RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 SIK1P57059 783 aa7.41□□□□□ -1.22
SDCBP-205ENST00000447267 CTBSQ01459 385 aa7.41□□□□□ -1.22
SDCBP-205ENST00000447267 DEFB123Q8N688 67 aa7.41□□□□□ -1.22
SDCBP-205ENST00000447267 KCNH5Q8NCM2 988 aa7.41□□□□□ -1.22
SDCBP-205ENST00000447267 ZNF408Q9H9D4 720 aa7.41□□□□□ -1.22
SDCBP-205ENST00000447267 STXBP5LQ9Y2K9 1186 aa7.41□□□□□ -1.22
SDCBP-205ENST00000447267 RTCBQ9Y3I0 505 aaKnown RBP7.41□□□□□ -1.22
SDCBP-205ENST00000447267 TIAM2Q8IVF5 1701 aa7.41□□□□□ -1.22
SDCBP-205ENST00000447267 MKI67P46013 3256 aaKnown RBP7.4□□□□□ -1.22
SDCBP-205ENST00000447267 RNF225M0QZC1 329 aaPredicted RBP7.4□□□□□ -1.22
SDCBP-205ENST00000447267 HOXB4P17483 251 aaPredicted RBP7.4□□□□□ -1.22
SDCBP-205ENST00000447267 SNRPNP63162 240 aaKnown RBP7.4□□□□□ -1.22
SDCBP-205ENST00000447267 NCOA4Q13772 614 aa7.4□□□□□ -1.22
SDCBP-205ENST00000447267 FBXO46Q6PJ61 603 aaPredicted RBP7.4□□□□□ -1.22
SDCBP-205ENST00000447267 C2CD5Q86YS7 1000 aa7.4□□□□□ -1.22
SDCBP-205ENST00000447267 ZDHHC1Q8WTX9 485 aa7.4□□□□□ -1.22
SDCBP-205ENST00000447267 SMARCC1Q92922 1105 aaPredicted RBP7.4□□□□□ -1.22
SDCBP-205ENST00000447267 OXCT2Q9BYC2 517 aaPredicted RBP7.4□□□□□ -1.22
SDCBP-205ENST00000447267 KIAA1024Q9UPX6 916 aa7.4□□□□□ -1.22
SDCBP-205ENST00000447267 RGPD5Q99666 1765 aa7.4□□□□□ -1.23
SDCBP-205ENST00000447267 C4AP0C0L4 1744 aa7.39□□□□□ -1.23
SDCBP-205ENST00000447267 TMEM265A0A087WTH1 108 aa7.39□□□□□ -1.23
SDCBP-205ENST00000447267 A6NJY4 79 aa7.39□□□□□ -1.23
SDCBP-205ENST00000447267 POLRMTO00411 1230 aaKnown RBP7.39□□□□□ -1.23
SDCBP-205ENST00000447267 CDK2AP1O14519 115 aa7.39□□□□□ -1.23
SDCBP-205ENST00000447267 EPHA4P54764 986 aa7.39□□□□□ -1.23
SDCBP-205ENST00000447267 GTF2IP78347 998 aa7.39□□□□□ -1.23
SDCBP-205ENST00000447267 LBRQ14739 615 aaKnown RBP7.39□□□□□ -1.23
SDCBP-205ENST00000447267 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.39□□□□□ -1.23
SDCBP-205ENST00000447267 ZNF296Q8WUU4 475 aaPredicted RBP7.39□□□□□ -1.23
SDCBP-205ENST00000447267 PIGBQ92521 554 aa7.39□□□□□ -1.23
SDCBP-205ENST00000447267 NIFKQ9BYG3 293 aaKnown RBP7.39□□□□□ -1.23
SDCBP-205ENST00000447267 ZNF358Q9NW07 568 aa7.39□□□□□ -1.23
SDCBP-205ENST00000447267 UBR3Q6ZT12 1888 aa7.38□□□□□ -1.23
SDCBP-205ENST00000447267 USP17L5A8MUK1 530 aa7.38□□□□□ -1.23
SDCBP-205ENST00000447267 FAM155AB1AL88 458 aaPredicted RBP7.38□□□□□ -1.23
SDCBP-205ENST00000447267 GTF2E1P29083 439 aaPredicted RBP7.38□□□□□ -1.23
SDCBP-205ENST00000447267 FOXK2Q01167 660 aa7.38□□□□□ -1.23
SDCBP-205ENST00000447267 DLK2Q6UY11 383 aa7.38□□□□□ -1.23
SDCBP-205ENST00000447267 TBC1D9Q6ZT07 1266 aa7.38□□□□□ -1.23
SDCBP-205ENST00000447267 NFATC2IPQ8NCF5 419 aa7.38□□□□□ -1.23
SDCBP-205ENST00000447267 ZNF622Q969S3 477 aaKnown RBP eCLIP7.38□□□□□ -1.23
SDCBP-205ENST00000447267 SCARF2Q96GP6 870 aaPredicted RBP7.38□□□□□ -1.23
SDCBP-205ENST00000447267 HHIPL1Q96JK4 782 aa7.38□□□□□ -1.23
SDCBP-205ENST00000447267 CSRNP1Q96S65 589 aa7.38□□□□□ -1.23
SDCBP-205ENST00000447267 ZCCHC2Q9C0B9 1178 aaKnown RBP7.38□□□□□ -1.23
SDCBP-205ENST00000447267 TAOK3Q9H2K8 898 aa7.38□□□□□ -1.23
SDCBP-205ENST00000447267 ATXN7L1Q9ULK2 861 aaPredicted RBP7.38□□□□□ -1.23
SDCBP-205ENST00000447267 DNMT3AQ9Y6K1 912 aaPredicted RBP7.38□□□□□ -1.23
SDCBP-205ENST00000447267 DOT1LQ8TEK3 1739 aa7.38□□□□□ -1.23
SDCBP-205ENST00000447267 ZBTB7BO15156 539 aaPredicted RBP7.37□□□□□ -1.23
SDCBP-205ENST00000447267 TBC1D8O95759 1140 aa7.37□□□□□ -1.23
SDCBP-205ENST00000447267 TXLNAP40222 546 aa7.37□□□□□ -1.23
SDCBP-205ENST00000447267 EPS15P42566 896 aa7.37□□□□□ -1.23
SDCBP-205ENST00000447267 MAP2K3P46734 347 aa7.37□□□□□ -1.23
SDCBP-205ENST00000447267 HUNKP57058 714 aa7.37□□□□□ -1.23
SDCBP-205ENST00000447267 SRPK2P78362 688 aaKnown RBP7.37□□□□□ -1.23
SDCBP-205ENST00000447267 MAP3K12Q12852 859 aa7.37□□□□□ -1.23
SDCBP-205ENST00000447267 EML3Q32P44 896 aa7.37□□□□□ -1.23
SDCBP-205ENST00000447267 SH3PXD2AQ5TCZ1 1133 aa7.37□□□□□ -1.23
SDCBP-205ENST00000447267 KANK3Q6NY19 840 aa7.37□□□□□ -1.23
SDCBP-205ENST00000447267 PGBD3Q8N328 593 aa7.37□□□□□ -1.23
SDCBP-205ENST00000447267 GLIS2Q9BZE0 524 aaPredicted RBP7.37□□□□□ -1.23
SDCBP-205ENST00000447267 PRO3102Q9H379 93 aa7.37□□□□□ -1.23
SDCBP-205ENST00000447267 MTMR10Q9NXD2 777 aa7.37□□□□□ -1.23
SDCBP-205ENST00000447267 CABP1Q9NZU7 370 aa7.37□□□□□ -1.23
SDCBP-205ENST00000447267 SCHIP1Q9P0W5 487 aaPredicted RBP7.37□□□□□ -1.23
SDCBP-205ENST00000447267 ASAP1Q9ULH1 1129 aa7.37□□□□□ -1.23
SDCBP-205ENST00000447267 LOC100996750A0A140TA64 210 aa7.36□□□□□ -1.23
SDCBP-205ENST00000447267 A0A1W2PNR3 127 aa7.36□□□□□ -1.23
SDCBP-205ENST00000447267 H0YIN7 160 aa7.36□□□□□ -1.23
SDCBP-205ENST00000447267 FGFR3P22607 806 aa7.36□□□□□ -1.23
SDCBP-205ENST00000447267 TM4SF1P30408 202 aa7.36□□□□□ -1.23
SDCBP-205ENST00000447267 CLDN10P78369 228 aa7.36□□□□□ -1.23
SDCBP-205ENST00000447267 EFHC2Q5JST6 749 aa7.36□□□□□ -1.23
SDCBP-205ENST00000447267 TBCELQ5QJ74 424 aa7.36□□□□□ -1.23
SDCBP-205ENST00000447267 NEDD1Q8NHV4 660 aa7.36□□□□□ -1.23
SDCBP-205ENST00000447267 C7orf43Q8WVR3 580 aa7.36□□□□□ -1.23
SDCBP-205ENST00000447267 CLUAP1Q96AJ1 413 aa7.36□□□□□ -1.23
SDCBP-205ENST00000447267 KRTAP4-6Q9BYQ5 205 aa7.36□□□□□ -1.23
SDCBP-205ENST00000447267 KLF15Q9UIH9 416 aa7.36□□□□□ -1.23
SDCBP-205ENST00000447267 NOD1Q9Y239 953 aa7.36□□□□□ -1.23
SDCBP-205ENST00000447267 ADAMTSL1Q8N6G6 1762 aa7.36□□□□□ -1.23
SDCBP-205ENST00000447267 HDGFL1Q5TGJ6 251 aa7.35□□□□□ -1.23
SDCBP-205ENST00000447267 GPAT2Q6NUI2 795 aa7.35□□□□□ -1.23
SDCBP-205ENST00000447267 ALYREFQ86V81 257 aaKnown RBP7.35□□□□□ -1.23
SDCBP-205ENST00000447267 GALNT6Q8NCL4 622 aa7.35□□□□□ -1.23
SDCBP-205ENST00000447267 ENAMQ9NRM1 1142 aa7.35□□□□□ -1.23
SDCBP-205ENST00000447267 PHF24Q9UPV7 400 aa7.35□□□□□ -1.23
SDCBP-205ENST00000447267 ROCK1Q13464 1354 aa7.34□□□□□ -1.23
SDCBP-205ENST00000447267 CCDC88AQ3V6T2 1871 aa7.34□□□□□ -1.23
SDCBP-205ENST00000447267 TAF1LQ8IZX4 1826 aa7.34□□□□□ -1.23
SDCBP-205ENST00000447267 TTC21BQ7Z4L5 1316 aa7.34□□□□□ -1.23
SDCBP-205ENST00000447267 DCDC2BA2VCK2 349 aa7.34□□□□□ -1.23
SDCBP-205ENST00000447267 USP17L3A6NCW0 530 aa7.34□□□□□ -1.23
SDCBP-205ENST00000447267 USP17L4A6NCW7 530 aa7.34□□□□□ -1.23
SDCBP-205ENST00000447267 RPS6KA4O75676 772 aa7.34□□□□□ -1.23
SDCBP-205ENST00000447267 DKK1O94907 266 aa7.34□□□□□ -1.23
SDCBP-205ENST00000447267 BMP4P12644 408 aa7.34□□□□□ -1.23
SDCBP-205ENST00000447267 TNP2Q05952 138 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms