RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 ANKRD34AQ69YU3 496 aa6.83□□□□□ -1.32
LINC00393-202ENST00000452852 DDX54Q8TDD1 881 aaKnown RBP6.83□□□□□ -1.32
LINC00393-202ENST00000452852 GIPC2Q8TF65 315 aa6.83□□□□□ -1.32
LINC00393-202ENST00000452852 USP35Q9P2H5 1018 aa6.83□□□□□ -1.32
LINC00393-202ENST00000452852 AKAP2Q9Y2D5 859 aa6.83□□□□□ -1.32
LINC00393-202ENST00000452852 CEP164Q9UPV0 1460 aa6.83□□□□□ -1.32
LINC00393-202ENST00000452852 WDR62O43379 1518 aa6.82□□□□□ -1.32
LINC00393-202ENST00000452852 SART1O43290 800 aaKnown RBP6.82□□□□□ -1.32
LINC00393-202ENST00000452852 ECEL1O95672 775 aa6.82□□□□□ -1.32
LINC00393-202ENST00000452852 XRCC5P13010 732 aaKnown RBP6.82□□□□□ -1.32
LINC00393-202ENST00000452852 PREPP48147 710 aa6.82□□□□□ -1.32
LINC00393-202ENST00000452852 FDX2Q6P4F2 183 aa6.82□□□□□ -1.32
LINC00393-202ENST00000452852 UTP4Q969X6 686 aaKnown RBP6.82□□□□□ -1.32
LINC00393-202ENST00000452852 ZFYVE1Q9HBF4 777 aa6.82□□□□□ -1.32
LINC00393-202ENST00000452852 IGSF5Q9NSI5 407 aa6.82□□□□□ -1.32
LINC00393-202ENST00000452852 TOP2AP11388 1531 aaKnown RBP6.81□□□□□ -1.32
LINC00393-202ENST00000452852 COL17A1Q9UMD9 1497 aaPredicted RBP6.81□□□□□ -1.32
LINC00393-202ENST00000452852 COL19A1Q14993 1142 aa6.81□□□□□ -1.32
LINC00393-202ENST00000452852 UVSSAQ2YD98 709 aa6.81□□□□□ -1.32
LINC00393-202ENST00000452852 C12orf50Q8NA57 414 aaPredicted RBP6.81□□□□□ -1.32
LINC00393-202ENST00000452852 SMG8Q8ND04 991 aaKnown RBP6.81□□□□□ -1.32
LINC00393-202ENST00000452852 C3orf58Q8NDZ4 430 aa6.81□□□□□ -1.32
LINC00393-202ENST00000452852 MYRFLQ96LU7 910 aa6.81□□□□□ -1.32
LINC00393-202ENST00000452852 CORO1BQ9BR76 489 aa6.81□□□□□ -1.32
LINC00393-202ENST00000452852 SUGCTQ9HAC7 445 aa6.81□□□□□ -1.32
LINC00393-202ENST00000452852 CYP4F12Q9HCS2 524 aa6.81□□□□□ -1.32
LINC00393-202ENST00000452852 SPG7Q9UQ90 795 aa6.81□□□□□ -1.32
LINC00393-202ENST00000452852 RAXQ9Y2V3 346 aa6.81□□□□□ -1.32
LINC00393-202ENST00000452852 FANCD2Q9BXW9 1451 aa6.8□□□□□ -1.32
LINC00393-202ENST00000452852 GIPC1O14908 333 aa6.8□□□□□ -1.32
LINC00393-202ENST00000452852 DHX15O43143 795 aaKnown RBP6.8□□□□□ -1.32
LINC00393-202ENST00000452852 DRD2P14416 443 aa6.8□□□□□ -1.32
LINC00393-202ENST00000452852 AP3B2Q13367 1082 aa6.8□□□□□ -1.32
LINC00393-202ENST00000452852 EAPPQ56P03 285 aaPredicted RBP6.8□□□□□ -1.32
LINC00393-202ENST00000452852 NPAS4Q8IUM7 802 aa6.8□□□□□ -1.32
LINC00393-202ENST00000452852 SRCIN1Q9C0H9 1055 aa6.8□□□□□ -1.32
LINC00393-202ENST00000452852 TMEM39AQ9NV64 488 aa6.8□□□□□ -1.32
LINC00393-202ENST00000452852 GPN3Q9UHW5 284 aaPredicted RBP6.8□□□□□ -1.32
LINC00393-202ENST00000452852 RSF1Q96T23 1441 aaPredicted RBP6.79□□□□□ -1.32
LINC00393-202ENST00000452852 ARID1BQ8NFD5 2236 aaPredicted RBP6.79□□□□□ -1.32
LINC00393-202ENST00000452852 PRPF40AO75400 957 aaKnown RBP6.79□□□□□ -1.32
LINC00393-202ENST00000452852 TIAF1O95411 115 aa6.79□□□□□ -1.32
LINC00393-202ENST00000452852 BMP3P12645 472 aa6.79□□□□□ -1.32
LINC00393-202ENST00000452852 GSTT1P30711 240 aa6.79□□□□□ -1.32
LINC00393-202ENST00000452852 TAGLNQ01995 201 aaKnown RBP6.79□□□□□ -1.32
LINC00393-202ENST00000452852 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.79□□□□□ -1.32
LINC00393-202ENST00000452852 FMNL2Q96PY5 1086 aa6.79□□□□□ -1.32
LINC00393-202ENST00000452852 C12orf49Q9H741 205 aa6.79□□□□□ -1.32
LINC00393-202ENST00000452852 RNF19AQ9NV58 838 aa6.79□□□□□ -1.32
LINC00393-202ENST00000452852 STOML1Q9UBI4 398 aa6.79□□□□□ -1.32
LINC00393-202ENST00000452852 GAS2O43903 313 aaKnown RBP6.78□□□□□ -1.32
LINC00393-202ENST00000452852 PPP2R3AQ06190 1150 aa6.78□□□□□ -1.32
LINC00393-202ENST00000452852 SOX4Q06945 474 aaPredicted RBP6.78□□□□□ -1.32
LINC00393-202ENST00000452852 PDE3AQ14432 1141 aa6.78□□□□□ -1.32
LINC00393-202ENST00000452852 FAM20CQ8IXL6 584 aa6.78□□□□□ -1.32
LINC00393-202ENST00000452852 DUSP9Q99956 384 aaKnown RBP6.78□□□□□ -1.32
LINC00393-202ENST00000452852 KRTAP4-2Q9BYR5 136 aa6.78□□□□□ -1.32
LINC00393-202ENST00000452852 ZC3H12CQ9C0D7 883 aaKnown RBP6.78□□□□□ -1.32
LINC00393-202ENST00000452852 CFTRP13569 1480 aa6.78□□□□□ -1.32
LINC00393-202ENST00000452852 FSTP19883 344 aa6.77□□□□□ -1.33
LINC00393-202ENST00000452852 GNA15P30679 374 aa6.77□□□□□ -1.33
LINC00393-202ENST00000452852 HP1BP3Q5SSJ5 553 aaPredicted RBP6.77□□□□□ -1.33
LINC00393-202ENST00000452852 TPTE2Q6XPS3 522 aa6.77□□□□□ -1.33
LINC00393-202ENST00000452852 TRIM42Q8IWZ5 723 aa6.77□□□□□ -1.33
LINC00393-202ENST00000452852 C2CD4AQ8NCU7 369 aaPredicted RBP6.77□□□□□ -1.33
LINC00393-202ENST00000452852 FRMD6Q96NE9 622 aa6.77□□□□□ -1.33
LINC00393-202ENST00000452852 KCNF1Q9H3M0 494 aa6.77□□□□□ -1.33
LINC00393-202ENST00000452852 CCDC86Q9H6F5 360 aaKnown RBP6.77□□□□□ -1.33
LINC00393-202ENST00000452852 C7orf69Q9H7B7 122 aa6.77□□□□□ -1.33
LINC00393-202ENST00000452852 RAD18Q9NS91 495 aa6.77□□□□□ -1.33
LINC00393-202ENST00000452852 HMX2A2RU54 273 aa6.76□□□□□ -1.33
LINC00393-202ENST00000452852 FBXO24O75426 580 aa6.76□□□□□ -1.33
LINC00393-202ENST00000452852 GSTP1P09211 210 aaKnown RBP6.76□□□□□ -1.33
LINC00393-202ENST00000452852 USP17L7P0C7H9 530 aa6.76□□□□□ -1.33
LINC00393-202ENST00000452852 ADH5P11766 374 aa6.76□□□□□ -1.33
LINC00393-202ENST00000452852 LIG1P18858 919 aa6.76□□□□□ -1.33
LINC00393-202ENST00000452852 SGO2Q562F6 1265 aa6.76□□□□□ -1.33
LINC00393-202ENST00000452852 AKAP4Q5JQC9 854 aa6.76□□□□□ -1.33
LINC00393-202ENST00000452852 BEND4Q6ZU67 534 aa6.76□□□□□ -1.33
LINC00393-202ENST00000452852 CLEC10AQ8IUN9 316 aa6.76□□□□□ -1.33
LINC00393-202ENST00000452852 STK35Q8TDR2 534 aa6.76□□□□□ -1.33
LINC00393-202ENST00000452852 FAM8A1Q9UBU6 413 aa6.76□□□□□ -1.33
LINC00393-202ENST00000452852 HIF3AQ9Y2N7 669 aa6.76□□□□□ -1.33
LINC00393-202ENST00000452852 ENC1O14682 589 aa6.75□□□□□ -1.33
LINC00393-202ENST00000452852 AOC2O75106 756 aa6.75□□□□□ -1.33
LINC00393-202ENST00000452852 EIF4BP23588 611 aaKnown RBP6.75□□□□□ -1.33
LINC00393-202ENST00000452852 MAP4P27816 1152 aaKnown RBP6.75□□□□□ -1.33
LINC00393-202ENST00000452852 USP11P51784 963 aa6.75□□□□□ -1.33
LINC00393-202ENST00000452852 FGD1P98174 961 aa6.75□□□□□ -1.33
LINC00393-202ENST00000452852 ZNF326Q5BKZ1 582 aaKnown RBP6.75□□□□□ -1.33
LINC00393-202ENST00000452852 CDPF1Q6NVV7 123 aa6.75□□□□□ -1.33
LINC00393-202ENST00000452852 PDZD3Q86UT5 571 aa6.75□□□□□ -1.33
LINC00393-202ENST00000452852 SULF2Q8IWU5 870 aa6.75□□□□□ -1.33
LINC00393-202ENST00000452852 WDR89Q96FK6 387 aaPredicted RBP6.75□□□□□ -1.33
LINC00393-202ENST00000452852 NECAB3Q96P71 396 aaPredicted RBP6.75□□□□□ -1.33
LINC00393-202ENST00000452852 FAM83CQ9BQN1 747 aa6.75□□□□□ -1.33
LINC00393-202ENST00000452852 WDR18Q9BV38 432 aa6.75□□□□□ -1.33
LINC00393-202ENST00000452852 PPM1HQ9ULR3 514 aa6.75□□□□□ -1.33
LINC00393-202ENST00000452852 ZNF862O60290 1169 aa6.74□□□□□ -1.33
LINC00393-202ENST00000452852 PAGE1O75459 146 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms