RNA–Protein interactions for RNA: ENST00000446404.1

AP000402.1-201, humanhuman

TSL 3 BASIC

Gene AP000402.1, Length 540 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000402.1-201ENST00000446404 KRT82Q9NSB4 513 aa10.16□□□□□ -0.78
AP000402.1-201ENST00000446404 CACNA2D2Q9NY47 1150 aa10.16□□□□□ -0.78
AP000402.1-201ENST00000446404 INPP5FQ9Y2H2 1132 aa10.16□□□□□ -0.78
AP000402.1-201ENST00000446404 SUPT16HQ9Y5B9 1047 aaKnown RBP10.16□□□□□ -0.78
AP000402.1-201ENST00000446404 LOC100289279A0A1B0GTE1 492 aa10.15□□□□□ -0.78
AP000402.1-201ENST00000446404 CTSBP07858 339 aa10.15□□□□□ -0.78
AP000402.1-201ENST00000446404 PAK2Q13177 524 aa10.15□□□□□ -0.78
AP000402.1-201ENST00000446404 MAP1SQ66K74 1059 aaPredicted RBP10.15□□□□□ -0.78
AP000402.1-201ENST00000446404 KCNB2Q92953 911 aa10.15□□□□□ -0.78
AP000402.1-201ENST00000446404 GAL3ST3Q96A11 431 aa10.15□□□□□ -0.78
AP000402.1-201ENST00000446404 FAM229AH3BQW9 127 aa10.14□□□□□ -0.79
AP000402.1-201ENST00000446404 GREM1O60565 184 aa10.14□□□□□ -0.79
AP000402.1-201ENST00000446404 ELNP15502 786 aa10.14□□□□□ -0.79
AP000402.1-201ENST00000446404 GJA8P48165 433 aa10.14□□□□□ -0.79
AP000402.1-201ENST00000446404 GNL2Q13823 731 aaKnown RBP10.14□□□□□ -0.79
AP000402.1-201ENST00000446404 SEPT6Q14141 434 aa10.14□□□□□ -0.79
AP000402.1-201ENST00000446404 PRRT3Q5FWE3 981 aa10.14□□□□□ -0.79
AP000402.1-201ENST00000446404 HP1BP3Q5SSJ5 553 aaPredicted RBP10.14□□□□□ -0.79
AP000402.1-201ENST00000446404 GOLM1Q8NBJ4 401 aa10.14□□□□□ -0.79
AP000402.1-201ENST00000446404 ZC3H12CQ9C0D7 883 aaKnown RBP10.14□□□□□ -0.79
AP000402.1-201ENST00000446404 CCDC86Q9H6F5 360 aaKnown RBP10.14□□□□□ -0.79
AP000402.1-201ENST00000446404 MPRIPQ6WCQ1 1025 aa10.13□□□□□ -0.79
AP000402.1-201ENST00000446404 SLC43A3Q8NBI5 491 aa10.13□□□□□ -0.79
AP000402.1-201ENST00000446404 UBASH3BQ8TF42 649 aa10.13□□□□□ -0.79
AP000402.1-201ENST00000446404 NT5C1AQ9BXI3 368 aa10.13□□□□□ -0.79
AP000402.1-201ENST00000446404 F13A1P00488 732 aa10.12□□□□□ -0.79
AP000402.1-201ENST00000446404 HNRNPUQ00839 825 aaKnown RBP eCLIP10.12□□□□□ -0.79
AP000402.1-201ENST00000446404 PDE3AQ14432 1141 aa10.12□□□□□ -0.79
AP000402.1-201ENST00000446404 DUOXA2Q1HG44 320 aa10.12□□□□□ -0.79
AP000402.1-201ENST00000446404 BNC2Q6ZN30 1099 aaPredicted RBP10.12□□□□□ -0.79
AP000402.1-201ENST00000446404 FAM196AQ6ZSG2 479 aa10.12□□□□□ -0.79
AP000402.1-201ENST00000446404 GPBAR1Q8TDU6 330 aa10.12□□□□□ -0.79
AP000402.1-201ENST00000446404 GPRASP2Q96D09 838 aa10.12□□□□□ -0.79
AP000402.1-201ENST00000446404 SCARF2Q96GP6 870 aaPredicted RBP10.12□□□□□ -0.79
AP000402.1-201ENST00000446404 EAF1Q96JC9 268 aaPredicted RBP10.12□□□□□ -0.79
AP000402.1-201ENST00000446404 WISP1O95388 367 aa10.11□□□□□ -0.79
AP000402.1-201ENST00000446404 DLGAP3O95886 979 aa10.11□□□□□ -0.79
AP000402.1-201ENST00000446404 PTPN11Q06124 597 aaPredicted RBP10.11□□□□□ -0.79
AP000402.1-201ENST00000446404 IGF2-ASQ6U949 168 aa10.11□□□□□ -0.79
AP000402.1-201ENST00000446404 RASGRP4Q8TDF6 673 aa10.11□□□□□ -0.79
AP000402.1-201ENST00000446404 GATAD2BQ8WXI9 593 aa10.11□□□□□ -0.79
AP000402.1-201ENST00000446404 JARID2Q92833 1246 aaPredicted RBP10.11□□□□□ -0.79
AP000402.1-201ENST00000446404 FAM221AA4D161 298 aa10.1□□□□□ -0.79
AP000402.1-201ENST00000446404 ZNF862O60290 1169 aa10.1□□□□□ -0.79
AP000402.1-201ENST00000446404 DIEXFQ68CQ4 756 aaKnown RBP10.1□□□□□ -0.79
AP000402.1-201ENST00000446404 ACSBG1Q96GR2 724 aa10.1□□□□□ -0.79
AP000402.1-201ENST00000446404 SPATA32Q96LK8 384 aa10.1□□□□□ -0.79
AP000402.1-201ENST00000446404 LRRC3Q9BY71 257 aa10.1□□□□□ -0.79
AP000402.1-201ENST00000446404 MRPL18Q9H0U6 180 aaKnown RBP10.1□□□□□ -0.79
AP000402.1-201ENST00000446404 ROBO2Q9HCK4 1378 aa10.1□□□□□ -0.79
AP000402.1-201ENST00000446404 CILPO75339 1184 aa10.09□□□□□ -0.79
AP000402.1-201ENST00000446404 SPATA31C1P0DKV0 1188 aa10.09□□□□□ -0.79
AP000402.1-201ENST00000446404 KIF4BQ2VIQ3 1234 aa10.09□□□□□ -0.79
AP000402.1-201ENST00000446404 UBP1Q9NZI7 540 aa10.09□□□□□ -0.79
AP000402.1-201ENST00000446404 LIG1P18858 919 aa10.08□□□□□ -0.8
AP000402.1-201ENST00000446404 APOBRQ0VD83 1088 aa10.08□□□□□ -0.8
AP000402.1-201ENST00000446404 MPP2Q14168 576 aa10.08□□□□□ -0.8
AP000402.1-201ENST00000446404 EXOSC6Q5RKV6 272 aaKnown RBP10.08□□□□□ -0.8
AP000402.1-201ENST00000446404 KIAA1211Q6ZU35 1233 aa10.08□□□□□ -0.8
AP000402.1-201ENST00000446404 ACAD11Q709F0 780 aa10.08□□□□□ -0.8
AP000402.1-201ENST00000446404 WDR89Q96FK6 387 aaPredicted RBP10.08□□□□□ -0.8
AP000402.1-201ENST00000446404 RUSC1Q9BVN2 902 aa10.08□□□□□ -0.8
AP000402.1-201ENST00000446404 PCDHA4Q9UN74 947 aa10.08□□□□□ -0.8
AP000402.1-201ENST00000446404 MEGF11A6BM72 1044 aa10.07□□□□□ -0.8
AP000402.1-201ENST00000446404 COL8A1P27658 744 aa10.07□□□□□ -0.8
AP000402.1-201ENST00000446404 CRKP46108 304 aa10.07□□□□□ -0.8
AP000402.1-201ENST00000446404 GRIK4Q16099 956 aa10.07□□□□□ -0.8
AP000402.1-201ENST00000446404 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.07□□□□□ -0.8
AP000402.1-201ENST00000446404 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.07□□□□□ -0.8
AP000402.1-201ENST00000446404 GMLQ99445 158 aa10.07□□□□□ -0.8
AP000402.1-201ENST00000446404 WDR18Q9BV38 432 aa10.07□□□□□ -0.8
AP000402.1-201ENST00000446404 TMPRSS13Q9BYE2 586 aa10.07□□□□□ -0.8
AP000402.1-201ENST00000446404 SYNGAP1Q96PV0 1343 aa10.07□□□□□ -0.8
AP000402.1-201ENST00000446404 AOC2O75106 756 aa10.06□□□□□ -0.8
AP000402.1-201ENST00000446404 BPNT1O95861 308 aa10.06□□□□□ -0.8
AP000402.1-201ENST00000446404 SELPP16109 830 aa10.06□□□□□ -0.8
AP000402.1-201ENST00000446404 RPL6Q02878 288 aaKnown RBP10.06□□□□□ -0.8
AP000402.1-201ENST00000446404 SHISA2Q6UWI4 295 aa10.06□□□□□ -0.8
AP000402.1-201ENST00000446404 VPS37DQ86XT2 251 aa10.06□□□□□ -0.8
AP000402.1-201ENST00000446404 FBXO27Q8NI29 283 aa10.06□□□□□ -0.8
AP000402.1-201ENST00000446404 SREK1Q8WXA9 508 aaKnown RBP10.06□□□□□ -0.8
AP000402.1-201ENST00000446404 RNF208Q9H0X6 261 aa10.06□□□□□ -0.8
AP000402.1-201ENST00000446404 TLR3O15455 904 aaKnown RBP10.05□□□□□ -0.8
AP000402.1-201ENST00000446404 REC114Q7Z4M0 266 aa10.05□□□□□ -0.8
AP000402.1-201ENST00000446404 SLITRK4Q8IW52 837 aa10.05□□□□□ -0.8
AP000402.1-201ENST00000446404 TMEM130Q8N3G9 435 aa10.05□□□□□ -0.8
AP000402.1-201ENST00000446404 NKD1Q969G9 470 aa10.05□□□□□ -0.8
AP000402.1-201ENST00000446404 PCDHGC5Q9Y5F6 944 aa10.05□□□□□ -0.8
AP000402.1-201ENST00000446404 FAM181BA6NEQ2 426 aa10.04□□□□□ -0.8
AP000402.1-201ENST00000446404 F8W735 103 aaPredicted RBP10.04□□□□□ -0.8
AP000402.1-201ENST00000446404 SLFN14P0C7P3 912 aa10.04□□□□□ -0.8
AP000402.1-201ENST00000446404 ATF4P18848 351 aaPredicted RBP10.04□□□□□ -0.8
AP000402.1-201ENST00000446404 ARID5AQ03989 594 aa10.04□□□□□ -0.8
AP000402.1-201ENST00000446404 COL9A2Q14055 689 aaPredicted RBP10.04□□□□□ -0.8
AP000402.1-201ENST00000446404 SF3A1Q15459 793 aaKnown RBP10.04□□□□□ -0.8
AP000402.1-201ENST00000446404 CWF19L2Q2TBE0 894 aaKnown RBP10.04□□□□□ -0.8
AP000402.1-201ENST00000446404 ALYREFQ86V81 257 aaKnown RBP10.04□□□□□ -0.8
AP000402.1-201ENST00000446404 LENG1Q96BZ8 264 aaPredicted RBP10.04□□□□□ -0.8
AP000402.1-201ENST00000446404 SEC16BQ96JE7 1060 aa10.04□□□□□ -0.8
AP000402.1-201ENST00000446404 NACC1Q96RE7 527 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms