RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 FTOQ9C0B1 505 aaKnown RBP eCLIP15.98■□□□□ 0.15
CLK3-203ENST00000454830 CFAP45Q9UL16 551 aa15.98■□□□□ 0.15
CLK3-203ENST00000454830 CYP2D7A0A087X1C5 515 aa15.97■□□□□ 0.15
CLK3-203ENST00000454830 TXNRD3Q86VQ6 643 aa15.97■□□□□ 0.15
CLK3-203ENST00000454830 SMARCC2Q8TAQ2 1214 aa15.97■□□□□ 0.15
CLK3-203ENST00000454830 PHKBQ93100 1093 aa15.97■□□□□ 0.15
CLK3-203ENST00000454830 ZSCAN16Q9H4T2 348 aaPredicted RBP15.97■□□□□ 0.15
CLK3-203ENST00000454830 LEO1Q8WVC0 666 aaPredicted RBP15.97■□□□□ 0.15
CLK3-203ENST00000454830 FBXW7Q969H0 707 aa15.97■□□□□ 0.15
CLK3-203ENST00000454830 ZSWIM5Q9P217 1185 aa15.97■□□□□ 0.15
CLK3-203ENST00000454830 AKAP11Q9UKA4 1901 aa15.97■□□□□ 0.15
CLK3-203ENST00000454830 SERPINB2P05120 415 aa15.97■□□□□ 0.15
CLK3-203ENST00000454830 PRDX5P30044 214 aa15.97■□□□□ 0.15
CLK3-203ENST00000454830 TMEM87AQ8NBN3 555 aa15.97■□□□□ 0.15
CLK3-203ENST00000454830 NKX2-3Q8TAU0 364 aa15.97■□□□□ 0.15
CLK3-203ENST00000454830 AGXT2Q9BYV1 514 aa15.97■□□□□ 0.15
CLK3-203ENST00000454830 KRT23Q9C075 422 aa15.96■□□□□ 0.15
CLK3-203ENST00000454830 CARMIL3Q8ND23 1372 aa15.96■□□□□ 0.15
CLK3-203ENST00000454830 MYO5AQ9Y4I1 1855 aaKnown RBP15.96■□□□□ 0.15
CLK3-203ENST00000454830 ME1P48163 572 aa15.96■□□□□ 0.15
CLK3-203ENST00000454830 RESTQ13127 1097 aa15.96■□□□□ 0.15
CLK3-203ENST00000454830 CKAP2LQ8IYA6 745 aa15.96■□□□□ 0.15
CLK3-203ENST00000454830 CNNM2Q9H8M5 875 aa15.96■□□□□ 0.15
CLK3-203ENST00000454830 BTAF1O14981 1849 aa15.96■□□□□ 0.14
CLK3-203ENST00000454830 PTMAP06454 111 aaKnown RBP15.95■□□□□ 0.14
CLK3-203ENST00000454830 LIG1P18858 919 aa15.95■□□□□ 0.14
CLK3-203ENST00000454830 PPARAQ07869 468 aa15.95■□□□□ 0.14
CLK3-203ENST00000454830 WTAPQ15007 396 aa15.95■□□□□ 0.14
CLK3-203ENST00000454830 PRR5LQ6MZQ0 368 aa15.95■□□□□ 0.14
CLK3-203ENST00000454830 RNF41Q9H4P4 317 aaPredicted RBP15.95■□□□□ 0.14
CLK3-203ENST00000454830 DACT1Q9NYF0 836 aa15.95■□□□□ 0.14
CLK3-203ENST00000454830 C6orf229H3BNL8 230 aa15.95■□□□□ 0.14
CLK3-203ENST00000454830 TRIM29Q14134 588 aa15.95■□□□□ 0.14
CLK3-203ENST00000454830 TMEM87BQ96K49 555 aa15.95■□□□□ 0.14
CLK3-203ENST00000454830 ZNF396Q96N95 335 aaPredicted RBP15.95■□□□□ 0.14
CLK3-203ENST00000454830 NUP62CLQ9H1M0 184 aa15.95■□□□□ 0.14
CLK3-203ENST00000454830 SH2B2O14492 632 aaPredicted RBP15.95■□□□□ 0.14
CLK3-203ENST00000454830 APOA5Q6Q788 366 aa15.95■□□□□ 0.14
CLK3-203ENST00000454830 AIFM3Q96NN9 605 aa15.95■□□□□ 0.14
CLK3-203ENST00000454830 SLC26A6Q9BXS9 759 aa15.95■□□□□ 0.14
CLK3-203ENST00000454830 EP400Q96L91 3159 aa15.94■□□□□ 0.14
CLK3-203ENST00000454830 UFL1O94874 794 aa15.94■□□□□ 0.14
CLK3-203ENST00000454830 IARSP41252 1262 aaKnown RBP15.94■□□□□ 0.14
CLK3-203ENST00000454830 MECOMQ03112 1051 aa15.94■□□□□ 0.14
CLK3-203ENST00000454830 GRAPQ13588 217 aa15.94■□□□□ 0.14
CLK3-203ENST00000454830 GRAPLQ8TC17 118 aaPredicted RBP15.94■□□□□ 0.14
CLK3-203ENST00000454830 ALG1Q9BT22 464 aa15.94■□□□□ 0.14
CLK3-203ENST00000454830 SMIM22K7EJ46 135 aa15.94■□□□□ 0.14
CLK3-203ENST00000454830 TNMDQ9H2S6 317 aa15.94■□□□□ 0.14
CLK3-203ENST00000454830 HPS5Q9UPZ3 1129 aa15.94■□□□□ 0.14
CLK3-203ENST00000454830 CDKL5O76039 1030 aa15.94■□□□□ 0.14
CLK3-203ENST00000454830 ALX1Q15699 326 aa15.94■□□□□ 0.14
CLK3-203ENST00000454830 CMTR1Q8N1G2 835 aaKnown RBP15.94■□□□□ 0.14
CLK3-203ENST00000454830 APBA3O96018 575 aa15.93■□□□□ 0.14
CLK3-203ENST00000454830 GYS1P13807 737 aa15.93■□□□□ 0.14
CLK3-203ENST00000454830 FDPSP14324 419 aaKnown RBP15.93■□□□□ 0.14
CLK3-203ENST00000454830 CCDC173Q0VFZ6 552 aa15.93■□□□□ 0.14
CLK3-203ENST00000454830 STK38Q15208 465 aa15.93■□□□□ 0.14
CLK3-203ENST00000454830 TXNRD1Q16881 649 aa15.93■□□□□ 0.14
CLK3-203ENST00000454830 FBXO33Q7Z6M2 555 aa15.93■□□□□ 0.14
CLK3-203ENST00000454830 MPNDQ8N594 471 aa15.93■□□□□ 0.14
CLK3-203ENST00000454830 USP17L12C9JPN9 530 aa15.93■□□□□ 0.14
CLK3-203ENST00000454830 USP17L21D6R901 530 aa15.93■□□□□ 0.14
CLK3-203ENST00000454830 USP28Q96RU2 1077 aa15.93■□□□□ 0.14
CLK3-203ENST00000454830 NOL10Q9BSC4 688 aaKnown RBP15.93■□□□□ 0.14
CLK3-203ENST00000454830 LETM1O95202 739 aaPredicted RBP15.92■□□□□ 0.14
CLK3-203ENST00000454830 CRNKL1Q9BZJ0 848 aaKnown RBP15.92■□□□□ 0.14
CLK3-203ENST00000454830 MTMR7Q9Y216 660 aa15.92■□□□□ 0.14
CLK3-203ENST00000454830 DDX60Q8IY21 1712 aaKnown RBP15.92■□□□□ 0.14
CLK3-203ENST00000454830 ESR2Q92731 530 aa15.92■□□□□ 0.14
CLK3-203ENST00000454830 MYH7P12883 1935 aa15.92■□□□□ 0.14
CLK3-203ENST00000454830 PNPLA7Q6ZV29 1317 aa15.92■□□□□ 0.14
CLK3-203ENST00000454830 USP5P45974 858 aa15.92■□□□□ 0.14
CLK3-203ENST00000454830 COL4A1P02462 1669 aa15.92■□□□□ 0.14
CLK3-203ENST00000454830 LDHBP07195 334 aaKnown RBP15.91■□□□□ 0.14
CLK3-203ENST00000454830 ADRA2BP18089 450 aa15.91■□□□□ 0.14
CLK3-203ENST00000454830 CDC27P30260 824 aa15.91■□□□□ 0.14
CLK3-203ENST00000454830 CCDC73Q6ZRK6 1079 aa15.91■□□□□ 0.14
CLK3-203ENST00000454830 ZMYM6O95789 1325 aa15.91■□□□□ 0.14
CLK3-203ENST00000454830 TM4SF1P30408 202 aa15.91■□□□□ 0.14
CLK3-203ENST00000454830 LY9Q9HBG7 655 aa15.91■□□□□ 0.14
CLK3-203ENST00000454830 ATRNO75882 1429 aa15.91■□□□□ 0.14
CLK3-203ENST00000454830 ONECUT3O60422 494 aaPredicted RBP15.91■□□□□ 0.14
CLK3-203ENST00000454830 AKAP17AQ02040 695 aaKnown RBP15.91■□□□□ 0.14
CLK3-203ENST00000454830 MAP3K11Q16584 847 aa15.91■□□□□ 0.14
CLK3-203ENST00000454830 ZNF804AQ7Z570 1209 aa15.91■□□□□ 0.14
CLK3-203ENST00000454830 ATP2B1P20020 1258 aa15.9■□□□□ 0.14
CLK3-203ENST00000454830 SSRP1Q08945 709 aaKnown RBP15.9■□□□□ 0.14
CLK3-203ENST00000454830 RTN1Q16799 776 aa15.9■□□□□ 0.14
CLK3-203ENST00000454830 MSL1Q68DK7 614 aa15.9■□□□□ 0.14
CLK3-203ENST00000454830 IGDCC4Q8TDY8 1250 aa15.9■□□□□ 0.14
CLK3-203ENST00000454830 PIBF1Q8WXW3 757 aa15.9■□□□□ 0.14
CLK3-203ENST00000454830 RBM17Q96I25 401 aaKnown RBP15.9■□□□□ 0.14
CLK3-203ENST00000454830 MCM9Q9NXL9 1143 aa15.9■□□□□ 0.14
CLK3-203ENST00000454830 XDHP47989 1333 aa15.9■□□□□ 0.14
CLK3-203ENST00000454830 G3V3G9 751 aa15.9■□□□□ 0.14
CLK3-203ENST00000454830 RIMBP2O15034 1052 aa15.9■□□□□ 0.14
CLK3-203ENST00000454830 DIXDC1Q155Q3 683 aa15.9■□□□□ 0.14
CLK3-203ENST00000454830 DCAF8Q5TAQ9 597 aa15.9■□□□□ 0.14
CLK3-203ENST00000454830 TRIM22Q8IYM9 498 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms