RNA–Protein interactions for RNA: ENST00000447609.5

LMO3-209, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO3, Length 3,365 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-209ENST00000447609 CHAMP1Q96JM3 812 aa6.31□□□□□ -1.4
LMO3-209ENST00000447609 ANKRD2Q9GZV1 360 aa6.31□□□□□ -1.4
LMO3-209ENST00000447609 BICC1Q9H694 974 aaKnown RBP6.31□□□□□ -1.4
LMO3-209ENST00000447609 IL1RAPL2Q9NP60 686 aa6.31□□□□□ -1.4
LMO3-209ENST00000447609 GGA1Q9UJY5 639 aa6.31□□□□□ -1.4
LMO3-209ENST00000447609 CYP46A1Q9Y6A2 500 aa6.31□□□□□ -1.4
LMO3-209ENST00000447609 CCDC69A6NI79 296 aa6.31□□□□□ -1.4
LMO3-209ENST00000447609 PPEF1O14829 653 aaPredicted RBP6.31□□□□□ -1.4
LMO3-209ENST00000447609 GRIN3BO60391 1043 aa6.31□□□□□ -1.4
LMO3-209ENST00000447609 NBPF7P0C2Y1 421 aaPredicted RBP6.31□□□□□ -1.4
LMO3-209ENST00000447609 PSMA5P28066 241 aa6.31□□□□□ -1.4
LMO3-209ENST00000447609 DNM1Q05193 864 aaKnown RBP6.31□□□□□ -1.4
LMO3-209ENST00000447609 LRMPQ12912 555 aa6.31□□□□□ -1.4
LMO3-209ENST00000447609 SYNE4Q8N205 404 aa6.31□□□□□ -1.4
LMO3-209ENST00000447609 CACTINQ8WUQ7 758 aaKnown RBP6.31□□□□□ -1.4
LMO3-209ENST00000447609 PPM1EQ8WY54 764 aa6.31□□□□□ -1.4
LMO3-209ENST00000447609 ZNF594Q96JF6 807 aaPredicted RBP6.31□□□□□ -1.4
LMO3-209ENST00000447609 MKRN1Q9UHC7 482 aaKnown RBP6.31□□□□□ -1.4
LMO3-209ENST00000447609 CFAP45Q9UL16 551 aa6.31□□□□□ -1.4
LMO3-209ENST00000447609 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.31□□□□□ -1.4
LMO3-209ENST00000447609 ATP10DQ9P241 1426 aa6.3□□□□□ -1.4
LMO3-209ENST00000447609 GJB2P29033 226 aa6.3□□□□□ -1.4
LMO3-209ENST00000447609 LMOD1P29536 600 aaPredicted RBP6.3□□□□□ -1.4
LMO3-209ENST00000447609 SETQ01105 290 aaPredicted RBP6.3□□□□□ -1.4
LMO3-209ENST00000447609 WASHC4Q2M389 1173 aa6.3□□□□□ -1.4
LMO3-209ENST00000447609 BEND3Q5T5X7 828 aa6.3□□□□□ -1.4
LMO3-209ENST00000447609 VPS53Q5VIR6 699 aa6.3□□□□□ -1.4
LMO3-209ENST00000447609 LARP1BQ659C4 914 aaKnown RBP6.3□□□□□ -1.4
LMO3-209ENST00000447609 CCDC73Q6ZRK6 1079 aa6.3□□□□□ -1.4
LMO3-209ENST00000447609 AACSQ86V21 672 aa6.3□□□□□ -1.4
LMO3-209ENST00000447609 FBXO18Q8NFZ0 1043 aa6.3□□□□□ -1.4
LMO3-209ENST00000447609 GTF3C6Q969F1 213 aa6.3□□□□□ -1.4
LMO3-209ENST00000447609 NCAPGQ9BPX3 1015 aa6.3□□□□□ -1.4
LMO3-209ENST00000447609 L2HGDHQ9H9P8 463 aa6.3□□□□□ -1.4
LMO3-209ENST00000447609 ARFGAP3Q9NP61 516 aa6.3□□□□□ -1.4
LMO3-209ENST00000447609 IQSEC3Q9UPP2 1182 aaPredicted RBP6.3□□□□□ -1.4
LMO3-209ENST00000447609 EFCAB8A8MWE9 144 aa6.3□□□□□ -1.4
LMO3-209ENST00000447609 MYO1CO00159 1063 aa6.3□□□□□ -1.4
LMO3-209ENST00000447609 POLR3GO15318 223 aaPredicted RBP6.3□□□□□ -1.4
LMO3-209ENST00000447609 ZSCAN12O43309 604 aa6.3□□□□□ -1.4
LMO3-209ENST00000447609 ERLIN1O75477 346 aa6.3□□□□□ -1.4
LMO3-209ENST00000447609 BBOX1O75936 387 aa6.3□□□□□ -1.4
LMO3-209ENST00000447609 CASTP20810 708 aaKnown RBP6.3□□□□□ -1.4
LMO3-209ENST00000447609 SFPQP23246 707 aaKnown RBP eCLIP6.3□□□□□ -1.4
LMO3-209ENST00000447609 RBM26Q5T8P6 1007 aaKnown RBP6.3□□□□□ -1.4
LMO3-209ENST00000447609 C10orf67Q8IYJ2 551 aa6.3□□□□□ -1.4
LMO3-209ENST00000447609 ZFP91Q96JP5 570 aaPredicted RBP6.3□□□□□ -1.4
LMO3-209ENST00000447609 TRERF1Q96PN7 1200 aa6.3□□□□□ -1.4
LMO3-209ENST00000447609 TM6SF1Q9BZW5 370 aa6.3□□□□□ -1.4
LMO3-209ENST00000447609 STAP2Q9UGK3 403 aa6.3□□□□□ -1.4
LMO3-209ENST00000447609 PA2G4Q9UQ80 394 aaKnown RBP6.3□□□□□ -1.4
LMO3-209ENST00000447609 PHLPP2Q6ZVD8 1323 aa6.3□□□□□ -1.4
LMO3-209ENST00000447609 RAB11FIP3O75154 756 aa6.29□□□□□ -1.4
LMO3-209ENST00000447609 SMC2O95347 1197 aa6.29□□□□□ -1.4
LMO3-209ENST00000447609 FKBP4Q02790 459 aaKnown RBP eCLIP6.29□□□□□ -1.4
LMO3-209ENST00000447609 LRRFIP1Q32MZ4 808 aaKnown RBP6.29□□□□□ -1.4
LMO3-209ENST00000447609 ERCC4Q92889 916 aaPredicted RBP6.29□□□□□ -1.4
LMO3-209ENST00000447609 GBP3Q9H0R5 595 aa6.29□□□□□ -1.4
LMO3-209ENST00000447609 SEC31BQ9NQW1 1179 aa6.29□□□□□ -1.4
LMO3-209ENST00000447609 PDRG1Q9NUG6 133 aa6.29□□□□□ -1.4
LMO3-209ENST00000447609 DACT1Q9NYF0 836 aa6.29□□□□□ -1.4
LMO3-209ENST00000447609 MTMR6Q9Y217 621 aa6.29□□□□□ -1.4
LMO3-209ENST00000447609 ABCA3Q99758 1704 aa6.29□□□□□ -1.4
LMO3-209ENST00000447609 MARF1Q9Y4F3 1742 aaKnown RBP6.29□□□□□ -1.4
LMO3-209ENST00000447609 COL18A1P39060 1754 aa6.29□□□□□ -1.4
LMO3-209ENST00000447609 DHX16O60231 1041 aaKnown RBP6.29□□□□□ -1.4
LMO3-209ENST00000447609 TUBBP07437 444 aa6.29□□□□□ -1.4
LMO3-209ENST00000447609 BRD2P25440 801 aaKnown RBP6.29□□□□□ -1.4
LMO3-209ENST00000447609 HSP90B2PQ58FF3 399 aa6.29□□□□□ -1.4
LMO3-209ENST00000447609 CC2D2BQ6DHV5 1058 aa6.29□□□□□ -1.4
LMO3-209ENST00000447609 RBM43Q6ZSC3 357 aaKnown RBP6.29□□□□□ -1.4
LMO3-209ENST00000447609 ZNF34Q8IZ26 560 aa6.29□□□□□ -1.4
LMO3-209ENST00000447609 OGFOD1Q8N543 542 aa6.29□□□□□ -1.4
LMO3-209ENST00000447609 IQUBQ8NA54 791 aa6.29□□□□□ -1.4
LMO3-209ENST00000447609 OTUD7AQ8TE49 926 aaPredicted RBP6.29□□□□□ -1.4
LMO3-209ENST00000447609 ISCA1Q9BUE6 129 aa6.29□□□□□ -1.4
LMO3-209ENST00000447609 TAOK3Q9H2K8 898 aa6.29□□□□□ -1.4
LMO3-209ENST00000447609 GREM2Q9H772 168 aa6.29□□□□□ -1.4
LMO3-209ENST00000447609 TMOD2Q9NZR1 351 aa6.29□□□□□ -1.4
LMO3-209ENST00000447609 RAI14Q9P0K7 980 aa6.29□□□□□ -1.4
LMO3-209ENST00000447609 LRP2BPQ9P2M1 347 aa6.29□□□□□ -1.4
LMO3-209ENST00000447609 DNAI1Q9UI46 699 aa6.29□□□□□ -1.4
LMO3-209ENST00000447609 F8W031 263 aaPredicted RBP6.29□□□□□ -1.4
LMO3-209ENST00000447609 HIP1O00291 1037 aa6.29□□□□□ -1.4
LMO3-209ENST00000447609 KINO60870 393 aaKnown RBP6.29□□□□□ -1.4
LMO3-209ENST00000447609 TAF5LO75529 589 aa6.29□□□□□ -1.4
LMO3-209ENST00000447609 IL15P40933 162 aaPredicted RBP6.29□□□□□ -1.4
LMO3-209ENST00000447609 MAGEA9P43362 315 aa6.29□□□□□ -1.4
LMO3-209ENST00000447609 AK2P54819 239 aa6.29□□□□□ -1.4
LMO3-209ENST00000447609 PDIA6Q15084 440 aa6.29□□□□□ -1.4
LMO3-209ENST00000447609 SYT10Q6XYQ8 523 aa6.29□□□□□ -1.4
LMO3-209ENST00000447609 ZNF804AQ7Z570 1209 aa6.29□□□□□ -1.4
LMO3-209ENST00000447609 GPR161Q8N6U8 529 aaKnown RBP6.29□□□□□ -1.4
LMO3-209ENST00000447609 KLHDC4Q8TBB5 520 aa6.29□□□□□ -1.4
LMO3-209ENST00000447609 DDX11Q96FC9 970 aa6.29□□□□□ -1.4
LMO3-209ENST00000447609 CCDC8Q9H0W5 538 aaPredicted RBP6.29□□□□□ -1.4
LMO3-209ENST00000447609 RNF181Q9P0P0 153 aa6.29□□□□□ -1.4
LMO3-209ENST00000447609 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.29□□□□□ -1.4
LMO3-209ENST00000447609 RRP15Q9Y3B9 282 aaKnown RBP6.29□□□□□ -1.4
LMO3-209ENST00000447609 CD2APQ9Y5K6 639 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 130.1 ms