RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 RGS22Q8NE09 1264 aa6.06□□□□□ -1.44
RIF1-207ENST00000454583 CCDC171Q6TFL3 1326 aa6.05□□□□□ -1.44
RIF1-207ENST00000454583 SHTN1A0MZ66 631 aa6.05□□□□□ -1.44
RIF1-207ENST00000454583 MAP4K4O95819 1239 aaPredicted RBP6.05□□□□□ -1.44
RIF1-207ENST00000454583 HSPD1P10809 573 aaKnown RBP6.05□□□□□ -1.44
RIF1-207ENST00000454583 FUT2Q10981 343 aa6.05□□□□□ -1.44
RIF1-207ENST00000454583 MOGSQ13724 837 aa6.05□□□□□ -1.44
RIF1-207ENST00000454583 TOB2Q14106 344 aaPredicted RBP6.05□□□□□ -1.44
RIF1-207ENST00000454583 SEC23AQ15436 765 aa6.05□□□□□ -1.44
RIF1-207ENST00000454583 HELBQ8NG08 1087 aaPredicted RBP6.05□□□□□ -1.44
RIF1-207ENST00000454583 CNKSR1Q969H4 720 aa6.05□□□□□ -1.44
RIF1-207ENST00000454583 ZSWIM6Q9HCJ5 1215 aa6.05□□□□□ -1.44
RIF1-207ENST00000454583 APBB1O00213 710 aa6.05□□□□□ -1.44
RIF1-207ENST00000454583 RNF113AO15541 343 aaKnown RBP6.05□□□□□ -1.44
RIF1-207ENST00000454583 PRDX5P30044 214 aa6.05□□□□□ -1.44
RIF1-207ENST00000454583 TM6SF1Q9BZW5 370 aa6.05□□□□□ -1.44
RIF1-207ENST00000454583 FAM217BQ9NTX9 383 aaPredicted RBP6.05□□□□□ -1.44
RIF1-207ENST00000454583 ZNF112Q9UJU3 913 aa6.05□□□□□ -1.44
RIF1-207ENST00000454583 SNX14Q9Y5W7 946 aa6.05□□□□□ -1.44
RIF1-207ENST00000454583 PSDA5PKW4 1024 aaPredicted RBP6.05□□□□□ -1.44
RIF1-207ENST00000454583 CYP21A2P08686 494 aa6.05□□□□□ -1.44
RIF1-207ENST00000454583 UQCRFS1P1P0C7P4 283 aa6.05□□□□□ -1.44
RIF1-207ENST00000454583 CUL4AQ13619 759 aa6.05□□□□□ -1.44
RIF1-207ENST00000454583 ADCK5Q3MIX3 580 aa6.05□□□□□ -1.44
RIF1-207ENST00000454583 BICDL1Q6ZP65 573 aa6.05□□□□□ -1.44
RIF1-207ENST00000454583 PODNQ7Z5L7 613 aa6.05□□□□□ -1.44
RIF1-207ENST00000454583 LCORLQ8N3X6 602 aa6.05□□□□□ -1.44
RIF1-207ENST00000454583 ECE2O60344 883 aa6.04□□□□□ -1.44
RIF1-207ENST00000454583 CDC45O75419 566 aa6.04□□□□□ -1.44
RIF1-207ENST00000454583 ANAPC15P60006 121 aa6.04□□□□□ -1.44
RIF1-207ENST00000454583 RCSD1Q6JBY9 416 aa6.04□□□□□ -1.44
RIF1-207ENST00000454583 TTLL6Q8N841 843 aa6.04□□□□□ -1.44
RIF1-207ENST00000454583 SERPINA10Q9UK55 444 aa6.04□□□□□ -1.44
RIF1-207ENST00000454583 HPS5Q9UPZ3 1129 aa6.04□□□□□ -1.44
RIF1-207ENST00000454583 DDX46Q7L014 1031 aaKnown RBP6.04□□□□□ -1.44
RIF1-207ENST00000454583 TBC1D10CQ8IV04 446 aa6.04□□□□□ -1.44
RIF1-207ENST00000454583 RTKN2Q8IZC4 609 aa6.04□□□□□ -1.44
RIF1-207ENST00000454583 CLASRPQ8N2M8 674 aaKnown RBP6.04□□□□□ -1.44
RIF1-207ENST00000454583 IL27Q8NEV9 243 aa6.04□□□□□ -1.44
RIF1-207ENST00000454583 APPBP2Q92624 585 aa6.04□□□□□ -1.44
RIF1-207ENST00000454583 MXD3Q9BW11 206 aa6.04□□□□□ -1.44
RIF1-207ENST00000454583 DAGLAQ9Y4D2 1042 aa6.04□□□□□ -1.44
RIF1-207ENST00000454583 EDIL3O43854 480 aa6.03□□□□□ -1.44
RIF1-207ENST00000454583 IARSP41252 1262 aaKnown RBP6.03□□□□□ -1.44
RIF1-207ENST00000454583 G3BP1Q13283 466 aaKnown RBP eCLIP6.03□□□□□ -1.44
RIF1-207ENST00000454583 FKBP1CQ5VVH2 108 aa6.03□□□□□ -1.44
RIF1-207ENST00000454583 CCDC85AQ96PX6 553 aaPredicted RBP6.03□□□□□ -1.44
RIF1-207ENST00000454583 EHD4Q9H223 541 aa6.03□□□□□ -1.44
RIF1-207ENST00000454583 TCP11L1Q9NUJ3 509 aa6.03□□□□□ -1.44
RIF1-207ENST00000454583 ZNF532Q9HCE3 1301 aa6.03□□□□□ -1.44
RIF1-207ENST00000454583 H0YIN7 160 aa6.03□□□□□ -1.44
RIF1-207ENST00000454583 SNHG28P0DPA3 235 aa6.03□□□□□ -1.44
RIF1-207ENST00000454583 IGHMBP2P38935 993 aaKnown RBP6.03□□□□□ -1.44
RIF1-207ENST00000454583 RASSF7Q02833 373 aa6.03□□□□□ -1.44
RIF1-207ENST00000454583 METTL24Q5JXM2 366 aa6.03□□□□□ -1.44
RIF1-207ENST00000454583 CTR9Q6PD62 1173 aa6.03□□□□□ -1.44
RIF1-207ENST00000454583 STAG1Q8WVM7 1258 aa6.03□□□□□ -1.44
RIF1-207ENST00000454583 BBXQ8WY36 941 aaPredicted RBP6.03□□□□□ -1.44
RIF1-207ENST00000454583 PIM2Q9P1W9 311 aa6.03□□□□□ -1.44
RIF1-207ENST00000454583 PASKQ96RG2 1323 aa6.03□□□□□ -1.44
RIF1-207ENST00000454583 TBC1D12O60347 775 aa6.03□□□□□ -1.44
RIF1-207ENST00000454583 HIBADHP31937 336 aaKnown RBP6.03□□□□□ -1.44
RIF1-207ENST00000454583 MAP3K11Q16584 847 aa6.03□□□□□ -1.44
RIF1-207ENST00000454583 AOC3Q16853 763 aa6.03□□□□□ -1.44
RIF1-207ENST00000454583 NBPF11Q86T75 865 aa6.03□□□□□ -1.44
RIF1-207ENST00000454583 AGBL3Q8NEM8 1001 aa6.03□□□□□ -1.44
RIF1-207ENST00000454583 IGDCC4Q8TDY8 1250 aa6.03□□□□□ -1.44
RIF1-207ENST00000454583 MTA3Q9BTC8 594 aa6.03□□□□□ -1.44
RIF1-207ENST00000454583 GGA1Q9UJY5 639 aa6.03□□□□□ -1.44
RIF1-207ENST00000454583 NEDD4P46934 1319 aa6.03□□□□□ -1.44
RIF1-207ENST00000454583 PITPNM2Q9BZ72 1349 aa6.03□□□□□ -1.44
RIF1-207ENST00000454583 CENPFP49454 3210 aa6.02□□□□□ -1.44
RIF1-207ENST00000454583 M0R2N6 131 aa6.02□□□□□ -1.45
RIF1-207ENST00000454583 SLC27A2O14975 620 aa6.02□□□□□ -1.45
RIF1-207ENST00000454583 CTDNEP1O95476 244 aa6.02□□□□□ -1.45
RIF1-207ENST00000454583 CCDC93Q567U6 631 aa6.02□□□□□ -1.45
RIF1-207ENST00000454583 RSBN1LQ6PCB5 846 aaPredicted RBP6.02□□□□□ -1.45
RIF1-207ENST00000454583 ZFPM1Q8IX07 1006 aa6.02□□□□□ -1.45
RIF1-207ENST00000454583 IL17RBQ9NRM6 502 aa6.02□□□□□ -1.45
RIF1-207ENST00000454583 PDCD11Q14690 1871 aaKnown RBP6.02□□□□□ -1.45
RIF1-207ENST00000454583 CCDC129Q6ZRS4 1044 aa6.02□□□□□ -1.45
RIF1-207ENST00000454583 DPF2Q92785 391 aa6.02□□□□□ -1.45
RIF1-207ENST00000454583 BOLA2Q9H3K6 86 aa6.02□□□□□ -1.45
RIF1-207ENST00000454583 CEP126Q9P2H0 1117 aa6.02□□□□□ -1.45
RIF1-207ENST00000454583 FLT1P17948 1338 aa6.02□□□□□ -1.45
RIF1-207ENST00000454583 C21orf2O43822 256 aa6.02□□□□□ -1.45
RIF1-207ENST00000454583 ORC4O43929 436 aa6.02□□□□□ -1.45
RIF1-207ENST00000454583 PRR29P0C7W0 189 aa6.02□□□□□ -1.45
RIF1-207ENST00000454583 CXCL9Q07325 125 aa6.02□□□□□ -1.45
RIF1-207ENST00000454583 NPY5RQ15761 445 aa6.02□□□□□ -1.45
RIF1-207ENST00000454583 NTRK3Q16288 839 aa6.02□□□□□ -1.45
RIF1-207ENST00000454583 MCMDC2Q4G0Z9 681 aa6.02□□□□□ -1.45
RIF1-207ENST00000454583 MPNDQ8N594 471 aa6.02□□□□□ -1.45
RIF1-207ENST00000454583 MTMR8Q96EF0 704 aa6.02□□□□□ -1.45
RIF1-207ENST00000454583 DCP1AQ9NPI6 582 aaPredicted RBP6.02□□□□□ -1.45
RIF1-207ENST00000454583 ZDHHC9Q9Y397 364 aa6.02□□□□□ -1.45
RIF1-207ENST00000454583 FSD2A1L4K1 749 aa6.01□□□□□ -1.45
RIF1-207ENST00000454583 PSMD14O00487 310 aa6.01□□□□□ -1.45
RIF1-207ENST00000454583 ZFYP08048 801 aaPredicted RBP6.01□□□□□ -1.45
RIF1-207ENST00000454583 GHRHRQ02643 423 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms