RNA–Protein interactions for RNA: ENST00000452489.6

PTPA-223, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-223ENST00000452489 GOLGA6AQ9NYA3 693 aa21.26■□□□□ 0.99
PTPA-223ENST00000452489 RTEL1Q9NZ71 1219 aa21.26■□□□□ 0.99
PTPA-223ENST00000452489 SPECC1LQ69YQ0 1117 aa21.25■□□□□ 0.99
PTPA-223ENST00000452489 CALR3Q96L12 384 aaKnown RBP21.25■□□□□ 0.99
PTPA-223ENST00000452489 PFKFB1P16118 471 aa21.25■□□□□ 0.99
PTPA-223ENST00000452489 CCT2P78371 535 aaKnown RBP21.25■□□□□ 0.99
PTPA-223ENST00000452489 IQCA1Q86XH1 822 aa21.25■□□□□ 0.99
PTPA-223ENST00000452489 GSPT2Q8IYD1 628 aaKnown RBP21.25■□□□□ 0.99
PTPA-223ENST00000452489 NCOA5Q9HCD5 579 aaKnown RBP21.25■□□□□ 0.99
PTPA-223ENST00000452489 NEXMIFQ5QGS0 1516 aa21.25■□□□□ 0.99
PTPA-223ENST00000452489 NPATQ14207 1427 aa21.24■□□□□ 0.99
PTPA-223ENST00000452489 CALRP27797 417 aaKnown RBP21.24■□□□□ 0.99
PTPA-223ENST00000452489 AMOTL1Q8IY63 956 aa21.24■□□□□ 0.99
PTPA-223ENST00000452489 FSBPO95073 299 aa21.24■□□□□ 0.99
PTPA-223ENST00000452489 TUBB4BP68371 445 aa21.24■□□□□ 0.99
PTPA-223ENST00000452489 KIRREL3Q8IZU9 778 aa21.24■□□□□ 0.99
PTPA-223ENST00000452489 OTUD6BQ8N6M0 293 aa21.24■□□□□ 0.99
PTPA-223ENST00000452489 COG1Q8WTW3 980 aa21.24■□□□□ 0.99
PTPA-223ENST00000452489 RBM28Q9NW13 759 aaKnown RBP21.24■□□□□ 0.99
PTPA-223ENST00000452489 AGLP35573 1532 aa21.24■□□□□ 0.99
PTPA-223ENST00000452489 ZMYND10O75800 440 aa21.23■□□□□ 0.99
PTPA-223ENST00000452489 TBC1D8BQ0IIM8 1120 aa21.23■□□□□ 0.99
PTPA-223ENST00000452489 PPFIA1Q13136 1202 aa21.23■□□□□ 0.99
PTPA-223ENST00000452489 SEMA3FQ13275 785 aa21.23■□□□□ 0.99
PTPA-223ENST00000452489 EIF4A2Q14240 407 aaKnown RBP21.23■□□□□ 0.99
PTPA-223ENST00000452489 OTUD7BQ6GQQ9 843 aa21.23■□□□□ 0.99
PTPA-223ENST00000452489 MROH7-TTC4A0A0A0MT08 1334 aa21.23■□□□□ 0.99
PTPA-223ENST00000452489 POLR3DP05423 398 aaPredicted RBP21.23■□□□□ 0.99
PTPA-223ENST00000452489 CCNHP51946 323 aaPredicted RBP21.23■□□□□ 0.99
PTPA-223ENST00000452489 PNOCQ13519 176 aa21.23■□□□□ 0.99
PTPA-223ENST00000452489 TRIM6Q9C030 488 aaPredicted RBP21.23■□□□□ 0.99
PTPA-223ENST00000452489 HMG20BQ9P0W2 317 aa21.23■□□□□ 0.99
PTPA-223ENST00000452489 CLTCQ00610 1675 aaKnown RBP21.22■□□□□ 0.99
PTPA-223ENST00000452489 TUBBP07437 444 aa21.22■□□□□ 0.99
PTPA-223ENST00000452489 PIP4K2BP78356 416 aa21.22■□□□□ 0.99
PTPA-223ENST00000452489 PDE4BQ07343 736 aa21.22■□□□□ 0.99
PTPA-223ENST00000452489 WHAMMP3Q1A5X7 153 aa21.22■□□□□ 0.99
PTPA-223ENST00000452489 ARHGEF25Q86VW2 580 aa21.22■□□□□ 0.99
PTPA-223ENST00000452489 LLPHQ9BRT6 129 aaKnown RBP21.22■□□□□ 0.99
PTPA-223ENST00000452489 CENPHQ9H3R5 247 aa21.22■□□□□ 0.99
PTPA-223ENST00000452489 SPTLC2O15270 562 aa21.21■□□□□ 0.99
PTPA-223ENST00000452489 KIAA0754O94854 1291 aa21.21■□□□□ 0.99
PTPA-223ENST00000452489 WLSQ5T9L3 541 aa21.21■□□□□ 0.99
PTPA-223ENST00000452489 CRACR2AQ9BSW2 395 aa21.21■□□□□ 0.99
PTPA-223ENST00000452489 FSD1Q9BTV5 496 aa21.21■□□□□ 0.99
PTPA-223ENST00000452489 SNRKQ9NRH2 765 aa21.21■□□□□ 0.99
PTPA-223ENST00000452489 KLC4Q9NSK0 619 aa21.21■□□□□ 0.99
PTPA-223ENST00000452489 TUBE1Q9UJT0 475 aa21.21■□□□□ 0.99
PTPA-223ENST00000452489 MED23Q9ULK4 1368 aa21.21■□□□□ 0.99
PTPA-223ENST00000452489 KLHL33A6NCF5 533 aa21.21■□□□□ 0.99
PTPA-223ENST00000452489 CDC27P30260 824 aa21.21■□□□□ 0.99
PTPA-223ENST00000452489 AACSQ86V21 672 aa21.21■□□□□ 0.99
PTPA-223ENST00000452489 FMNL3Q8IVF7 1028 aa21.21■□□□□ 0.99
PTPA-223ENST00000452489 CCDC148Q8NFR7 591 aa21.21■□□□□ 0.99
PTPA-223ENST00000452489 GPATCH3Q96I76 525 aa21.21■□□□□ 0.99
PTPA-223ENST00000452489 SKAP2O75563 359 aaPredicted RBP21.2■□□□□ 0.98
PTPA-223ENST00000452489 ERCC3P19447 782 aa21.2■□□□□ 0.98
PTPA-223ENST00000452489 IRX1P78414 480 aaPredicted RBP21.2■□□□□ 0.98
PTPA-223ENST00000452489 TUBB2AQ13885 445 aa21.2■□□□□ 0.98
PTPA-223ENST00000452489 CRYMQ14894 314 aa21.2■□□□□ 0.98
PTPA-223ENST00000452489 NAPGQ99747 312 aaPredicted RBP21.2■□□□□ 0.98
PTPA-223ENST00000452489 TUBB2BQ9BVA1 445 aa21.2■□□□□ 0.98
PTPA-223ENST00000452489 TEX13AQ9BXU3 409 aaPredicted RBP21.2■□□□□ 0.98
PTPA-223ENST00000452489 PHAXQ9H814 394 aaKnown RBP21.2■□□□□ 0.98
PTPA-223ENST00000452489 MRPL12P52815 198 aaKnown RBP21.2■□□□□ 0.98
PTPA-223ENST00000452489 KCNG4Q8TDN1 519 aa21.2■□□□□ 0.98
PTPA-223ENST00000452489 C19orf44Q9H6X5 657 aa21.2■□□□□ 0.98
PTPA-223ENST00000452489 PA2G4Q9UQ80 394 aaKnown RBP21.2■□□□□ 0.98
PTPA-223ENST00000452489 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.2■□□□□ 0.98
PTPA-223ENST00000452489 HIP1O00291 1037 aa21.19■□□□□ 0.98
PTPA-223ENST00000452489 MEFVO15553 781 aaPredicted RBP21.19■□□□□ 0.98
PTPA-223ENST00000452489 RTN2O75298 545 aa21.19■□□□□ 0.98
PTPA-223ENST00000452489 TAF5LO75529 589 aa21.19■□□□□ 0.98
PTPA-223ENST00000452489 MYBL2P10244 700 aa21.19■□□□□ 0.98
PTPA-223ENST00000452489 HSP90AB4PQ58FF6 505 aa21.19■□□□□ 0.98
PTPA-223ENST00000452489 CEP57Q86XR8 500 aa21.19■□□□□ 0.98
PTPA-223ENST00000452489 NDUFAB1O14561 156 aa21.19■□□□□ 0.98
PTPA-223ENST00000452489 USP14P54578 494 aa21.19■□□□□ 0.98
PTPA-223ENST00000452489 IDI1Q13907 227 aa21.19■□□□□ 0.98
PTPA-223ENST00000452489 CPLX3Q8WVH0 158 aa21.19■□□□□ 0.98
PTPA-223ENST00000452489 CLNS1AP54105 237 aaKnown RBP21.18■□□□□ 0.98
PTPA-223ENST00000452489 OLFM4Q6UX06 510 aa21.18■□□□□ 0.98
PTPA-223ENST00000452489 DDX20Q9UHI6 824 aaKnown RBP21.18■□□□□ 0.98
PTPA-223ENST00000452489 LMTK2Q8IWU2 1503 aa21.18■□□□□ 0.98
PTPA-223ENST00000452489 ALDH1L1O75891 902 aa21.18■□□□□ 0.98
PTPA-223ENST00000452489 KRT32Q14532 448 aa21.18■□□□□ 0.98
PTPA-223ENST00000452489 CEP85LQ5SZL2 805 aa21.18■□□□□ 0.98
PTPA-223ENST00000452489 ACRBPQ8NEB7 543 aa21.18■□□□□ 0.98
PTPA-223ENST00000452489 BOLA2Q9H3K6 86 aa21.18■□□□□ 0.98
PTPA-223ENST00000452489 COL15A1P39059 1388 aa21.17■□□□□ 0.98
PTPA-223ENST00000452489 A1BGP04217 495 aa21.17■□□□□ 0.98
PTPA-223ENST00000452489 MARCKSP29966 332 aaPredicted RBP21.17■□□□□ 0.98
PTPA-223ENST00000452489 COG3Q96JB2 828 aa21.17■□□□□ 0.98
PTPA-223ENST00000452489 SELENOOQ9BVL4 669 aa21.17■□□□□ 0.98
PTPA-223ENST00000452489 MYO6Q9UM54 1294 aa21.17■□□□□ 0.98
PTPA-223ENST00000452489 SH3BP1Q9Y3L3 701 aa21.17■□□□□ 0.98
PTPA-223ENST00000452489 EME2A4GXA9 379 aaPredicted RBP21.17■□□□□ 0.98
PTPA-223ENST00000452489 GOLGA6BA6NDN3 693 aa21.17■□□□□ 0.98
PTPA-223ENST00000452489 AKR1B15C9JRZ8 316 aaPredicted RBP21.17■□□□□ 0.98
PTPA-223ENST00000452489 BMP6P22004 513 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms