2
CNEP1R1-203ENST00000458059 ADKP55263 362 aaKnown RBP22.55■■□□□ 1.2
CNEP1R1-203ENST00000458059 OLFM4Q6UX06 510 aa22.55■■□□□ 1.2
CNEP1R1-203ENST00000458059 IQSEC3Q9UPP2 1182 aaPredicted RBP22.55■■□□□ 1.2
CNEP1R1-203ENST00000458059 PRKAB2O43741 272 aa22.55■■□□□ 1.2
CNEP1R1-203ENST00000458059 ARMT1Q9H993 441 aa22.55■■□□□ 1.2
CNEP1R1-203ENST00000458059 KCNH3Q9ULD8 1083 aa22.55■■□□□ 1.2
CNEP1R1-203ENST00000458059 NUP133Q8WUM0 1156 aa22.54■■□□□ 1.2
CNEP1R1-203ENST00000458059 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.54■■□□□ 1.2
CNEP1R1-203ENST00000458059 PRR29P0C7W0 189 aa22.54■■□□□ 1.2
CNEP1R1-203ENST00000458059 PDE6AP16499 860 aa22.54■■□□□ 1.2
CNEP1R1-203ENST00000458059 CDK11BP21127 795 aaKnown RBP22.54■■□□□ 1.2
CNEP1R1-203ENST00000458059 BMP6P22004 513 aa22.54■■□□□ 1.2
CNEP1R1-203ENST00000458059 PTPAQ15257 358 aa22.54■■□□□ 1.2
CNEP1R1-203ENST00000458059 CPLX2Q6PUV4 134 aaKnown RBP22.54■■□□□ 1.2
CNEP1R1-203ENST00000458059 CHMP4CQ96CF2 233 aa22.54■■□□□ 1.2
CNEP1R1-203ENST00000458059 DESI2Q9BSY9 194 aa22.54■■□□□ 1.2
CNEP1R1-203ENST00000458059 TMOD3Q9NYL9 352 aa22.54■■□□□ 1.2
CNEP1R1-203ENST00000458059 TBC1D2BQ9UPU7 963 aa22.54■■□□□ 1.2
CNEP1R1-203ENST00000458059 UBN2Q6ZU65 1347 aa22.54■■□□□ 1.2
CNEP1R1-203ENST00000458059 CARD6Q9BX69 1037 aa22.53■■□□□ 1.2
CNEP1R1-203ENST00000458059 CLCN6P51797 869 aa22.53■■□□□ 1.2
CNEP1R1-203ENST00000458059 NR5A1Q13285 461 aa22.53■■□□□ 1.2
CNEP1R1-203ENST00000458059 MAGEB6Q8N7X4 407 aa22.53■■□□□ 1.2
CNEP1R1-203ENST00000458059 ZSWIM5Q9P217 1185 aa22.53■■□□□ 1.2
CNEP1R1-203ENST00000458059 COBLO75128 1261 aa22.53■■□□□ 1.2
CNEP1R1-203ENST00000458059 SEC31AO94979 1220 aaKnown RBP22.53■■□□□ 1.2
CNEP1R1-203ENST00000458059 MBD4O95243 580 aa22.53■■□□□ 1.2
CNEP1R1-203ENST00000458059 SLFN14P0C7P3 912 aa22.53■■□□□ 1.2
CNEP1R1-203ENST00000458059 CCDC102BQ68D86 513 aa22.53■■□□□ 1.2
CNEP1R1-203ENST00000458059 MNS1Q8NEH6 495 aa22.53■■□□□ 1.2
CNEP1R1-203ENST00000458059 TRMT112Q9UI30 125 aaKnown RBP22.53■■□□□ 1.2
CNEP1R1-203ENST00000458059 SLC12A7Q9Y666 1083 aa22.53■■□□□ 1.2
CNEP1R1-203ENST00000458059 CASP1P29466 404 aa22.52■■□□□ 1.2
CNEP1R1-203ENST00000458059 USP49Q70CQ1 688 aa22.52■■□□□ 1.2
CNEP1R1-203ENST00000458059 MIGA1Q8NAN2 632 aa22.52■■□□□ 1.2
CNEP1R1-203ENST00000458059 TTLL11Q8NHH1 800 aa22.52■■□□□ 1.2
CNEP1R1-203ENST00000458059 BPIFA3Q9BQP9 254 aa22.52■■□□□ 1.2
CNEP1R1-203ENST00000458059 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.52■■□□□ 1.2
CNEP1R1-203ENST00000458059 ZSWIM4Q9H7M6 989 aa22.52■■□□□ 1.2
CNEP1R1-203ENST00000458059 RIPOR2Q9Y4F9 1068 aa22.52■■□□□ 1.2
CNEP1R1-203ENST00000458059 TACC3Q9Y6A5 838 aa22.52■■□□□ 1.2
CNEP1R1-203ENST00000458059 SMIM22K7EJ46 135 aa22.52■■□□□ 1.2
CNEP1R1-203ENST00000458059 POLR2DO15514 142 aaKnown RBP22.52■■□□□ 1.2
CNEP1R1-203ENST00000458059 EVA1CP58658 441 aa22.52■■□□□ 1.2
CNEP1R1-203ENST00000458059 ETF1P62495 437 aaKnown RBP22.52■■□□□ 1.2
CNEP1R1-203ENST00000458059 KLHL10Q6JEL2 608 aa22.52■■□□□ 1.2
CNEP1R1-203ENST00000458059 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.52■■□□□ 1.2
CNEP1R1-203ENST00000458059 MAP3K14Q99558 947 aa22.52■■□□□ 1.2
CNEP1R1-203ENST00000458059 NAPBQ9H115 298 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms