RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 SPDYE2BA6NHP3 402 aa13.51□□□□□ -0.25
TRAF4-206ENST00000454852 F8W031 263 aaPredicted RBP13.51□□□□□ -0.25
TRAF4-206ENST00000454852 REC8O95072 547 aa13.51□□□□□ -0.25
TRAF4-206ENST00000454852 MBD4O95243 580 aa13.51□□□□□ -0.25
TRAF4-206ENST00000454852 SPDYE6P0CI01 402 aa13.51□□□□□ -0.25
TRAF4-206ENST00000454852 RHBDL3P58872 404 aa13.51□□□□□ -0.25
TRAF4-206ENST00000454852 GIMAP6Q6P9H5 292 aa13.51□□□□□ -0.25
TRAF4-206ENST00000454852 ZNF589Q86UQ0 364 aaPredicted RBP13.51□□□□□ -0.25
TRAF4-206ENST00000454852 DSCC1Q9BVC3 393 aa13.51□□□□□ -0.25
TRAF4-206ENST00000454852 CNOT7Q9UIV1 285 aaKnown RBP13.51□□□□□ -0.25
TRAF4-206ENST00000454852 GJA3Q9Y6H8 435 aa13.51□□□□□ -0.25
TRAF4-206ENST00000454852 ECM29Q5VYK3 1845 aa13.5□□□□□ -0.25
TRAF4-206ENST00000454852 FOXP2O15409 715 aa13.5□□□□□ -0.25
TRAF4-206ENST00000454852 DDNO94850 711 aaPredicted RBP13.5□□□□□ -0.25
TRAF4-206ENST00000454852 BTDP43251 543 aa13.5□□□□□ -0.25
TRAF4-206ENST00000454852 ALX1Q15699 326 aa13.5□□□□□ -0.25
TRAF4-206ENST00000454852 CFAP100Q494V2 611 aa13.5□□□□□ -0.25
TRAF4-206ENST00000454852 MICALL2Q8IY33 904 aa13.5□□□□□ -0.25
TRAF4-206ENST00000454852 LCORLQ8N3X6 602 aa13.5□□□□□ -0.25
TRAF4-206ENST00000454852 MIGA1Q8NAN2 632 aa13.5□□□□□ -0.25
TRAF4-206ENST00000454852 NOL10Q9BSC4 688 aaKnown RBP13.5□□□□□ -0.25
TRAF4-206ENST00000454852 LSG1Q9H089 658 aaKnown RBP13.5□□□□□ -0.25
TRAF4-206ENST00000454852 MYOZ2Q9NPC6 264 aa13.5□□□□□ -0.25
TRAF4-206ENST00000454852 AATFQ9NY61 560 aaKnown RBP eCLIP13.5□□□□□ -0.25
TRAF4-206ENST00000454852 CDK5RAP2Q96SN8 1893 aa13.49□□□□□ -0.25
TRAF4-206ENST00000454852 PATL2C9JE40 543 aaKnown RBP13.49□□□□□ -0.25
TRAF4-206ENST00000454852 H7C1D1 291 aa13.49□□□□□ -0.25
TRAF4-206ENST00000454852 DLGAP5Q15398 846 aa13.49□□□□□ -0.25
TRAF4-206ENST00000454852 FKBP1CQ5VVH2 108 aa13.49□□□□□ -0.25
TRAF4-206ENST00000454852 MAP4K1Q92918 833 aa13.49□□□□□ -0.25
TRAF4-206ENST00000454852 PRMT6Q96LA8 375 aaPredicted RBP13.49□□□□□ -0.25
TRAF4-206ENST00000454852 IDI2Q9BXS1 227 aa13.49□□□□□ -0.25
TRAF4-206ENST00000454852 CRNKL1Q9BZJ0 848 aaKnown RBP13.49□□□□□ -0.25
TRAF4-206ENST00000454852 ARMT1Q9H993 441 aa13.49□□□□□ -0.25
TRAF4-206ENST00000454852 ATP8A2Q9NTI2 1148 aa13.49□□□□□ -0.25
TRAF4-206ENST00000454852 MKRN1Q9UHC7 482 aaKnown RBP13.49□□□□□ -0.25
TRAF4-206ENST00000454852 DDX60LQ5H9U9 1706 aaKnown RBP13.49□□□□□ -0.25
TRAF4-206ENST00000454852 COL2A1P02458 1487 aaPredicted RBP13.48□□□□□ -0.25
TRAF4-206ENST00000454852 GSG1L2A8MUP6 293 aa13.48□□□□□ -0.25
TRAF4-206ENST00000454852 WNT10BO00744 389 aa13.48□□□□□ -0.25
TRAF4-206ENST00000454852 HSPD1P10809 573 aaKnown RBP13.48□□□□□ -0.25
TRAF4-206ENST00000454852 DYNLL1P63167 89 aaKnown RBP13.48□□□□□ -0.25
TRAF4-206ENST00000454852 SPDYE2Q495Y8 402 aa13.48□□□□□ -0.25
TRAF4-206ENST00000454852 CDC42EP5Q6NZY7 148 aa13.48□□□□□ -0.25
TRAF4-206ENST00000454852 CCDC129Q6ZRS4 1044 aa13.48□□□□□ -0.25
TRAF4-206ENST00000454852 SHTN1A0MZ66 631 aa13.47□□□□□ -0.25
TRAF4-206ENST00000454852 IQCA1LA6NCM1 817 aa13.47□□□□□ -0.25
TRAF4-206ENST00000454852 WDHD1O75717 1129 aaPredicted RBP13.47□□□□□ -0.25
TRAF4-206ENST00000454852 SEC24BO95487 1268 aa13.47□□□□□ -0.25
TRAF4-206ENST00000454852 LMOD1P29536 600 aaPredicted RBP13.47□□□□□ -0.25
TRAF4-206ENST00000454852 KIAA1211Q6ZU35 1233 aa13.47□□□□□ -0.25
TRAF4-206ENST00000454852 SH3RF3Q8TEJ3 882 aaPredicted RBP13.47□□□□□ -0.25
TRAF4-206ENST00000454852 USP26Q9BXU7 913 aa13.47□□□□□ -0.25
TRAF4-206ENST00000454852 ADARB2Q9NS39 739 aaKnown RBP13.47□□□□□ -0.25
TRAF4-206ENST00000454852 EPS15P42566 896 aa13.46□□□□□ -0.25
TRAF4-206ENST00000454852 RBM5P52756 815 aaKnown RBP eCLIP13.46□□□□□ -0.258e-14■■■■□ 26.3
TRAF4-206ENST00000454852 PTH1RQ03431 593 aa13.46□□□□□ -0.25
TRAF4-206ENST00000454852 KIF4BQ2VIQ3 1234 aa13.46□□□□□ -0.25
TRAF4-206ENST00000454852 VPS53Q5VIR6 699 aa13.46□□□□□ -0.25
TRAF4-206ENST00000454852 USP50Q70EL3 339 aaPredicted RBP13.46□□□□□ -0.25
TRAF4-206ENST00000454852 IFNL3Q8IZI9 196 aa13.46□□□□□ -0.25
TRAF4-206ENST00000454852 KCNB2Q92953 911 aa13.46□□□□□ -0.25
TRAF4-206ENST00000454852 IL17RAQ96F46 866 aa13.46□□□□□ -0.25
TRAF4-206ENST00000454852 NACAP1Q9BZK3 213 aa13.46□□□□□ -0.25
TRAF4-206ENST00000454852 DCP1AQ9NPI6 582 aaPredicted RBP13.46□□□□□ -0.25
TRAF4-206ENST00000454852 ANO2Q9NQ90 1003 aa13.46□□□□□ -0.25
TRAF4-206ENST00000454852 USP40Q9NVE5 1235 aa13.46□□□□□ -0.25
TRAF4-206ENST00000454852 HACL1Q9UJ83 578 aa13.46□□□□□ -0.25
TRAF4-206ENST00000454852 TAOK2Q9UL54 1235 aa13.46□□□□□ -0.25
TRAF4-206ENST00000454852 PCDHAC2Q9Y5I4 1007 aa13.46□□□□□ -0.25
TRAF4-206ENST00000454852 SLC4A4Q9Y6R1 1079 aa13.46□□□□□ -0.25
TRAF4-206ENST00000454852 U3KPZ7 1027 aaPredicted RBP13.46□□□□□ -0.25
TRAF4-206ENST00000454852 PITPNM2Q9BZ72 1349 aa13.45□□□□□ -0.26
TRAF4-206ENST00000454852 NAV1Q8NEY1 1877 aa13.45□□□□□ -0.26
TRAF4-206ENST00000454852 POTECB2RU33 542 aa13.45□□□□□ -0.26
TRAF4-206ENST00000454852 PRKAB2O43741 272 aa13.45□□□□□ -0.26
TRAF4-206ENST00000454852 MYO1BO43795 1136 aa13.45□□□□□ -0.26
TRAF4-206ENST00000454852 ENTPD3O75355 529 aa13.45□□□□□ -0.26
TRAF4-206ENST00000454852 EGFRP00533 1210 aa13.45□□□□□ -0.26
TRAF4-206ENST00000454852 NECTIN1Q15223 517 aa13.45□□□□□ -0.26
TRAF4-206ENST00000454852 SBK1Q52WX2 424 aa13.45□□□□□ -0.26
TRAF4-206ENST00000454852 SAMD7Q7Z3H4 446 aa13.45□□□□□ -0.26
TRAF4-206ENST00000454852 FAM83AQ86UY5 434 aa13.45□□□□□ -0.26
TRAF4-206ENST00000454852 TEX11Q8IYF3 940 aa13.45□□□□□ -0.26
TRAF4-206ENST00000454852 ZC3H15Q8WU90 426 aaKnown RBP13.45□□□□□ -0.26
TRAF4-206ENST00000454852 EPB41L4AQ9HCS5 686 aaPredicted RBP13.45□□□□□ -0.26
TRAF4-206ENST00000454852 ZNF70Q9UC06 446 aaPredicted RBP13.45□□□□□ -0.26
TRAF4-206ENST00000454852 PGAP2Q9UHJ9 254 aa13.45□□□□□ -0.26
TRAF4-206ENST00000454852 CTNNA3Q9UI47 895 aa13.45□□□□□ -0.26
TRAF4-206ENST00000454852 LAMA4Q16363 1823 aa13.45□□□□□ -0.26
TRAF4-206ENST00000454852 ATRNL1Q5VV63 1379 aa13.45□□□□□ -0.26
TRAF4-206ENST00000454852 FLT1P17948 1338 aa13.44□□□□□ -0.26
TRAF4-206ENST00000454852 FGAP02671 866 aa13.44□□□□□ -0.26
TRAF4-206ENST00000454852 HSPA4P34932 840 aa13.44□□□□□ -0.26
TRAF4-206ENST00000454852 HIRAP54198 1017 aaPredicted RBP13.44□□□□□ -0.26
TRAF4-206ENST00000454852 NBPF9Q3BBW0 867 aa13.44□□□□□ -0.26
TRAF4-206ENST00000454852 TRPM4Q8TD43 1214 aa13.44□□□□□ -0.26
TRAF4-206ENST00000454852 SDR42E1Q8WUS8 393 aa13.44□□□□□ -0.26
TRAF4-206ENST00000454852 TDRD3Q9H7E2 651 aaKnown RBP13.44□□□□□ -0.26
TRAF4-206ENST00000454852 TMOD2Q9NZR1 351 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms