RNA–Protein interactions for RNA: ENST00000453705.1

BRCC3-208, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 2,694 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-208ENST00000453705 ATRIPQ8WXE1 791 aa9.22□□□□□ -0.93
BRCC3-208ENST00000453705 RNF34Q969K3 372 aa9.22□□□□□ -0.93
BRCC3-208ENST00000453705 MRGBPQ9NV56 204 aa9.22□□□□□ -0.93
BRCC3-208ENST00000453705 NRAPQ86VF7 1730 aa9.22□□□□□ -0.93
BRCC3-208ENST00000453705 SRCAPQ6ZRS2 3230 aa9.21□□□□□ -0.93
BRCC3-208ENST00000453705 SYNRGQ9UMZ2 1314 aa9.21□□□□□ -0.93
BRCC3-208ENST00000453705 FGRP09769 529 aa9.21□□□□□ -0.93
BRCC3-208ENST00000453705 TMEM95Q3KNT9 176 aa9.21□□□□□ -0.93
BRCC3-208ENST00000453705 SNX32Q86XE0 403 aa9.21□□□□□ -0.93
BRCC3-208ENST00000453705 TMEM57Q8N5G2 664 aa9.21□□□□□ -0.93
BRCC3-208ENST00000453705 SAMD3Q8N6K7 520 aa9.21□□□□□ -0.93
BRCC3-208ENST00000453705 TSPYL6Q8N831 410 aa9.21□□□□□ -0.93
BRCC3-208ENST00000453705 RTF1Q92541 710 aaKnown RBP9.21□□□□□ -0.93
BRCC3-208ENST00000453705 TMCC3Q9ULS5 477 aa9.21□□□□□ -0.93
BRCC3-208ENST00000453705 PCDHB8Q9UN66 801 aa9.21□□□□□ -0.93
BRCC3-208ENST00000453705 RABGAP1Q9Y3P9 1069 aa9.21□□□□□ -0.93
BRCC3-208ENST00000453705 PCDHB13Q9Y5F0 798 aa9.21□□□□□ -0.93
BRCC3-208ENST00000453705 NWD2Q9ULI1 1742 aa9.21□□□□□ -0.93
BRCC3-208ENST00000453705 FAM221BA6H8Z2 402 aa9.21□□□□□ -0.94
BRCC3-208ENST00000453705 TAF7Q15545 349 aaPredicted RBP9.21□□□□□ -0.94
BRCC3-208ENST00000453705 PLEKHO1Q53GL0 409 aaPredicted RBP9.21□□□□□ -0.94
BRCC3-208ENST00000453705 TMX1Q9H3N1 280 aa9.21□□□□□ -0.94
BRCC3-208ENST00000453705 LUZP4Q9P127 313 aa9.21□□□□□ -0.94
BRCC3-208ENST00000453705 RABL2BQ9UNT1 228 aa9.21□□□□□ -0.94
BRCC3-208ENST00000453705 COL16A1Q07092 1604 aaPredicted RBP9.21□□□□□ -0.94
BRCC3-208ENST00000453705 HMMRO75330 724 aa9.2□□□□□ -0.94
BRCC3-208ENST00000453705 INMTO95050 263 aa9.2□□□□□ -0.94
BRCC3-208ENST00000453705 ATP2B4P23634 1241 aa9.2□□□□□ -0.94
BRCC3-208ENST00000453705 TBC1D10BQ4KMP7 808 aaPredicted RBP9.2□□□□□ -0.94
BRCC3-208ENST00000453705 PHLPP1O60346 1717 aa9.2□□□□□ -0.94
BRCC3-208ENST00000453705 FAM83GA6ND36 823 aa9.2□□□□□ -0.94
BRCC3-208ENST00000453705 ALDH1L1O75891 902 aa9.2□□□□□ -0.94
BRCC3-208ENST00000453705 KCNA2P16389 499 aa9.2□□□□□ -0.94
BRCC3-208ENST00000453705 HMGN5P82970 282 aaKnown RBP9.2□□□□□ -0.94
BRCC3-208ENST00000453705 TKFCQ3LXA3 575 aa9.2□□□□□ -0.94
BRCC3-208ENST00000453705 C8orf34Q49A92 452 aa9.2□□□□□ -0.94
BRCC3-208ENST00000453705 C16orf87Q6PH81 154 aa9.2□□□□□ -0.94
BRCC3-208ENST00000453705 FRAT1Q92837 279 aaPredicted RBP9.2□□□□□ -0.94
BRCC3-208ENST00000453705 DDX17Q92841 729 aaKnown RBP9.2□□□□□ -0.94
BRCC3-208ENST00000453705 GCC1Q96CN9 775 aa9.2□□□□□ -0.94
BRCC3-208ENST00000453705 FAM13BQ9NYF5 915 aa9.2□□□□□ -0.94
BRCC3-208ENST00000453705 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.2□□□□□ -0.94
BRCC3-208ENST00000453705 ABCF2Q9UG63 623 aa9.2□□□□□ -0.94
BRCC3-208ENST00000453705 ANAPC4Q9UJX5 808 aa9.2□□□□□ -0.94
BRCC3-208ENST00000453705 TNNQ9UQP3 1299 aa9.2□□□□□ -0.94
BRCC3-208ENST00000453705 EPB42P16452 691 aa9.19□□□□□ -0.94
BRCC3-208ENST00000453705 CCT2P78371 535 aaKnown RBP9.19□□□□□ -0.94
BRCC3-208ENST00000453705 PLEKHG4Q58EX7 1191 aa9.19□□□□□ -0.94
BRCC3-208ENST00000453705 PPP2R2DQ66LE6 453 aa9.19□□□□□ -0.94
BRCC3-208ENST00000453705 NDUFAF2Q8N183 169 aa9.19□□□□□ -0.94
BRCC3-208ENST00000453705 IL17REQ8NFR9 667 aa9.19□□□□□ -0.94
BRCC3-208ENST00000453705 TAF4BQ92750 862 aa9.19□□□□□ -0.94
BRCC3-208ENST00000453705 TBC1D20Q96BZ9 403 aa9.19□□□□□ -0.94
BRCC3-208ENST00000453705 SRPK1Q96SB4 655 aaKnown RBP9.19□□□□□ -0.94
BRCC3-208ENST00000453705 THUMPD2Q9BTF0 503 aaKnown RBP9.19□□□□□ -0.94
BRCC3-208ENST00000453705 C22orf23Q9BZE7 217 aa9.19□□□□□ -0.94
BRCC3-208ENST00000453705 NUP188Q5SRE5 1749 aa9.19□□□□□ -0.94
BRCC3-208ENST00000453705 ZNF831Q5JPB2 1677 aa9.19□□□□□ -0.94
BRCC3-208ENST00000453705 TOM1O60784 492 aa9.19□□□□□ -0.94
BRCC3-208ENST00000453705 OSBPP22059 807 aa9.19□□□□□ -0.94
BRCC3-208ENST00000453705 CLCN1P35523 988 aa9.19□□□□□ -0.94
BRCC3-208ENST00000453705 MECOMQ03112 1051 aa9.19□□□□□ -0.94
BRCC3-208ENST00000453705 TTF1Q15361 905 aaPredicted RBP9.19□□□□□ -0.94
BRCC3-208ENST00000453705 ACBD5Q5T8D3 534 aaPredicted RBP9.19□□□□□ -0.94
BRCC3-208ENST00000453705 FLCNQ8NFG4 579 aa9.19□□□□□ -0.94
BRCC3-208ENST00000453705 JPH3Q8WXH2 748 aaPredicted RBP9.19□□□□□ -0.94
BRCC3-208ENST00000453705 JARID2Q92833 1246 aaPredicted RBP9.19□□□□□ -0.94
BRCC3-208ENST00000453705 DUSP9Q99956 384 aaKnown RBP9.19□□□□□ -0.94
BRCC3-208ENST00000453705 FAM217BQ9NTX9 383 aaPredicted RBP9.19□□□□□ -0.94
BRCC3-208ENST00000453705 COL5A2P05997 1499 aaPredicted RBP9.19□□□□□ -0.94
BRCC3-208ENST00000453705 PRMT3O60678 531 aa9.18□□□□□ -0.94
BRCC3-208ENST00000453705 MYL3P08590 195 aa9.18□□□□□ -0.94
BRCC3-208ENST00000453705 PPP2R5AQ15172 486 aa9.18□□□□□ -0.94
BRCC3-208ENST00000453705 OGFOD1Q8N543 542 aa9.18□□□□□ -0.94
BRCC3-208ENST00000453705 EPS8L1Q8TE68 723 aa9.18□□□□□ -0.94
BRCC3-208ENST00000453705 CHMP4CQ96CF2 233 aa9.18□□□□□ -0.94
BRCC3-208ENST00000453705 TOGARAM1Q9Y4F4 1720 aa9.18□□□□□ -0.94
BRCC3-208ENST00000453705 A6NJY4 79 aa9.18□□□□□ -0.94
BRCC3-208ENST00000453705 PPP2R5BQ15173 497 aa9.18□□□□□ -0.94
BRCC3-208ENST00000453705 VPS72Q15906 364 aa9.18□□□□□ -0.94
BRCC3-208ENST00000453705 EFCAB3Q8N7B9 438 aa9.18□□□□□ -0.94
BRCC3-208ENST00000453705 ANKRD24Q8TF21 1146 aa9.18□□□□□ -0.94
BRCC3-208ENST00000453705 SLX1AQ9BQ83 275 aa9.18□□□□□ -0.94
BRCC3-208ENST00000453705 RMI1Q9H9A7 625 aa9.18□□□□□ -0.94
BRCC3-208ENST00000453705 GPHNQ9NQX3 736 aaPredicted RBP9.18□□□□□ -0.94
BRCC3-208ENST00000453705 PARP2Q9UGN5 583 aa9.18□□□□□ -0.94
BRCC3-208ENST00000453705 PPP2R3BQ9Y5P8 575 aa9.18□□□□□ -0.94
BRCC3-208ENST00000453705 MEGF6O75095 1541 aa9.18□□□□□ -0.94
BRCC3-208ENST00000453705 NBNO60934 754 aa9.18□□□□□ -0.94
BRCC3-208ENST00000453705 CAND2O75155 1236 aa9.18□□□□□ -0.94
BRCC3-208ENST00000453705 MYL1P05976 194 aa9.18□□□□□ -0.94
BRCC3-208ENST00000453705 GLULP15104 373 aa9.18□□□□□ -0.94
BRCC3-208ENST00000453705 ZNF76P36508 570 aa9.18□□□□□ -0.94
BRCC3-208ENST00000453705 CCT4P50991 539 aaKnown RBP9.18□□□□□ -0.94
BRCC3-208ENST00000453705 PSMC1P62191 440 aaKnown RBP9.18□□□□□ -0.94
BRCC3-208ENST00000453705 FAM83BQ5T0W9 1011 aa9.18□□□□□ -0.94
BRCC3-208ENST00000453705 MCM10Q7L590 875 aa9.18□□□□□ -0.94
BRCC3-208ENST00000453705 ZNF710Q8N1W2 664 aa9.18□□□□□ -0.94
BRCC3-208ENST00000453705 SNX21Q969T3 373 aa9.18□□□□□ -0.94
BRCC3-208ENST00000453705 GEMIN8Q9NWZ8 242 aaKnown RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms